2016-05-24 19:46:13 +02:00
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---
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2016-05-26 19:28:38 +02:00
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title: "BLAS libraries benchmarks"
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2016-05-24 19:46:13 +02:00
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author: "Andrzej Wójtowicz"
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2016-05-26 19:28:38 +02:00
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output:
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html_document:
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keep_md: yes
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2016-05-24 19:46:13 +02:00
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---
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2016-05-26 19:28:38 +02:00
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Document generation date: `r Sys.time()`
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2016-05-24 19:46:13 +02:00
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2016-05-25 16:26:48 +02:00
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```{r checkpoint, echo=FALSE, warning=FALSE, message=FALSE}
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2016-05-24 19:46:13 +02:00
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library(checkpoint)
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checkpoint("2016-04-01", scanForPackages=FALSE, verbose=FALSE)
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library(reshape2)
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2016-05-25 16:26:48 +02:00
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library(dplyr)
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library(ggplot2)
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2016-05-26 02:19:58 +02:00
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library(RColorBrewer)
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2016-05-24 19:46:13 +02:00
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```
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2016-05-26 19:28:38 +02:00
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## Table of Contents
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1. [Configuration](#configuration)
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2. [Results per host](#results-per-host)
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2016-05-26 19:39:26 +02:00
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* [Intel Core i5-4590 + NVIDIA GeForce GT 430](#intel-core-i5-4590--nvidia-geforce-gt-430)
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2016-05-31 00:00:52 +02:00
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* [Intel Core i5-4590 + NVIDIA GeForce GTX 750 Ti](#intel-core-i5-4590--nvidia-geforce-gtx-750-ti)
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2016-05-26 19:28:38 +02:00
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* [Intel Core i5-3570](#intel-core-i5-3570)
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* [Intel Core i3-2120](#intel-core-i3-2120)
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* [Intel Core i3-3120M](#intel-core-i3-3120m)
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2016-05-29 17:45:39 +02:00
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* [Intel Core i5-3317U + NVIDIA GeForce GT 630M](#intel-core-i5-3317u--nvidia-geforce-gt-630m)
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2016-05-26 19:28:38 +02:00
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3. [Results per library](#results-per-library)
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* [Netlib](#netlib)
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* [Atlas (st)](#atlas-st)
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* [OpenBLAS](#openblas)
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* [Atlas (mt)](#atlas-mt)
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* [GotoBLAS2](#gotoblas2)
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* [MKL](#mkl)
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* [BLIS](#blis)
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2016-05-29 17:45:39 +02:00
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* [cuBLAS](#cublas)
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2016-05-26 19:28:38 +02:00
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***
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## Configuration
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2016-05-31 00:00:52 +02:00
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**R software**: [Microsoft R Open](https://mran.microsoft.com/open/) (3.2.4).
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2016-05-26 19:28:38 +02:00
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**Libraries**:
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|CPU (single-threaded)|CPU (multi-threaded)|GPU|
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2016-05-31 00:00:52 +02:00
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|[Netlib](http://www.netlib.org/) (debian package, blas 1.2.20110419, lapack 3.5.0)|[OpenBLAS](http://www.openblas.net/) (debian package, 0.2.12)|[NVIDIA cuBLAS](https://developer.nvidia.com/cublas) (NVBLAS 6.5 + Intel MKL)|
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|[ATLAS](http://math-atlas.sourceforge.net/) (debian package, 3.10.2)|[ATLAS](http://math-atlas.sourceforge.net/) (dev branch, 3.11.38)| |
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| |[GotoBLAS2](https://prs.ism.ac.jp/~nakama/SurviveGotoBLAS2/) (Survive fork, 3.141)| |
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| |[Intel MKL](https://mran.microsoft.com/download/) (part of RevoMath package, 3.2.4)| |
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| |[BLIS](https://github.com/flame/blis) (dev branch, 0.2.0+/17.05.2016)| |
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2016-05-26 19:28:38 +02:00
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**Hosts**:
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|No.|CPU|GPU|
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|1.|[Intel Core i5-4590](http://ark.intel.com/products/80815/Intel-Core-i5-4590-Processor-6M-Cache-up-to-3_70-GHz)|[NVIDIA GeForce GT 430](http://www.geforce.com/hardware/desktop-gpus/geforce-gt-430/specifications)|
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2016-05-31 00:00:52 +02:00
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|2.|[Intel Core i5-4590](http://ark.intel.com/products/80815/Intel-Core-i5-4590-Processor-6M-Cache-up-to-3_70-GHz)|[NVIDIA GeForce GTX 750 Ti](http://www.geforce.com/hardware/desktop-gpus/geforce-gtx-750-ti/specifications)|
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|3.|[Intel Core i5-3570](http://ark.intel.com/products/65702/Intel-Core-i5-3570-Processor-6M-Cache-up-to-3_80-GHz)| - |
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|4.|[Intel Core i3-2120](http://ark.intel.com/products/53426/Intel-Core-i3-2120-Processor-3M-Cache-3_30-GHz)| - |
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|5.|[Intel Core i3-3120M](http://ark.intel.com/products/71465/Intel-Core-i3-3120M-Processor-3M-Cache-2_50-GHz)| - |
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|6.|[Intel Core i5-3317U](http://ark.intel.com/products/65707/Intel-Core-i5-3317U-Processor-3M-Cache-up-to-2_60-GHz)|[NVIDIA GeForce GT 630M](http://www.geforce.com/hardware/notebook-gpus/geforce-gt-630m/specifications)|
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2016-05-26 19:28:38 +02:00
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**Benchmarks**: [Urbanek](http://r.research.att.com/benchmarks/R-benchmark-25.R), [Revolution](https://gist.github.com/andrie/24c9672f1ea39af89c66#file-rro-mkl-benchmark-r), [Gcbd](https://cran.r-project.org/web/packages/gcbd/vignettes/gcbd.pdf).
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2016-05-25 16:26:48 +02:00
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```{r config, echo=FALSE}
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2016-05-24 19:46:13 +02:00
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HOSTNAMES = suppressWarnings(readLines("hosts-list.txt"))
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BENCHMARKS = c("urbanek",
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"revolution",
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"gcbd")
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LIBRARIES = c("netlib",
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"atlas_st",
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"openblas",
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"atlas_mt",
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"gotoblas2",
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"mkl",
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"blis",
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"cublas")
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2016-05-25 16:26:48 +02:00
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LIBRARY.REF = "netlib"
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2016-05-26 19:28:38 +02:00
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HOST.REF = "Intel Core i3-3120M"
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HOST.REF.GPU = "NVIDIA GeForce GT 430"
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2016-05-25 16:26:48 +02:00
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2016-05-24 19:46:13 +02:00
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HOST.INFO.PATTERN = "host-info-<HOST>.log"
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BENCHMKAR.PATTERN = "test-<BENCHMARK>-<HOST>-<LIBRARY>.rds"
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RESULTS.DIR = "results"
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2016-05-25 16:26:48 +02:00
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GEN.DIR = "gen"
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DATA.DIR = file.path(GEN.DIR, "data")
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IMAGES.DIR = file.path(GEN.DIR, "img")
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2016-05-24 19:46:13 +02:00
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```
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2016-05-25 16:26:48 +02:00
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```{r read-write-data, echo=FALSE}
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for (d in c(GEN.DIR, DATA.DIR, IMAGES.DIR))
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if (!dir.exists(d))
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dir.create(d)
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2016-05-24 19:46:13 +02:00
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hosts.info = data.frame(Host=character(), CPU=character(), GPU=character())
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for (hostname in HOSTNAMES)
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{
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fp = file.path(RESULTS.DIR, gsub("<HOST>", hostname, HOST.INFO.PATTERN))
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if (file.exists(fp))
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{
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dr = readLines(fp)
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dr = unname(sapply(dr, trimws))
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hosts.info = rbind(hosts.info,
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2016-05-25 16:26:48 +02:00
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data.frame(Host= hostname,
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CPU = gsub("\\(.*?\\)", "", dr[1]),
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GPU = ifelse(length(dr)==3,
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gsub("(NVIDIA).*\\[(.*)\\]", "\\1 \\2", dr[3]), NA)))
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2016-05-25 13:34:12 +02:00
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} else {
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warning(paste("File", fp, "does not exist"))
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2016-05-24 19:46:13 +02:00
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}
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}
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2016-05-25 16:26:48 +02:00
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saveRDS(hosts.info, file.path(DATA.DIR, "hosts.info.rds"))
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2016-05-24 19:46:13 +02:00
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benchmark.results = data.frame(Host=character(), Benchmark=character(),
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Library=character(), Test=character(),
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Runs=integer(), Size=integer(),
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Time=numeric())
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for (host in hosts.info$Host)
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{
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for (benchmark in BENCHMARKS)
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{
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for (lib in LIBRARIES)
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{
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2016-05-25 13:34:12 +02:00
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if (lib=="cublas" && is.na(hosts.info[which(hosts.info$Host==host),
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"GPU"]))
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next
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2016-05-24 19:46:13 +02:00
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fp = file.path(RESULTS.DIR, gsub("<HOST>", host, (
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gsub("<LIBRARY>", lib, (
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gsub("<BENCHMARK>", benchmark, BENCHMKAR.PATTERN)))))
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)
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if (file.exists(fp))
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{
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db = readRDS(fp)
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runs = NA
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if (length(attr(db, "runs"))==1) {
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runs = attr(db, "runs")
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} else {
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# gcbd
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db = melt(cbind(db, runs=attr(db, "runs"),
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size=attr(db, "size")),
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id.vars=c("runs", "size"),
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variable.name="name",
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value.name="time")
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runs = db$runs
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}
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size = NA
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if ("size" %in% colnames(db)) # gcbd
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size = db$size
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benchmark.results = rbind(benchmark.results,
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data.frame(Host=host, Benchmark=benchmark,
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Library=lib, Test=db$name,
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Runs=runs, Size=size,
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Time=db$time))
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2016-05-25 13:34:12 +02:00
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} else {
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warning(paste("File", fp, "does not exist"))
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2016-05-24 19:46:13 +02:00
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}
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}
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}
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}
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2016-05-25 16:26:48 +02:00
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saveRDS(benchmark.results, file.path(DATA.DIR, "benchmark.results.rds"))
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2016-05-24 19:46:13 +02:00
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```
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2016-05-25 16:26:48 +02:00
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```{r per-host, echo=FALSE, results='asis'}
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2016-05-26 19:28:38 +02:00
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cat("# Results per host\n\n")
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2016-05-25 16:26:48 +02:00
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for (host in hosts.info$Host)
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{
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host.cpu = hosts.info[which(hosts.info$Host==host), "CPU"]
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host.gpu = hosts.info[which(hosts.info$Host==host), "GPU"]
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cat(paste("##", host.cpu))
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if (!is.na(host.gpu))
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cat(paste(" +", host.gpu))
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2016-05-25 18:46:18 +02:00
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cat("\n\n\n\n")
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2016-05-25 16:26:48 +02:00
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for (benchmark in BENCHMARKS)
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{
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2016-05-26 19:28:38 +02:00
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cat(paste0("### ", paste(toupper(substring(benchmark, 1,1)), substring(benchmark, 2),sep="", collapse=" "), " benchmark\n\n"))
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2016-05-25 18:46:18 +02:00
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2016-05-25 16:26:48 +02:00
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testnames = benchmark.results %>%
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filter(Benchmark == benchmark) %>%
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select(Test) %>%
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unique
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if (benchmark == "urbanek")
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# remove tests with almost the same results
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testnames = testnames %>% filter(row_number() %in% c(4, 5, 7, 8, 9, 10, 15))
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for (i in 1:nrow(testnames))
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{
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test = as.character(testnames[i, "Test"])
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data.to.plot = benchmark.results %>%
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filter(Host == host & Benchmark == benchmark &
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Test == test)
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2016-05-26 14:59:01 +02:00
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if (benchmark != "gcbd")
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data.to.plot = data.to.plot %>%
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mutate(PerfGain=data.to.plot[which(data.to.plot$Library==LIBRARY.REF), "Time"]/Time)
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2016-05-25 18:46:18 +02:00
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2016-05-26 14:59:01 +02:00
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renamedLibs = list(
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2016-05-25 18:46:18 +02:00
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"cuBLAS"="cublas",
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"BLIS"="blis",
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"MKL"="mkl",
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"ATLAS (mt)"="atlas_mt",
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"OpenBLAS"="openblas",
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"GotoBLAS2"="gotoblas2",
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"ATLAS (st)"="atlas_st",
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"Netlib"="netlib")
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2016-05-25 16:26:48 +02:00
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2016-05-26 14:59:01 +02:00
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if (benchmark != "gcbd")
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levels(data.to.plot$Library) = renamedLibs
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else
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levels(data.to.plot$Library) = rev(renamedLibs)
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2016-05-26 02:19:58 +02:00
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data.to.plot = data.to.plot %>%
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mutate(Color=sapply(Library, function(x){
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if(x=="Netlib") "A"
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else if(x=="ATLAS (st)") "B"
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else if(x=="cuBLAS") "D"
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else "C"}))
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2016-05-25 16:26:48 +02:00
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image.path = file.path(IMAGES.DIR,
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paste0("img_ph",
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"_h", which(host == hosts.info$Host),
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"_b", which(benchmark == BENCHMARKS),
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"_t", i,
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".png"))
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2016-05-25 18:46:18 +02:00
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cat(paste0("#### ", gsub(" \\(.*\\)", "", test)), "\n\n")
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2016-05-26 14:59:01 +02:00
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cat(paste0("Time in seconds ", ifelse(benchmark=="gcbd", "regarding matrix size - right panel on log scale", ""), " - ", ifelse(benchmark!="gcbd", data.to.plot$Runs[1], paste(" from ", max(data.to.plot$Runs), " to ", min(data.to.plot$Runs))),
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" runs - lower is better\n\n"))
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2016-05-26 02:19:58 +02:00
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myColors = c("#E6191A", "#F25F1E", "#636363", "#5AAC45")
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names(myColors) = levels(data.to.plot$Color)
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colScale = scale_fill_manual(name = "Color", values = myColors)
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2016-05-25 18:46:18 +02:00
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2016-05-26 14:59:01 +02:00
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if (benchmark != "gcbd")
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{
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2016-05-26 02:19:58 +02:00
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png(image.path, width=600, height=35*nrow(data.to.plot))
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print(ggplot(data.to.plot, aes(x=reorder(Library, -Time), y=Time, fill=Color)) +
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2016-05-25 16:26:48 +02:00
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theme_classic() +
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theme(
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2016-05-25 18:46:18 +02:00
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panel.border = element_blank(),
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axis.title.x=element_blank(),
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axis.title.y=element_blank(),
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axis.text.x = element_text(colour="grey60"),
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axis.ticks.x=element_line(color="grey60"),
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2016-05-26 02:19:58 +02:00
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axis.ticks.y=element_line(color="grey60"),
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legend.position="none"
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2016-05-25 16:26:48 +02:00
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) +
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scale_y_continuous(expand = c(0, 0),
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2016-05-25 18:46:18 +02:00
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limits = c(0, 1.20*max(data.to.plot$Time))) +
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2016-05-26 02:19:58 +02:00
|
|
|
geom_bar(stat="identity", width=.7) +
|
2016-05-25 16:26:48 +02:00
|
|
|
coord_flip() +
|
2016-05-26 02:19:58 +02:00
|
|
|
geom_text(aes(y=Time, x=Library, label=format(Time, digits=2, nsmall=2)), hjust=-0.25, size=3, colour="grey45") +
|
|
|
|
geom_text(aes(y=1.2*max(data.to.plot$Time), x=Library, label=paste0("x", trimws(format(PerfGain, digits=1, nsmall=1)))), hjust=1, size=4) +
|
2016-05-25 18:46:18 +02:00
|
|
|
geom_hline(yintercept = 0, color="grey") +
|
|
|
|
geom_vline(xintercept = 0.4, color="grey") +
|
2016-05-26 02:19:58 +02:00
|
|
|
annotate("text", x=nrow(data.to.plot)+0.55, y=1.2*max(data.to.plot$Time), label="Performance gain", hjust=1) +
|
|
|
|
colScale
|
2016-05-25 16:26:48 +02:00
|
|
|
)
|
|
|
|
dev.off()
|
|
|
|
|
2016-05-25 18:46:18 +02:00
|
|
|
cat(paste0("![](", image.path, ")\n\n\n\n"))
|
2016-05-26 14:59:01 +02:00
|
|
|
|
|
|
|
} else {
|
|
|
|
rbColors = c("#F40000","#FF8000","#0094FF","#E900FF","#B35807","#7F00FF","#FFBC70","#00DD0E")
|
|
|
|
|
|
|
|
png(image.path, width=400, height=350, type="cairo")
|
|
|
|
print(ggplot(data.to.plot,
|
|
|
|
aes(x=Size, y=Time, group=Library, color=Library,
|
|
|
|
shape=Library, fill=Library)) +
|
|
|
|
theme_classic() +
|
|
|
|
theme(
|
|
|
|
panel.border = element_blank(),
|
|
|
|
axis.title.x=element_blank(),
|
|
|
|
axis.title.y=element_blank(),
|
|
|
|
axis.text.x = element_text(colour="grey60"),
|
|
|
|
axis.text.y = element_text(colour="grey60"),
|
|
|
|
axis.ticks.x=element_line(color="grey60"),
|
|
|
|
axis.ticks.y=element_line(color="grey60"),
|
|
|
|
legend.margin=unit(c(-13,8), "mm"),
|
|
|
|
legend.title=element_blank()
|
|
|
|
) +
|
|
|
|
geom_line(size=1) +
|
|
|
|
geom_point(size=2, color="grey30") +
|
|
|
|
scale_x_continuous(expand = c(0, 0),
|
|
|
|
limits = c(0, 5000)) +
|
|
|
|
scale_y_continuous(expand = c(0, 0)) +
|
|
|
|
coord_cartesian(ylim=c(0, max(20, max(data.to.plot$Time)/3))) +
|
|
|
|
geom_hline(yintercept = 0, color="grey") +
|
|
|
|
geom_vline(xintercept = 0.4, color="grey") +
|
|
|
|
scale_shape_manual(values=c(21,24,22,25,23,21,22,23)) +
|
|
|
|
scale_color_manual(values=rbColors) +
|
|
|
|
scale_fill_manual(values=rbColors)
|
|
|
|
|
|
|
|
)
|
|
|
|
dev.off()
|
|
|
|
|
|
|
|
cat(paste0("![](", image.path, ")"))
|
|
|
|
|
|
|
|
png(gsub(".png", "b.png", image.path), width=350, height=350, type="cairo")
|
|
|
|
print(ggplot(data.to.plot,
|
|
|
|
aes(x=Size, y=Time, group=Library, color=Library,
|
|
|
|
shape=Library, fill=Library)) +
|
|
|
|
theme_classic() +
|
|
|
|
theme(
|
|
|
|
panel.border = element_blank(),
|
|
|
|
axis.title.x=element_blank(),
|
|
|
|
axis.title.y=element_blank(),
|
|
|
|
axis.text.x = element_text(colour="grey60"),
|
|
|
|
axis.text.y = element_text(colour="grey60"),
|
|
|
|
axis.ticks.x=element_line(color="grey60"),
|
|
|
|
axis.ticks.y=element_line(color="grey60"),
|
|
|
|
legend.position="none"
|
|
|
|
) +
|
|
|
|
geom_line(size=1) +
|
|
|
|
geom_point(size=2, color="grey30") +
|
|
|
|
scale_x_log10(expand=c(0,0),
|
|
|
|
breaks=c(100, 200, 400, 800, 1600, 3200, 5000),
|
|
|
|
limits=c(100, 5500)) +
|
|
|
|
scale_y_log10() +
|
|
|
|
scale_shape_manual(values=c(21,24,22,25,23,21,22,23)) +
|
|
|
|
geom_hline(yintercept = 0, color="grey") +
|
|
|
|
geom_vline(xintercept = min(data.to.plot$Size), color="grey") +
|
|
|
|
scale_color_manual(values=rbColors) +
|
|
|
|
scale_fill_manual(values=rbColors)
|
|
|
|
|
|
|
|
)
|
|
|
|
dev.off()
|
|
|
|
|
|
|
|
cat(paste0("![](", gsub(".png", "b.png", image.path), ")\n\n\n\n"))
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
2016-05-25 16:26:48 +02:00
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
```
|
2016-05-26 19:28:38 +02:00
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
```{r per-library, echo=FALSE, results='asis'}
|
|
|
|
|
|
|
|
cat("# Results per library\n\n")
|
|
|
|
|
|
|
|
renamedLibs = list(
|
|
|
|
"cublas"="cuBLAS",
|
|
|
|
"blis"="BLIS",
|
|
|
|
"mkl"="MKL",
|
|
|
|
"atlas_mt"="ATLAS (mt)",
|
|
|
|
"openblas"="OpenBLAS",
|
|
|
|
"gotoblas2"="GotoBLAS2",
|
|
|
|
"atlas_st"="ATLAS (st)",
|
|
|
|
"netlib"="Netlib")
|
|
|
|
|
|
|
|
for (lib in LIBRARIES)
|
|
|
|
{
|
|
|
|
cat(paste("##", renamedLibs[[lib]]))
|
|
|
|
|
|
|
|
cat("\n\n\n\n")
|
|
|
|
|
|
|
|
for (benchmark in BENCHMARKS)
|
|
|
|
{
|
|
|
|
cat(paste0("### ", paste(toupper(substring(benchmark, 1,1)), substring(benchmark, 2),sep="", collapse=" "), " benchmark\n\n"))
|
|
|
|
|
|
|
|
testnames = benchmark.results %>%
|
|
|
|
filter(Benchmark == benchmark) %>%
|
|
|
|
select(Test) %>%
|
|
|
|
unique
|
|
|
|
|
|
|
|
if (benchmark == "urbanek")
|
|
|
|
# remove tests with almost the same results
|
|
|
|
testnames = testnames %>% filter(row_number() %in% c(4, 5, 7, 8, 9, 10, 15))
|
|
|
|
|
|
|
|
|
|
|
|
for (i in 1:nrow(testnames))
|
|
|
|
{
|
|
|
|
test = as.character(testnames[i, "Test"])
|
|
|
|
|
|
|
|
data.to.plot = benchmark.results %>%
|
|
|
|
filter(Library == lib & Benchmark == benchmark &
|
|
|
|
Test == test)
|
|
|
|
|
|
|
|
if (benchmark != "gcbd")
|
|
|
|
{
|
|
|
|
if (lib!="cublas")
|
|
|
|
data.to.plot = data.to.plot %>%
|
|
|
|
mutate(PerfGain=data.to.plot[which(hosts.info$CPU==HOST.REF), "Time"]/Time)
|
|
|
|
else
|
|
|
|
data.to.plot = data.to.plot %>%
|
|
|
|
mutate(PerfGain=data.to.plot[which(hosts.info$GPU==HOST.REF.GPU), "Time"]/Time)
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
data.to.plot = data.to.plot %>% rowwise() %>%
|
|
|
|
mutate(CPUGPU=hosts.info[which(hosts.info$Host==Host), ifelse(lib!="cublas", "CPU", "GPU")])
|
|
|
|
|
|
|
|
image.path = file.path(IMAGES.DIR,
|
|
|
|
paste0("img_pl",
|
|
|
|
"_l", which(lib == LIBRARIES),
|
|
|
|
"_b", which(benchmark == BENCHMARKS),
|
|
|
|
"_t", i,
|
|
|
|
".png"))
|
|
|
|
|
|
|
|
cat(paste0("#### ", gsub(" \\(.*\\)", "", test)), "\n\n")
|
|
|
|
cat(paste0("Time in seconds ", ifelse(benchmark=="gcbd", "regarding matrix size - right panel on log scale", ""), " - ", ifelse(benchmark!="gcbd", data.to.plot$Runs[1], paste(" from ", max(data.to.plot$Runs), " to ", min(data.to.plot$Runs))),
|
|
|
|
" runs - lower is better\n\n"))
|
|
|
|
|
|
|
|
|
2016-05-31 00:00:52 +02:00
|
|
|
myColors = c("#5AAC45", "#636363", "#636363", "#E6191A", "#636363", "#636363")
|
2016-05-29 17:45:39 +02:00
|
|
|
if (lib=="cublas")
|
2016-05-31 00:00:52 +02:00
|
|
|
myColors = c("#E6191A", "#5AAC45", "#636363")#, "#636363", "#5AAC45", "#636363")
|
2016-05-29 17:45:39 +02:00
|
|
|
|
2016-05-26 19:28:38 +02:00
|
|
|
colScale = scale_fill_manual(name = "Color", values = myColors)
|
|
|
|
|
2016-05-31 00:00:52 +02:00
|
|
|
data.to.plot = unique(select(data.to.plot, -Host))
|
|
|
|
|
2016-05-26 19:28:38 +02:00
|
|
|
if (benchmark != "gcbd")
|
|
|
|
{
|
2016-05-31 00:00:52 +02:00
|
|
|
png(image.path, width=600, height=50*length(unique(data.to.plot$CPUGPU))+ifelse(nrow(data.to.plot)>1, 0, 20))
|
2016-05-26 19:28:38 +02:00
|
|
|
print(ggplot(data.to.plot, aes(x=reorder(CPUGPU, -Time), y=Time,
|
|
|
|
fill=CPUGPU)) +
|
|
|
|
theme_classic() +
|
|
|
|
theme(
|
|
|
|
panel.border = element_blank(),
|
|
|
|
axis.title.x=element_blank(),
|
|
|
|
axis.title.y=element_blank(),
|
|
|
|
axis.text.x = element_text(colour="grey60"),
|
|
|
|
axis.ticks.x=element_line(color="grey60"),
|
|
|
|
axis.ticks.y=element_line(color="grey60"),
|
|
|
|
legend.position="none"
|
|
|
|
) +
|
|
|
|
scale_y_continuous(expand = c(0, 0),
|
|
|
|
limits = c(0, 1.20*max(data.to.plot$Time))) +
|
|
|
|
geom_bar(stat="identity", width=.7) +
|
|
|
|
coord_flip() +
|
|
|
|
geom_text(aes(y=Time, x=CPUGPU, label=format(Time, digits=2, nsmall=2)), hjust=-0.25, size=3, colour="grey45") +
|
|
|
|
geom_text(aes(y=1.2*max(data.to.plot$Time), x=CPUGPU, label=paste0("x", trimws(format(PerfGain, digits=1, nsmall=1)))), hjust=1, size=4) +
|
|
|
|
geom_hline(yintercept = 0, color="grey") +
|
|
|
|
geom_vline(xintercept = 0.4, color="grey") +
|
2016-05-31 00:00:52 +02:00
|
|
|
annotate("text", x=length(unique(data.to.plot$CPUGPU))+ifelse(nrow(data.to.plot)>1, 0.55, 0.45), y=1.2*max(data.to.plot$Time), label="Performance gain", hjust=1) +
|
2016-05-26 19:28:38 +02:00
|
|
|
colScale
|
|
|
|
)
|
|
|
|
dev.off()
|
|
|
|
|
|
|
|
cat(paste0("![](", image.path, ")\n\n\n\n"))
|
|
|
|
|
|
|
|
} else {
|
|
|
|
|
2016-05-29 17:45:39 +02:00
|
|
|
rbColors = c("#F40000","#FF8000","#0094FF","#7F00FF","#E900FF","#00DD0E")
|
2016-05-26 19:28:38 +02:00
|
|
|
|
|
|
|
png(image.path, width=400, height=350, type="cairo")
|
|
|
|
print(ggplot(data.to.plot,
|
|
|
|
aes(x=Size, y=Time, group=CPUGPU, color=CPUGPU,
|
|
|
|
shape=CPUGPU, fill=CPUGPU)) +
|
|
|
|
theme_classic() +
|
|
|
|
theme(
|
|
|
|
panel.border = element_blank(),
|
|
|
|
axis.title.x=element_blank(),
|
|
|
|
axis.title.y=element_blank(),
|
|
|
|
axis.text.x = element_text(colour="grey60"),
|
|
|
|
axis.text.y = element_text(colour="grey60"),
|
|
|
|
axis.ticks.x=element_line(color="grey60"),
|
|
|
|
axis.ticks.y=element_line(color="grey60"),
|
|
|
|
legend.margin=unit(c(-13,8), "mm"),
|
|
|
|
legend.title=element_blank()
|
|
|
|
) +
|
|
|
|
geom_line(size=1) +
|
|
|
|
geom_point(size=2, color="grey30") +
|
|
|
|
scale_x_continuous(expand = c(0, 0),
|
|
|
|
limits = c(0, 5000)) +
|
|
|
|
scale_y_continuous(expand = c(0, 0)) +
|
|
|
|
geom_hline(yintercept = 0, color="grey") +
|
|
|
|
geom_vline(xintercept = 0.4, color="grey") +
|
2016-05-31 00:00:52 +02:00
|
|
|
scale_shape_manual(values=c(25,24,22,21,23,25)) +
|
2016-05-26 19:28:38 +02:00
|
|
|
scale_color_manual(values=rbColors) +
|
|
|
|
scale_fill_manual(values=rbColors)
|
|
|
|
|
|
|
|
)
|
|
|
|
dev.off()
|
|
|
|
|
|
|
|
cat(paste0("![](", image.path, ")"))
|
|
|
|
|
|
|
|
png(gsub(".png", "b.png", image.path), width=350, height=350, type="cairo")
|
|
|
|
print(ggplot(data.to.plot,
|
|
|
|
aes(x=Size, y=Time, group=CPUGPU, color=CPUGPU,
|
|
|
|
shape=CPUGPU, fill=CPUGPU)) +
|
|
|
|
theme_classic() +
|
|
|
|
theme(
|
|
|
|
panel.border = element_blank(),
|
|
|
|
axis.title.x=element_blank(),
|
|
|
|
axis.title.y=element_blank(),
|
|
|
|
axis.text.x = element_text(colour="grey60"),
|
|
|
|
axis.text.y = element_text(colour="grey60"),
|
|
|
|
axis.ticks.x=element_line(color="grey60"),
|
|
|
|
axis.ticks.y=element_line(color="grey60"),
|
|
|
|
legend.position="none"
|
|
|
|
) +
|
|
|
|
geom_line(size=1) +
|
|
|
|
geom_point(size=2, color="grey30") +
|
|
|
|
scale_x_log10(expand=c(0,0),
|
|
|
|
breaks=c(100, 200, 400, 800, 1600, 3200, 5000),
|
|
|
|
limits=c(100, 5500)) +
|
|
|
|
scale_y_log10() +
|
2016-05-31 00:00:52 +02:00
|
|
|
scale_shape_manual(values=c(25,24,22,21,23,25)) +
|
2016-05-26 19:28:38 +02:00
|
|
|
geom_hline(yintercept = 0, color="grey") +
|
|
|
|
geom_vline(xintercept = min(data.to.plot$Size), color="grey") +
|
|
|
|
scale_color_manual(values=rbColors) +
|
|
|
|
scale_fill_manual(values=rbColors)
|
|
|
|
|
|
|
|
)
|
|
|
|
dev.off()
|
|
|
|
|
|
|
|
cat(paste0("![](", gsub(".png", "b.png", image.path), ")\n\n\n\n"))
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
|
|
|
|
|
|
|
|
}
|
|
|
|
}
|
|
|
|
|
|
|
|
```
|
|
|
|
|