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added linux headers from debian snapshot;

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removed clBLAS
This commit is contained in:
Andrzej Wójtowicz 2016-05-14 18:19:34 +02:00
parent bdca7f503d
commit 18608545ec
1 changed files with 4 additions and 48 deletions
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52
install-env.sh
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@ -4,14 +4,15 @@ WGET_OPTIONS="--no-check-certificate"
MRO_VERSION="3.2.4" MRO_VERSION="3.2.4"
CHECKPOINT_DATE="2016-04-01" CHECKPOINT_DATE="2016-04-01"
R_SAMPLE_BENCHMARK="Rscript sample-benchmark.R" R_SAMPLE_BENCHMARK="Rscript sample-benchmark.R"
DIR_BLAP="/opt/blap-lib" DIR_BLAP="/opt/blas-libs"
function mro_install { function mro_install {
echo "Started installing Microsoft R Open and dependencies" echo "Started installing Microsoft R Open and dependencies"
# update debian repos & upgrade packages # update debian repos & upgrade packages
apt-get update echo "deb http://snapshot.debian.org/archive/debian/20160411T102554Z/ jessie-backports main" >> /etc/apt/sources.list
apt-get -o Acquire::Check-Valid-Until=false update
DEBIAN_FRONTEND=noninteractive apt-get -y -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew" upgrade DEBIAN_FRONTEND=noninteractive apt-get -y -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew" upgrade
# install new packages for R # install new packages for R
@ -434,13 +435,11 @@ function cublas_install {
echo "Started installing cuBLAS" echo "Started installing cuBLAS"
# TODO: cuSOLVE (dense, LAPACK)?
mkdir /opt/blap-lib/cublas mkdir /opt/blap-lib/cublas
modprobe -r nouveau modprobe -r nouveau
DEBIAN_FRONTEND=noninteractive apt-get install linux-headers-$(uname -r|sed 's,[^-]*-[^-]*-,,') nvidia-driver nvidia-modprobe libcuda1 libnvblas6.0 -y -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew" DEBIAN_FRONTEND=noninteractive apt-get install linux-headers-$(uname -r) nvidia-driver nvidia-modprobe libcuda1 libnvblas6.0 -y -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew"
nvidia-modprobe nvidia-modprobe
@ -485,49 +484,6 @@ function cublas_check {
echo "Finished checking cuBLAS" echo "Finished checking cuBLAS"
} }
##############################################################
# clBLAS #
# - https://github.com/clMathLibraries/clBLAS #
# - BLAS #
# - OpenCL #
##############################################################
#DIR_CLBLAS=${DIR_BLAP}/clblas
#
#function clblas_install {
#
# echo "Started installing clBLAS"
#
# # TODO: req. OpenCL 1.2
# apt-get install libboost-dev liblapack-dev libboost-program-options-dev nvidia-opencl-dev
# apt-get clean
#
# wget ${WGET_OPTIONS} https://github.com/clMathLibraries/clBLAS/archive/v2.10.tar.gz -O clBLAS-2.10.tar.gz
# tar -xvzf clBLAS-2.10.tar.gz
# rm clBLAS-2.10.tar.gz
#
# cd clBLAS-2.10/src
#
# cmake .
# make -j `nproc`
#
# cp library/libclBLAS.so ${DIR_CLBLAS}
#
# cd ../..
# rm -r clBLAS-2.10
#
# echo "Finished installing clBLAS"
#}
#
#function clblas_check {
#
# echo "Started checking clBLAS"
#
# LD_PRELOAD="${DIR_CLBLAS}/libclBLAS.so /lib/x86_64-linux-gnu/libpthread.so.0" ${R_SAMPLE_BENCHMARK}
#
# echo "Finished checking clBLAS"
#
#}
############################################################## ##############################################################
############################################################## ##############################################################