mirror of
https://github.com/andre-wojtowicz/blas-benchmarks
synced 2024-11-22 07:50:27 +01:00
added cuBLAS;
minor changes
This commit is contained in:
parent
6e637d14bc
commit
3320ca2a94
1
.gitignore
vendored
1
.gitignore
vendored
@ -16,3 +16,4 @@ vignettes/*.pdf
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# OAuth2 token, see https://github.com/hadley/httr/releases/tag/v0.3
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.httr-oauth
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cpuinfo
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139
install-env.sh
139
install-env.sh
@ -8,7 +8,7 @@ DIR_BLAP="/opt/blap-lib"
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function mro_install {
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echo "Started installing Microsoft R Open and dependencies."
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echo "Started installing Microsoft R Open and dependencies"
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# update debian repos & upgrade packages
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apt-get update
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@ -44,7 +44,7 @@ function mro_install {
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# clean archives
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apt-get clean
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echo "Finished installing Microsoft R Open and dependencies."
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echo "Finished installing Microsoft R Open and dependencies"
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}
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##############################################################
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@ -64,7 +64,7 @@ DIR_NETLIB="${DIR_BLAP}/netlib"
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function netlib_install {
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echo "Started installing netlib."
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echo "Started installing netlib"
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mkdir ${DIR_NETLIB}
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@ -88,7 +88,7 @@ function netlib_check {
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LD_PRELOAD="${DIR_NETLIB}/libblas.so.3.0 ${DIR_NETLIB}/liblapack.so.3.0" ${R_SAMPLE_BENCHMARK}
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echo "Finished checking netlib."
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echo "Finished checking netlib"
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}
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##############################################################
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@ -102,7 +102,7 @@ DIR_ATLAS_ST="${DIR_BLAP}/atlas-st"
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function atlas_st_install {
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echo "Started installing ATLAS (single-threaded)."
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echo "Started installing ATLAS (single-threaded)"
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mkdir ${DIR_ATLAS_ST}
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@ -118,16 +118,16 @@ function atlas_st_install {
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echo "Installed files:"
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find ${DIR_ATLAS_ST} -type f
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echo "Finished installing ATLAS (single-threaded)."
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echo "Finished installing ATLAS (single-threaded)"
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}
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function atlas_st_check {
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echo "Started checking ATLAS (single-threaded)."
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echo "Started checking ATLAS (single-threaded)"
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LD_PRELOAD="${DIR_ATLAS_ST}/libatlas.so.3 ${DIR_ATLAS_ST}/libblas.so.3 ${DIR_ATLAS_ST}/liblapack.so.3" ${R_SAMPLE_BENCHMARK}
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echo "Finished checking ATLAS (single-threaded)."
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echo "Finished checking ATLAS (single-threaded)"
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}
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##############################################################
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@ -141,7 +141,7 @@ DIR_OPENBLAS="${DIR_BLAP}/openblas"
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function openblas_install {
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echo "Started installing OpenBLAS."
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echo "Started installing OpenBLAS"
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mkdir ${DIR_OPENBLAS}
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@ -157,16 +157,16 @@ function openblas_install {
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echo "Installed files:"
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find ${DIR_OPENBLAS} -type f
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echo "Finished installing OpenBLAS."
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echo "Finished installing OpenBLAS"
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}
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function openblas_check {
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echo "Started checking OpenBLAS."
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echo "Started checking OpenBLAS"
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LD_PRELOAD="${DIR_OPENBLAS}/libopenblas.so.0 ${DIR_OPENBLAS}/libblas.so.3 ${DIR_OPENBLAS}/liblapack.so.3" ${R_SAMPLE_BENCHMARK}
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echo "Finished checking OpenBLAS."
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echo "Finished checking OpenBLAS"
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}
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##############################################################
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@ -180,7 +180,7 @@ DIR_ATLAS_MT="${DIR_BLAP}/atlas-mt"
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function atlas_mt_install {
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echo "Started installing ATLAS (multi-threaded)."
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echo "Started installing ATLAS (multi-threaded)"
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mkdir ${DIR_ATLAS_MT}
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@ -205,16 +205,16 @@ function atlas_mt_install {
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echo "Installed files:"
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find ${DIR_ATLAS_MT} -type f
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echo "Finished installing ATLAS (multi-threaded)."
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echo "Finished installing ATLAS (multi-threaded)"
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}
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function atlas_mt_check {
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echo "Started checking ATLAS (multi-threaded)."
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echo "Started checking ATLAS (multi-threaded)"
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LD_PRELOAD="${DIR_ATLAS_MT}/libtatlas.so" ${R_SAMPLE_BENCHMARK}
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echo "Finished checking ATLAS (multi-threaded)."
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echo "Finished checking ATLAS (multi-threaded)"
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}
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##############################################################
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@ -228,7 +228,7 @@ DIR_GOTOBLAS2="${DIR_BLAP}/gotoblas2"
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function gotoblas2_install {
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echo "Started installing GotoBLAS2."
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echo "Started installing GotoBLAS2"
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mkdir ${DIR_GOTOBLAS2}
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@ -250,12 +250,12 @@ function gotoblas2_install {
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echo "Installed files:"
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find ${DIR_GOTOBLAS2} -type f
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echo "Finished installing GotoBLAS2."
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echo "Finished installing GotoBLAS2"
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}
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function gotoblas2_check {
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echo "Started checking GotoBLAS2."
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echo "Started checking GotoBLAS2"
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echo "${DIR_GOTOBLAS2}" > /etc/ld.so.conf.d/gotoblas2.conf
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ldconfig
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@ -267,7 +267,7 @@ function gotoblas2_check {
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ldconfig
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rm sample-benchmark-gotoblas2.R
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echo "Finished checking GotoBLAS2."
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echo "Finished checking GotoBLAS2"
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}
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##############################################################
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@ -281,7 +281,7 @@ DIR_MKL="${DIR_BLAP}/mkl"
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function mkl_install {
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echo "Started installing MKL."
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echo "Started installing MKL"
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mkdir ${DIR_MKL}
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@ -296,16 +296,16 @@ function mkl_install {
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echo "Installed files:"
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find ${DIR_MKL} -type f
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echo "Finished installing MKL."
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echo "Finished installing MKL"
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}
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function mkl_check {
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echo "Started checking MKL."
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echo "Started checking MKL"
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LD_PRELOAD="${DIR_MKL}/libRblas.so ${DIR_MKL}/libRlapack.so ${DIR_MKL}/libmkl_vml_mc3.so ${DIR_MKL}/libmkl_vml_def.so ${DIR_MKL}/libmkl_gnu_thread.so ${DIR_MKL}/libmkl_core.so ${DIR_MKL}/libmkl_gf_lp64.so ${DIR_MKL}/libiomp5.so ${DIR_MKL}/libmkl_gf_ilp64.so" MKL_INTERFACE_LAYER="GNU,LP64" MKL_THREADING_LAYER="GNU" ${R_SAMPLE_BENCHMARK}
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echo "Finished checking MKL."
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echo "Finished checking MKL"
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}
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##############################################################
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@ -319,7 +319,7 @@ DIR_BLIS="${DIR_BLAP}/blis"
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function blis_install {
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echo "Started installing BLIS."
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echo "Started installing BLIS"
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mkdir ${DIR_BLIS}
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@ -338,17 +338,17 @@ function blis_install {
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echo "Installed files:"
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find ${DIR_BLIS} -type f
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echo "Finished installing BLIS."
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echo "Finished installing BLIS"
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}
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function blis_check {
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echo "Started checking BLIS."
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echo "Started checking BLIS"
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# TODO: auto set variables according to https://github.com/flame/blis/wiki/Multithreading
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LD_PRELOAD="${DIR_BLIS}/libblis.so" BLIS_JC_NT=2 BLIS_IC_NT=1 BLIS_JR_NT=1 BLIS_IR_NT=1 ${R_SAMPLE_BENCHMARK}
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echo "Finished checking BLIS."
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echo "Finished checking BLIS"
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}
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##############################################################
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@ -357,29 +357,6 @@ function blis_check {
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##############################################################
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##############################################################
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##############################################################
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# clBLAS #
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# - https://github.com/clMathLibraries/clBLAS #
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# - BLAS #
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# - OpenCL #
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##############################################################
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function clblas_install {
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echo "Started installing clBLAS."
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wget ${WGET_OPTIONS} https://github.com/clMathLibraries/clBLAS/archive/v2.10.tar.gz -O clBLAS-2.10.tar.gz
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tar -xvzf clBLAS-2.10.tar.gz
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rm clBLAS-2.10.tar.gz
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#cd clBLAS-2.10
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#
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#cd ..
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echo "TODO!"
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echo "Finished installing clBLAS."
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}
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##############################################################
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# cuBLAS (NVBLAS) #
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# - https://developer.nvidia.com/cublas #
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@ -389,26 +366,19 @@ function clblas_install {
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function cublas_install {
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echo "Started installing cuBLAS."
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echo "Started installing cuBLAS"
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# TODO: cuSOLVE (dense, LAPACK)?
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mkdir /opt/blap-lib/cublas
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# Ubuntu dependencies
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wget ${WGET_OPTIONS} http://de.archive.ubuntu.com/ubuntu/pool/main/x/x-kit/python3-xkit_0.5.0ubuntu2_all.deb
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wget ${WGET_OPTIONS} http://de.archive.ubuntu.com/ubuntu/pool/main/s/screen-resolution-extra/screen-resolution-extra_0.17.1_all.deb
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gdebi -n python3-xkit_0.5.0ubuntu2_all.deb
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gdebi -n screen-resolution-extra_0.17.1_all.deb
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modprobe -r nouveau
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wget ${WGET_OPTIONS} http://developer.download.nvidia.com/compute/cuda/repos/ubuntu1504/x86_64/cuda-repo-ubuntu1504_7.5-18_amd64.deb
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gdebi -n cuda-repo-ubuntu1504_7.5-18_amd64.deb
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rm cuda-repo-ubuntu1504_7.5-18_amd64.deb
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apt-get install nvidia-drivers nvidia-modprobe libnvblas6.0 -y
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apt-get update
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apt-get install cuda
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nvidia-modprobe
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echo "NVBLAS_LOGFILE nvblas.log
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echo "#NVBLAS_LOGFILE nvblas.log
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NVBLAS_CPU_BLAS_LIB /opt/blap-lib/netlib/libblas.so.3.0
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NVBLAS_GPU_LIST ALL0
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NVBLAS_TILE_DIM 2048
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@ -416,10 +386,39 @@ function cublas_install {
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apt-get clean
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# run R:
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# NVBLAS_CONFIG_FILE=/opt/blap-lib/cublas/nvblas.conf LD_PRELOAD="/usr/local/cuda-7.5/targets/x86_64-linux/lib/libnvblas.so.7.5 /usr/local/cuda-7.5/targets/x86_64-linux/lib/libcublas.so.7.5" R
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echo "Finished installing cuBLAS"
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}
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echo "Finished installing cuBLAS."
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function cublas_test {
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echo "Started checking cuBLAS"
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NVBLAS_CONFIG_FILE=/opt/blap-lib/cublas/nvblas.conf LD_PRELOAD="/usr/lib/x86_64-linux-gnu/libnvblas.so.6.0 /usr/lib/x86_64-linux-gnu/libcublas.so.6.0" R -q
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echo "Finished checking cuBLAS"
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}
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##############################################################
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# clBLAS #
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# - https://github.com/clMathLibraries/clBLAS #
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# - BLAS #
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# - OpenCL #
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##############################################################
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function clblas_install {
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echo "Started installing clBLAS"
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wget ${WGET_OPTIONS} https://github.com/clMathLibraries/clBLAS/archive/v2.10.tar.gz -O clBLAS-2.10.tar.gz
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tar -xvzf clBLAS-2.10.tar.gz
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rm clBLAS-2.10.tar.gz
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#cd clBLAS-2.10
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#
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#cd ..
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echo "TODO!"
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echo "Finished installing clBLAS"
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}
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##############################################################
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@ -431,11 +430,11 @@ function cublas_install {
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function magma_install {
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echo "Started installing MAGMA."
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echo "Started installing MAGMA"
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echo "TODO!"
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echo "Finished installing MAGMA."
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echo "Finished installing MAGMA"
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}
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##############################################################
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@ -447,11 +446,11 @@ function magma_install {
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function cula_install {
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echo "Started installing CULA."
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echo "Started installing CULA"
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echo "TODO!"
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echo "Finished installing CULA."
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echo "Finished installing CULA"
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}
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