mirror of
https://github.com/andre-wojtowicz/blas-benchmarks
synced 2024-12-22 11:25:29 +01:00
added urbanek and revolution benchmarks to check;
turned off cpu throttling check in atlas multi-threaded; updated blis; urbanek benchmark: added loading method lib for Rscript
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@ -1,5 +1,7 @@
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# source: http://r.research.att.com/benchmarks/R-benchmark-25.R
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library(methods) # for Rscript
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# R Benchmark 2.5 (06/2008) [Simon Urbanek]
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# version 2.5: scaled to get roughly 1s per test, R 2.7.0 @ 2.6GHz Mac Pro
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# R Benchmark 2.4 (06/2008) [Simon Urbanek]
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@ -3,7 +3,7 @@
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WGET_OPTIONS="--no-check-certificate"
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MRO_VERSION="3.2.4"
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CHECKPOINT_DATE="2016-04-01"
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R_SAMPLE_BENCHMARK="Rscript sample-benchmark.R"
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R_BENCHMARK_SCRIPT="sample-benchmark.R"
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DIR_BLAS="/opt/blas-libs"
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if [ ! -f ./cpuinfo ]; then
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@ -48,6 +48,8 @@ function mro_install {
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mkdir ~/.checkpoint
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Rscript -e "library(checkpoint); checkpoint('${CHECKPOINT_DATE}')"
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sed -i "1i\library(checkpoint); checkpoint('${CHECKPOINT_DATE}', scanForPackages=FALSE, verbose=FALSE)" sample-benchmark.R
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sed -i "1i\library(checkpoint); checkpoint('${CHECKPOINT_DATE}', scanForPackages=FALSE, verbose=FALSE)" revolution-benchmark.R
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sed -i "1i\library(checkpoint); checkpoint('${CHECKPOINT_DATE}', scanForPackages=FALSE, verbose=FALSE)" R-benchmark-25.R
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# make directory for BLAS and LAPACK libraries
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mkdir -p ${DIR_BLAS}
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@ -107,7 +109,7 @@ function netlib_check {
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echo "Started checking netlib."
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LD_PRELOAD="${DIR_NETLIB}/libblas.so.3.0 ${DIR_NETLIB}/liblapack.so.3.0" ${R_SAMPLE_BENCHMARK}
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LD_PRELOAD="${DIR_NETLIB}/libblas.so.3.0 ${DIR_NETLIB}/liblapack.so.3.0" Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking netlib"
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}
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@ -147,7 +149,7 @@ function atlas_st_check {
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echo "Started checking ATLAS (single-threaded)"
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LD_PRELOAD="${DIR_ATLAS_ST}/libatlas.so.3 ${DIR_ATLAS_ST}/libblas.so.3 ${DIR_ATLAS_ST}/liblapack.so.3" ${R_SAMPLE_BENCHMARK}
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LD_PRELOAD="${DIR_ATLAS_ST}/libatlas.so.3 ${DIR_ATLAS_ST}/libblas.so.3 ${DIR_ATLAS_ST}/liblapack.so.3" Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking ATLAS (single-threaded)"
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}
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@ -196,7 +198,7 @@ function openblas_check {
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echo "Started checking OpenBLAS"
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LD_PRELOAD="${DIR_OPENBLAS}/libopenblas.so.0 ${DIR_OPENBLAS}/libblas.so.3 ${DIR_OPENBLAS}/liblapack.so.3" ${R_SAMPLE_BENCHMARK}
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LD_PRELOAD="${DIR_OPENBLAS}/libopenblas.so.0 ${DIR_OPENBLAS}/libblas.so.3 ${DIR_OPENBLAS}/liblapack.so.3" Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking OpenBLAS"
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}
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@ -235,6 +237,8 @@ function atlas_mt_install {
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wget ${WGET_OPTIONS} http://www.netlib.org/lapack/lapack-3.6.0.tgz
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sed -i "1423i\thrchk=0;" ../CONFIG/src/config.c
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../configure --shared --with-netlib-lapack-tarfile=`pwd`/lapack-3.6.0.tgz
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make
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@ -253,7 +257,7 @@ function atlas_mt_check {
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echo "Started checking ATLAS (multi-threaded)"
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LD_PRELOAD="${DIR_ATLAS_MT}/libtatlas.so" ${R_SAMPLE_BENCHMARK}
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LD_PRELOAD="${DIR_ATLAS_MT}/libtatlas.so" Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking ATLAS (multi-threaded)"
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}
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@ -309,13 +313,13 @@ function gotoblas2_check {
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echo "${DIR_GOTOBLAS2}" > /etc/ld.so.conf.d/gotoblas2.conf
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ldconfig
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sed "2i\library(RhpcBLASctl); blas_set_num_threads(${NPROC})" sample-benchmark.R > sample-benchmark-gotoblas2.R
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sed "2i\library(RhpcBLASctl); blas_set_num_threads(${NPROC})" ${R_BENCHMARK_SCRIPT} > benchmark-gotoblas2.R
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LD_PRELOAD="${DIR_GOTOBLAS2}/libgoto2blas.so ${DIR_GOTOBLAS2}/libgoto2lapack.so" GOTO_NUM_THREADS=${NPROC} Rscript sample-benchmark-gotoblas2.R
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LD_PRELOAD="${DIR_GOTOBLAS2}/libgoto2blas.so ${DIR_GOTOBLAS2}/libgoto2lapack.so" GOTO_NUM_THREADS=${NPROC} Rscript benchmark-gotoblas2.R
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rm /etc/ld.so.conf.d/gotoblas2.conf
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ldconfig
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rm sample-benchmark-gotoblas2.R
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rm benchmark-gotoblas2.R
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echo "Finished checking GotoBLAS2"
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}
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@ -362,7 +366,7 @@ function mkl_check {
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echo "Started checking MKL"
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LD_PRELOAD="${DIR_MKL}/libRblas.so ${DIR_MKL}/libRlapack.so ${DIR_MKL}/libmkl_vml_mc3.so ${DIR_MKL}/libmkl_vml_def.so ${DIR_MKL}/libmkl_gnu_thread.so ${DIR_MKL}/libmkl_core.so ${DIR_MKL}/libmkl_gf_lp64.so ${DIR_MKL}/libiomp5.so ${DIR_MKL}/libmkl_gf_ilp64.so" MKL_INTERFACE_LAYER="GNU,LP64" MKL_THREADING_LAYER="GNU" ${R_SAMPLE_BENCHMARK}
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LD_PRELOAD="${DIR_MKL}/libRblas.so ${DIR_MKL}/libRlapack.so ${DIR_MKL}/libmkl_vml_mc3.so ${DIR_MKL}/libmkl_vml_def.so ${DIR_MKL}/libmkl_gnu_thread.so ${DIR_MKL}/libmkl_core.so ${DIR_MKL}/libmkl_gf_lp64.so ${DIR_MKL}/libiomp5.so ${DIR_MKL}/libmkl_gf_ilp64.so" MKL_INTERFACE_LAYER="GNU,LP64" MKL_THREADING_LAYER="GNU" Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking MKL"
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}
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@ -393,7 +397,7 @@ function blis_install {
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git clone https://github.com/flame/blis.git
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cd blis
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git checkout 0b01d355ae861754ae2da6c9a545474af010f02e
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git checkout 32db0adc218ea4ae370164dbe8d23b41cd3526d3 # 17.05.2016
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./configure -t pthreads --enable-shared auto
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make -j ${NPROC}
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@ -478,7 +482,7 @@ function blis_check {
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((PARALLEL_STEPS--))
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done
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LD_PRELOAD="${DIR_BLIS}/libblis.so" BLIS_JC_NT=${COUNT_JC} BLIS_IC_NT=${COUNT_IC} BLIS_JR_NT=${COUNT_JR} BLIS_IR_NT=${COUNT_IR} ${R_SAMPLE_BENCHMARK}
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LD_PRELOAD="${DIR_BLIS}/libblis.so" BLIS_JC_NT=${COUNT_JC} BLIS_IC_NT=${COUNT_IC} BLIS_JR_NT=${COUNT_JR} BLIS_IR_NT=${COUNT_IR} Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking BLIS"
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}
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@ -590,7 +594,7 @@ function cublas_check {
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echo "Started checking cuBLAS"
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NVBLAS_CONFIG_FILE="${DIR_CUBLAS}/nvblas.conf" LD_PRELOAD="/usr/lib/x86_64-linux-gnu/libnvblas.so.6.5 /usr/lib/x86_64-linux-gnu/libcublas.so.6.5" ${R_SAMPLE_BENCHMARK}
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NVBLAS_CONFIG_FILE="${DIR_CUBLAS}/nvblas.conf" LD_PRELOAD="/usr/lib/x86_64-linux-gnu/libnvblas.so.6.5 /usr/lib/x86_64-linux-gnu/libcublas.so.6.5" Rscript ${R_BENCHMARK_SCRIPT}
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echo "Finished checking cuBLAS"
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}
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@ -611,6 +615,15 @@ else
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nproc_cpus)
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NPROC=${PROCESSOR_CPUS}
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;;
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test_sample)
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R_BENCHMARK_SCRIPT="sample-benchmark.R"
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;;
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test_urbanek)
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R_BENCHMARK_SCRIPT="R-benchmark-25.R"
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;;
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test_revolution)
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R_BENCHMARK_SCRIPT="revolution-benchmark.R"
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;;
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*)
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$i
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esac
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