mirror of
https://github.com/andre-wojtowicz/blas-benchmarks
synced 2024-11-24 23:45:27 +01:00
removed hiplarb and culatoos;
added removing cpu packages; added deps for cuda online install
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parent
a9b174d0eb
commit
c3d9bdce84
158
install-env.sh
158
install-env.sh
@ -6,10 +6,6 @@ CHECKPOINT_DATE="2016-04-01"
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R_SAMPLE_BENCHMARK="Rscript sample-benchmark.R"
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DIR_BLAP="/opt/blap-lib"
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#TODO:
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# - leave installed packages
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# - after installation export "LD_PRELOAD"s
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function mro_install {
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echo "Started installing Microsoft R Open and dependencies"
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@ -40,11 +36,15 @@ function mro_install {
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# prepare R checkpoint
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mkdir ~/.checkpoint
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Rscript -e "library(checkpoint); checkpoint('${CHECKPOINT_DATE}')"
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sed -i "1i\library(checkpoint); checkpoint('${CHECKPOINT_DATE}', scanForPackages=FALSE, verbose=FALSE)" sample-benchmark.R
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#sed -i "1i\library(checkpoint); checkpoint('${CHECKPOINT_DATE}', scanForPackages=FALSE, verbose=FALSE)" sample-benchmark.R
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#TODO: add new .libPaths()
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# make directory for BLAS and LAPACK libraries
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mkdir -p ${DIR_BLAP}
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# detect logical and physical cores
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# Rscript -e "parallel::detectCores(1, logical=F)"
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# clean archives
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apt-get clean
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@ -77,6 +77,8 @@ function netlib_install {
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cp /usr/lib/libblas/libblas.so.3.0 ${DIR_NETLIB}
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cp /usr/lib/lapack/liblapack.so.3.0 ${DIR_NETLIB}
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apt-get -y purge libblas3 liblapack3
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apt-get -y autoremove
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apt-get clean
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echo "Installed files:"
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@ -85,6 +87,15 @@ function netlib_install {
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echo "Finished installing netlib."
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}
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function netlib_remove {
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echo "Started removing netlib"
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rm ${DIR_NETLIB} -r
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echo "Finished removing netlib."
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}
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function netlib_check {
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echo "Started checking netlib."
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@ -115,6 +126,7 @@ function atlas_st_install {
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cp /usr/lib/atlas-base/atlas/libblas.so.3 ${DIR_ATLAS_ST}
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cp /usr/lib/atlas-base/atlas/liblapack.so.3 ${DIR_ATLAS_ST}
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apt-get -y purge libatlas3-base
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apt-get clean
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echo "Installed files:"
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@ -132,6 +144,15 @@ function atlas_st_check {
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echo "Finished checking ATLAS (single-threaded)"
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}
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function atlas_st_remove {
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echo "Started removing ATLAS (single-threaded)"
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rm ${DIR_ATLAS_ST} -r
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echo "Finished removing ATLAS (single-threaded)"
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}
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##############################################################
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# OpenBLAS #
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# - http://www.openblas.net/ #
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@ -153,6 +174,7 @@ function openblas_install {
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cp /usr/lib/openblas-base/libblas.so.3 ${DIR_OPENBLAS}
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cp /usr/lib/openblas-base/liblapack.so.3 ${DIR_OPENBLAS}
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apt-get -y purge libopenblas-base
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apt-get clean
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echo "Installed files:"
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@ -170,6 +192,15 @@ function openblas_check {
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echo "Finished checking OpenBLAS"
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}
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function openblas_remove {
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echo "Started removing OpenBLAS"
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rm ${DIR_OPENBLAS} -r
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echo "Finished removing OpenBLAS"
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}
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##############################################################
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# ATLAS (mt) #
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# - http://math-atlas.sourceforge.net/ #
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@ -218,6 +249,15 @@ function atlas_mt_check {
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echo "Finished checking ATLAS (multi-threaded)"
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}
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function atlas_mt_remove {
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echo "Started removing ATLAS (multi-threaded)"
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rm ${DIR_ATLAS_MT} -r
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echo "Finished removing ATLAS (multi-threaded)"
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}
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##############################################################
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# GotoBLAS2 #
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# - https://prs.ism.ac.jp/~nakama/SurviveGotoBLAS2/ #
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@ -271,6 +311,15 @@ function gotoblas2_check {
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echo "Finished checking GotoBLAS2"
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}
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function gotoblas2_remove {
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echo "Started removing GotoBLAS2"
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rm ${DIR_GOTOBLAS2} -r
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echo "Finished removing GotoBLAS2"
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}
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##############################################################
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# MKL #
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# - https://mran.microsoft.com/documents/rro/multithread/ #
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@ -309,6 +358,15 @@ function mkl_check {
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echo "Finished checking MKL"
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}
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function mkl_remove {
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echo "Started removing MKL"
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rm ${DIR_MKL} -r
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echo "Finished removing MKL"
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}
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##############################################################
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# BLIS #
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# - https://github.com/flame/blis #
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@ -352,6 +410,15 @@ function blis_check {
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echo "Finished checking BLIS"
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}
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function blis_remove {
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echo "Started removing BLIS"
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rm ${DIR_BLIS} -r
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echo "Finished removing BLIS"
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}
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##############################################################
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##############################################################
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## GPU ##
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@ -376,7 +443,6 @@ function cublas_install {
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modprobe -r nouveau
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DEBIAN_FRONTEND=noninteractive apt-get install linux-headers-$(uname -r|sed 's,[^-]*-[^-]*-,,') nvidia-driver nvidia-modprobe libcuda1 libnvblas6.0 -y -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew"
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# TODO: optimus - bbswitch ?
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nvidia-modprobe
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@ -391,13 +457,25 @@ function cublas_install {
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echo "Finished installing cuBLAS"
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}
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#TODO: switch to 7.5
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function cublas_get_online {
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function cublas_online_install {
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# Ubuntu dependencies
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wget ${WGET_OPTIONS} http://de.archive.ubuntu.com/ubuntu/pool/main/x/x-kit/python3-xkit_0.5.0ubuntu2_all.deb
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wget ${WGET_OPTIONS} http://de.archive.ubuntu.com/ubuntu/pool/main/s/screen-resolution-extra/screen-resolution-extra_0.17.1_all.deb
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gdebi -n python3-xkit_0.5.0ubuntu2_all.deb
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gdebi -n screen-resolution-extra_0.17.1_all.deb
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wget ${WGET_OPTIONS} http://developer.download.nvidia.com/compute/cuda/repos/ubuntu1504/x86_64/cuda-repo-ubuntu1504_7.5-18_amd64.deb
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dpkg -i cuda-repo-ubuntu1504_7.5-18_amd64.deb
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apt-get update
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#TODO: install packages
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rm python3-xkit_0.5.0ubuntu2_all.deb
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rm screen-resolution-extra_0.17.1_all.deb
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rm cuda-repo-ubuntu1504_7.5-18_amd64.deb
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apt-get clean
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}
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function cublas_check {
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@ -420,7 +498,7 @@ function clblas_install {
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echo "Started installing clBLAS"
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# opencl 1.2
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#TODO: opencl 1.2
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apt-get install libboost-dev liblapack-dev libboost-program-options-dev opencl-headers nvidia-opencl-dev -y
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wget ${WGET_OPTIONS} https://github.com/clMathLibraries/clBLAS/archive/v2.10.tar.gz -O clBLAS-2.10.tar.gz
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@ -440,68 +518,6 @@ function clblas_install {
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echo "Finished installing clBLAS"
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}
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##############################################################
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# MAGMA #
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# - http://icl.cs.utk.edu/magma/software/ #
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# - LAPACK #
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# - OpenCL, CUDA #
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##############################################################
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DIR_MAGMA="${DIR_BLAP}/magma"
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function magma_install {
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echo "Started installing MAGMA"
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apt-get install nvidia-cuda-toolkit libopenblas-dev -y
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apt-get clean
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wget http://icl.cs.utk.edu/projectsfiles/magma/downloads/magma-2.0.2.tar.gz
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tar -xvf magma-2.0.2.tar.gz
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rm magma-2.0.2.tar.gz
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cd magma-2.0.2
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sed -i '7s/.*/include make.inc.openblas/' Makefile
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sed -i '18s/.*/GPU_TARGET = Fermi/' make.inc.openblas # TODO: auto choose
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sed -i '64s/.*/OPENBLASDIR = \/usr/' make.inc.openblas
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sed -i '65s/.*/CUDADIR = \/usr/' make.inc.openblas
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make -j `nproc`
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cp lib/libmagma.so ${DIR_MAGMA}
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cd ..
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rm -r magma-2.0.2
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echo "Finished installing MAGMA"
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}
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function magma_check {
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echo "Started checking MAGMA"
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LD_PRELOAD="${DIR_MAGMA}/libmagma.so" ${R_SAMPLE_BENCHMARK}
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echo "Finished checking MAGMA"
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}
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##############################################################
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# CULA #
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# - http://www.culatools.com/ #
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# - LAPACK #
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# - CUDA #
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##############################################################
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function cula_install {
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echo "Started installing CULA"
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echo "TODO!"
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echo "Finished installing CULA"
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}
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##############################################################
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##############################################################
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