Bump version (fix)

As Polish letters were broken in PDF

CHANGELOG.md

@@ -1,4 +1,137 @@
 
+<a name="5.5.0"></a>
+## 5.5.0 (2023-10-03)
+
+Updates:
+
+* Update Coling template
+
+Fixes:
+
+* Remove some broken tests
+
+<a name="5.4.6"></a>
+## 5.4.6 (2022-12-20)
+
+Bug fixes:
+
+* Fix setting up Overleaf
+
+<a name="5.4.5"></a>
+## 5.4.5 (2022-12-20)
+
+Improvements:
+
+* fill in some fields in LLNCS
+* add test for amu-en
+
+<a name="5.4.4"></a>
+## 5.4.4 (2022-12-19)
+
+Bug fixes:
+
+* update LLNCS URL
+
+<a name="5.4.3"></a>
+## 5.4.3 (2022-11-09)
+
+Bug fixes:
+
+* Fix updating on MacOS
+
+<a name="5.4.2"></a>
+## 5.4.2 (2022-11-09)
+
+Bug fixes:
+
+* Fix running on MacOS
+* Download ACM template correctly
+* Remove deprecated egrep/fgrep
+
+<a name="5.4.1"></a>
+## 5.4.1 (2022-10-29)
+
+Bug fixes:
+
+* Fix SCITEPRESS template
+
+<a name="5.4.0"></a>
+## 5.4.0 (2022-10-29)
+
+Enhancements:
+
+* Add SCITEPRESS template
+
+Bug fixes:
+
+* Fix downloading LLNCS template
+
+
+<a name="5.3.1"></a>
+## 5.3.1 (2022-06-06)
+
+Enhancements:
+
+* (Optionall) run an external checker
+
+Bug fixes:
+
+* Improve extracting sentences from Polish "amu" works
+* Fix proselint fail
+* Do not install pyminder if not needed
+
+<a name="5.3.0"></a>
+## 5.3.0 (2022-04-13)
+
+Enhancements:
+
+* Add ieee-conf template
+
+<a name="5.2.3"></a>
+## 5.2.3 (2022-02-14)
+
+Bug fixes:
+
+* Fix Jenkinsfile
+
+<a name="5.2.2"></a>
+## 5.2.2 (2022-02-12)
+
+Bug fixes:
+
+* Updating with the right version
+
+<a name="5.2.1"></a>
+## 5.2.1 (2022-02-12)
+
+Bug fixes:
+
+* Issue with contribution declaration
+
+Improvements:
+
+* Improve the defaults for thesis templates
+
+<a name="5.2.0"></a>
+## 5.2.0 (2022-02-12)
+
+Enhancements:
+
+* Contribution declarations are optional now
+
+<a name="5.1.0"></a>
+## 5.1.0 (2022-01-22)
+
+Enhancements:
+
+* Add Beeminder support (you can add an [Odometer
+  goal](https://help.beeminder.com/article/68-odometer-goals) to track
+  pages)
+
+Bug fixes:
+
+* Remove unwanted line in stats output
+
 <a name="5.0.0"></a>
 ## 5.0.0 (2022-01-17)
 

README.md

@@ -6,8 +6,8 @@ The template itself is in the `{{cookiecutter.paper_id}}-paper`.
 In order to generate a project from the template:
 
 * install cookiecutter
-* find a paper-cutter tag applicable (usually the latest tag listed at <https://git.wmi.amu.edu.pl/filipg/paper-cutter/releases>), say 5.0.0
-* run: `cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.0.0`
+* find a paper-cutter tag applicable (usually the latest tag listed at <https://git.wmi.amu.edu.pl/filipg/paper-cutter/releases>), say 5.5.1
+* run: `cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.5.1`
 
 You will be asked to choose a LaTeX template, at the moment the
 following templates are handled:
@@ -18,13 +18,15 @@ following templates are handled:
 * Natural Language Engineering journal (`nle`),
 * ACM SIGCONF template (`sigconf`), e.g. for the SIGIR conference,
 * MSc thesis at Warsaw University of Technology (`pw-thesis`)
-* COLING (`coling`)
+* COLING (& LREC, `coling`)
 * LLNCS (`llncs`)
 * EMNLP (`emnlp`)
 * NeurIPS (`neurips`)
 * ICML (`icml`)
 * IEEE Access (`ieee-access`)
+* IEEE Conf, e.g. FedCSIS (`ieee-conf`)
 * PolEval (`poleval`)
+* SCITEPRESS (`scitepress`, e.g. CSEDU conference)
 * Msc thesis at Adam Mickiewicz University, Faculty of Mathematics and Computer Science (`amu`),
   template prepared by Bartłomiej Przybylski (https://github.com/bprzybylski/amuthesis)
 
@@ -57,7 +59,7 @@ git remote set-url origin YOUR-GIT-REPO
    password: `git config credential.helper "cache --timeout=10000000"`
 8. Unfortunately, Overleaf will discard hidden files (`.*`) when a zip
    is uploaded, also file permissions will be somewhat broken
-9.  … so you need to copy `.cookiecutter.yml` file and re-apply the template (`cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.0.0 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists`)
+9.  … so you need to copy `.cookiecutter.yml` file and re-apply the template (`cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.5.1 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists`)
 10. Re-commit the files (including recovered `.*` files).
 11. Push the repo to Overleaf (fortunately, the `.*` will be treated
    correctly when this is done by git): `git push overleaf master`
@@ -71,10 +73,10 @@ Updating package with updated template
 To keep your codebase in sync with template you need to occasionally reapply the template.
 Here's how:
 
-* find a paper-cutter tag applicable, say 5.0.0
+* find a paper-cutter tag applicable, say 5.5.1
 * (do *not* refer to master in your projects!)
 * go to project root
-* run: `cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.0.0 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists`
+* run: `cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.5.1 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists`
 * check changes with git
 
 Editing the files
@@ -97,7 +99,7 @@ Switching to another conference or journal template is easy.
    If not, get in touch with Filip Graliński.
 2. Commit or stash any uncommitted changes.
 3. Change the `latex_template` value accordingly in the `.cookiecutter.yml` file. Commit the changes.
-4. Re-run the template (as if updating, see above: `cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.0.0 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists`).
+4. Re-run the template (as if updating, see above: `cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.5.1 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists`).
 5. Compare `metadata.tex` against the right metadata template file
    (`*/*-template-meta.tex` in `_latex-templates/`) and make any fixes
    needed. This is the only thing that needs to be done manually
@@ -122,6 +124,17 @@ Some notes:
   conflicting with Jinja directives (usually the whole or parts of `...-template.tex` and `...-template-meta.tex`
   files.
 
+MacOS Requirements
+------------
+
+```
+brew install cookiecutter
+brew install texlive
+brew install biber
+brew install pyyaml
+pip3 install syntok jinja2 arxiv_latex_cleaner
+```
+
 Versioning the template
 -----------------------
 
@@ -159,7 +172,7 @@ Variables to be set in GitLab UI
 
 ## Authors
 
-Prepared by Filip Graliński (Applica.ai).
+Prepared by Filip Graliński (while at Adam Mickiewicz University / Applica.ai).
 
 ### Contributors
 

cookiecutter.json

@@ -10,10 +10,12 @@
     "git_host": "git.wmi.amu.edu.pl",
     "locale": "en_US",
     "with_appendix": "no",
-    "extra_locale": "{{ 'none' if cookiecutter.latex_template != 'pw-thesis' else 'pl_PL' }}",
-    "with_arxiv_package": "{{ 'yes' if cookiecutter.latex_template != 'pw-thesis' else 'no' }}",
+    "extra_locale": "{{ 'none' if cookiecutter.latex_template != 'pw-thesis' and cookiecutter.latex_template != 'amu' else 'pl_PL' }}",
+    "with_arxiv_package": "{{ 'yes' if cookiecutter.latex_template != 'pw-thesis' and cookiecutter.latex_template != 'amu' else 'no' }}",
     "discipline": "none",
     "specialization": "none",
     "supervisor": "none",
-    "album_no": "none"
+    "album_no": "none",
+    "beeminder_support": "no",
+    "contribution_declaration": "{{ 'yes' if cookiecutter.latex_template != 'pw-thesis' and cookiecutter.latex_template != 'amu' else 'no' }}"
 }

hooks/post_gen_project.sh

@@ -6,7 +6,7 @@ get_files()
     shift
     dump_dir=$(mktemp -d)
     dumped_file=$dump_dir/file.zip
-    wget -O $dumped_file "$url"
+    wget -U 'paper-cutter' -O $dumped_file "$url"
     (cd $dump_dir && unzip -j file.zip)
     for file in $@
     do
@@ -25,7 +25,7 @@ fix_noexpand_issue()
 {
     # see https://tex.stackexchange.com/questions/487428/patch-failed-in-emnlp-style-template
     file_to_be_patched="$1"
-    sed -i 's|{\\errmessage{\\noexpand patch failed}}|{}|g' "$1"
+    sed -i~ 's|{\\errmessage{\\noexpand patch failed}}|{}|g' "$1"
 }
 
 if [ "{{ cookiecutter.latex_template }}" = "vanilla" ]; then
@@ -54,7 +54,7 @@ elif [ "{{ cookiecutter.latex_template }}" = "nle" ]; then
     cp -r _latex-templates/nle-template.tex {{cookiecutter.paper_id}}.tex
     cp -r _latex-templates/nle-template-meta.tex metadata.tex
 elif [ "{{ cookiecutter.latex_template }}" = "sigconf" ]; then
-    get_files "https://www.acm.org/binaries/content/assets/publications/consolidated-tex-template/acmart-primary.zip" \
+    get_files "https://portalparts.acm.org/hippo/latex_templates/acmart-primary.zip" \
               acmart.cls \
               ACM-Reference-Format.bst
     cp -r _latex-templates/sigconf-template.tex {{cookiecutter.paper_id}}.tex
@@ -66,13 +66,14 @@ elif [ "{{ cookiecutter.latex_template }}" = "pw-thesis" ]; then
 
     cp -r _optional_files/_pw-thesis/* .
 elif [ "{{ cookiecutter.latex_template }}" = "coling" ]; then
-    get_files "https://coling2020.org/coling2020.zip" \
-              coling.bst \
-              coling2020.sty
-    cp -r _latex-templates/coling2020-template.tex {{cookiecutter.paper_id}}.tex
-    cp -r _latex-templates/coling2020-template-meta.tex metadata.tex
+    get_files "https://lrec-coling-2024.org/wp-content/uploads/2023/10/lrec-latex.zip" \
+              lrec-coling2024-natbib.bst \
+              lrec-coling2024.sty \
+              languageresource.bib
+    cp -r _latex-templates/coling-template.tex {{cookiecutter.paper_id}}.tex
+    cp -r _latex-templates/coling-template-meta.tex metadata.tex
 elif [ "{{ cookiecutter.latex_template }}" = "llncs" ]; then
-    get_files "ftp://ftp.springernature.com/cs-proceeding/llncs/llncs2e.zip" \
+    get_files "https://resource-cms.springernature.com/springer-cms/rest/v1/content/19238648/data/v6" \
               llncs.cls \
               splncs04.bst
     cp -r _latex-templates/llncs-template.tex {{cookiecutter.paper_id}}.tex
@@ -114,7 +115,19 @@ elif [ "{{ cookiecutter.latex_template }}" == "ieee-access" ]; then
     mkdir -p images
     cp -r _latex-templates/ieee-access-template-photo.png images/sample-photo.png
     # not compatible with tikz (and todonotes which is based on tikz)
-    sed -i 's/\\usepackage\[textsize=tiny\]{todonotes}/\\usepackage{todo}/' extras.tex
+    sed -i~ 's/\\usepackage\[textsize=tiny\]{todonotes}/\\usepackage{todo}/' extras.tex
+elif [ "{{ cookiecutter.latex_template }}" == "ieee-conf" ]; then
+    cp -r _latex-templates/ieee-conf-template.tex {{cookiecutter.paper_id}}.tex
+    cp -r _latex-templates/ieee-conf-template-meta.tex metadata.tex
+elif [ "{{ cookiecutter.latex_template }}" == "scitepress" ]; then
+    get_files "https://www.scitepress.org/documents/SCITEPRESS_Conference_Latex.zip" \
+              apalike.bst \
+              apalike.sty \
+              article.cls \
+              orcid.eps \
+              SCITEPRESS.sty
+    cp -r _latex-templates/scitepress-template.tex {{cookiecutter.paper_id}}.tex
+    cp -r _latex-templates/scitepress-template-meta.tex metadata.tex
 elif [ "{{ cookiecutter.latex_template }}" = "poleval" ]; then
     cp -r _latex-templates/poleval-template.tex {{cookiecutter.paper_id}}.tex
     cp -r _latex-templates/poleval-template-meta.tex metadata.tex
@@ -135,10 +148,23 @@ if [ "{{ cookiecutter.extra_locale }}" = "pl_PL" -o "{{ cookiecutter.locale }}"
     cp -r _optional_files/_pl_files/* .
 fi
 
+if [ "{{ cookiecutter.beeminder_support }}" = "yes" ]; then
+    cp -r _optional_files/_beeminder_support/* .
+fi
+
+if [ "{{ cookiecutter.contribution_declaration }}" = "yes" ]; then
+    cp -r _optional_files/_contribution_declaration/* .
+fi
+
 rm -rf _latex-templates _optional_files
 
 if [ -e .git ]; then
-    git checkout README.md main.tex abstract.tex preamble.tex metadata.tex bibliography.bib contributions.yaml
+    git checkout README.md main.tex abstract.tex preamble.tex metadata.tex bibliography.bib
+
+    if [ "{{ cookiecutter.contribution_declaration }}" = "yes" ]; then
+        git checkout contributions.yaml
+    fi
+
     for f in helpers/vars abstract-pl.tex keywords.tex keywords-pl.tex appendix.tex
     do
         git checkout $f || true

test/configs/amu-en.yml

@@ -0,0 +1,12 @@
+
+default_context:
+  latex_template: 'amu'
+  locale: 'pl_PL'
+  with_appendix: 'no'
+  extra_locale: 'en_US'
+  with_arxiv_package: 'no'
+  discipline: 'informatyka'
+  specialization: 'sztuczna inteligencja'
+  supervisor: 'prof. dr hab. Jan Nowak'
+  album_no: '123456'
+  contribution_declaration: 'no'

test/configs/amu.yml

@@ -9,3 +9,4 @@ default_context:
   specialization: 'sztuczna inteligencja'
   supervisor: 'prof. dr hab. Jan Nowak'
   album_no: '123456'
+  contribution_declaration: 'no'

test/configs/ieee-access.yml

@@ -1,5 +0,0 @@
-
-
-default_context:
-  latex_template: 'ieee-access'
-  with_arxiv_package: 'no'

test/configs/ieee-conf.yml

@@ -0,0 +1,5 @@
+
+
+default_context:
+  latex_template: 'ieee-conf'
+  with_arxiv_package: 'yes'

test/run_tests.sh

@@ -16,7 +16,7 @@ check()
     cd "$PAPER_DIR"
     make clean
     make
-    if [[ "$config_file" != "configs/pw-thesis.yml" && "$config_file" != "configs/amu.yml" && "$config_file" != "configs/ieee-access.yml" ]]
+    if [[ "$config_file" != "configs/pw-thesis.yml" && "$config_file" != "configs/amu.yml" && "$config_file" != "configs/ieee-access.yml" && "$config_file" != "configs/amu-en.yml" ]]
     then
         make arxiv-$PAPER_ID.tar.gz
     fi

{{cookiecutter.paper_repo_name}}/.cookiecutter.yml

@@ -16,3 +16,5 @@ default_context:
   specialization: '{{ cookiecutter.specialization }}'
   supervisor: '{{ cookiecutter.supervisor }}'
   album_no: '{{ cookiecutter.album_no }}'
+  beeminder_support: '{{ cookiecutter.beeminder_support }}'
+  contribution_declaration: '{{ cookiecutter.contribution_declaration }}'

{{cookiecutter.paper_repo_name}}/.gitlab-ci.yml

@@ -6,5 +6,5 @@ variables:
 # THIS IS AN UGLY WORK-AROUND
 include:
   - project: 'research/paper-cutter'
-    ref: '5.0.0'
+    ref: '5.5.1'
     file: 'main.yml'

{{cookiecutter.paper_repo_name}}/Jenkinsfile

@@ -1,46 +1,30 @@
 pipeline {
 
-    agent { label 'tau2013z' }
+    agent {
+        docker {
+            image 'loxygen/autozoil'
+        }
+    }
+
 
     stages {
 
-        stage ('get-autozoil') {
-            steps {
-                checkout([$class: 'GitSCM', branches: [[name: '*/master']], doGenerateSubmoduleConfigurations: false, extensions: [[$class: 'RelativeTargetDirectory', relativeTargetDir: 'autozoil']], submoduleCfg: [], userRemoteConfigs: [[url: 'https://gitlab.com/filipg/autozoil.git']]])
-            }
-        }
-
 	stage ('build-pdf') {
             steps {
-                sh """
+              withEnv(["HOME=${env.WORKSPACE}"]) {
+                          sh """
+{% if cookiecutter.beeminder_support == 'yes' %}
+pip3 install pyyaml pyminder
+{% endif %}
 make clean
 make
 """
-            }
+            }}
 
             post {
                 always {
                     archiveArtifacts artifacts: '{{cookiecutter.paper_id}}.pdf', fingerprint: true
                     archiveArtifacts artifacts: 'stats.txt', fingerprint: true
-
-                    plot csvFileName: 'stats.txt',
-                         csvSeries: [[
-                            file: 'stats.txt',
-                            exclusionValues: '',
-                            displayTableFlag: false,
-                            inclusionFlag: 'OFF',
-                            url: '']],
-                         group: 'Plot Group',
-                         title: 'Plot Title',
-                         style: 'line',
-                         exclZero: false,
-                         keepRecords: false,
-                         logarithmic: false,
-                         numBuilds: '',
-                         useDescr: false,
-                         yaxis: '',
-                         yaxisMaximum: '',
-                         yaxisMinimum: ''
                 }
             }
 
@@ -48,19 +32,33 @@ make
 
 	stage ('autozoil') {
             steps {
-            sh """
+              withEnv(["HOME=${env.WORKSPACE}"]) {
+              sh """
 rm -f autozoil.xml
-AUTOZOIL_DIR=autozoil make autozoil.xml
+make autozoil
 """
-            }
+            }}
 
             post {
                 always {
-                    archiveArtifacts artifacts: 'autozoil.xml', fingerprint: true
-                    junit 'autozoil.xml'
+                    archiveArtifacts artifacts: 'autozoil*.xml', fingerprint: true
+                    junit testResults: 'autozoil-external-check.xml',  skipPublishingChecks: true
+//                    junit testResults: 'autozoil.xml'
                 }
             }
 	}
 
+
+{% if cookiecutter.beeminder_support == 'yes' %}
+        stage ('beeminder') {
+            steps {
+               withCredentials([string(credentialsId: 'Beeminder', variable: 'BEEMINDER_TOKEN')]) {
+                          sh """
+BEEMINDER_USER=ptlen make logbeeminder
+"""
+          }
+        }
+      }
+{% endif %}
     }
 }

{{cookiecutter.paper_repo_name}}/Makefile

@@ -1,4 +1,4 @@
-SHELL=/bin/bash -O globstar
+SHELL=/bin/bash
 
 # Do not edit these values, they should be changed by modifying .cookiecutter.yml
 # and re-applying the template
@@ -7,12 +7,14 @@ HAS_APPENDIX={{cookiecutter.with_appendix}}
 LATEX_TEMPLATE={{cookiecutter.latex_template}}
 WITH_ARXIV_PACKAGE={{cookiecutter.with_arxiv_package}}
 
-CONTENT_TEX_SOURCES=$(filter-out $(PAPER_ID).tex config.tex extras.tex metadata.tex preamble.tex the-appendix.tex, $(shell ls **/*.tex))
+CONTENT_TEX_SOURCES=$(filter-out $(PAPER_ID).tex config.tex extras.tex metadata.tex preamble.tex the-appendix.tex, $(shell find . -name '*.tex'))
 
 CURRENT_DIR=$(shell pwd)
 AUTOZOIL_DIR?=/opt/autozoil
 AUTOZOIL_LOCALE={{cookiecutter.locale}}
 
+EXTERNAL_PLAIN_TEXT_CHECKER=
+
 space := $(subst ,, )
 
 ifneq (,$(wildcard appendix.tex))
@@ -38,9 +40,17 @@ SCOREFILES=$(shell perl extract-score-files.pl $(CONTENT_TEX_SOURCES))
 clean_latex_stuff=rm -rf *.aux *.nav *.toc *.log *.out *.blg *.bbl autozoil-log.txt autozoil.xml the-appendix.pdf supplement.zip $(PAPER_ID).pdf $(PAPER_ID).zip arxiv-$(PAPER_ID).pdf arxiv-$(PAPER_ID).tar.gz abstract.txt sentences.txt stats.txt $(EXTRA_PDFS) helpers/$(PAPER_ID)-contribution-declaration.tex helpers/$(PAPER_ID)-contribution-declaration.pdf helpers/*.aux helpers/*.bbl helpers/*.bcf helpers/*.blg helpers/*.log helpers/*.run.xml
 
 ifeq ($(HAS_SUPPLEMENT),yes)
+{% if cookiecutter.contribution_declaration == 'yes' %}
 all: $(PAPER_ID).pdf abstract.txt supplement.zip stats.txt sentences.txt helpers/$(PAPER_ID)-contribution-declaration.pdf
+{% else %}
+all: $(PAPER_ID).pdf abstract.txt supplement.zip stats.txt sentences.txt
+{% endif %}
 else
+{% if cookiecutter.contribution_declaration == 'yes' %}
 all: $(PAPER_ID).pdf abstract.txt stats.txt sentences.txt helpers/$(PAPER_ID)-contribution-declaration.pdf
+{% else %}
+all: $(PAPER_ID).pdf abstract.txt stats.txt sentences.txt
+{% endif %}
 endif
 
 source-pack: $(PAPER_ID).zip
@@ -49,6 +59,11 @@ stats.txt: $(PAPER_ID).pdf helpers/stats.sh
 	bash helpers/stats.sh $< > $@
 	cat $@
 
+{% if cookiecutter.beeminder_support == 'yes' %}
+logbeeminder: helpers/logbeeminder.py stats.txt
+	python3	$<
+{% endif %}
+
 $(PAPER_ID).pdf: $(PAPER_ID).tex preamble.tex metadata.tex $(CONTENT_TEX_SOURCES) bibliography.bib $(SCOREFILES) $(EXTRA_PDFS)
 	pdflatex $<
 	bibtex $(PAPER_ID)
@@ -59,8 +74,21 @@ $(PAPER_ID).pdf: $(PAPER_ID).tex preamble.tex metadata.tex $(CONTENT_TEX_SOURCES
 abstract.txt: abstract.tex
 	cat $< | perl -pne 's/noqa\{[^}]+\}//g' | detex > $@
 
+SENTENCE_EXTRACTION_METHOD=from-pdf
+
+ifeq ($(LATEX_TEMPLATE),amu)
+ifeq ($(AUTOZOIL_LOCALE),pl_PL)
+SENTENCE_EXTRACTION_METHOD=from-tex
+endif
+endif
+
+ifeq ($(SENTENCE_EXTRACTION_METHOD),from-tex)
+sentences.txt: $(PAPER_ID).tex helpers/get-sentences.sh helpers/pdf-to-plain-text.sh helpers/strip-references.pl
+	bash helpers/get-sentences.sh $< from-tex > $@
+else
 sentences.txt: $(PAPER_ID).pdf helpers/get-sentences.sh helpers/pdf-to-plain-text.sh helpers/strip-references.pl
 	bash helpers/get-sentences.sh $< > $@
+endif
 
 scores/%.txt:
 	mkdir -p scores
@@ -69,6 +97,16 @@ scores/%.txt:
 autozoil-log.txt: $(CONTENT_TEX_SOURCES)
 	cd $(AUTOZOIL_DIR) && set -o pipefail && ./autozoil --locale $(AUTOZOIL_LOCALE) $(CONTENT_TEX_SOURCES_WITH_DIR) --alt-log-file $(CURRENT_DIR)/$(PAPER_ID).log | tee $(CURRENT_DIR)/$@
 
+
+ifeq ($(EXTERNAL_PLAIN_TEXT_CHECKER),)
+autozoil: autozoil.xml
+else
+autozoil: autozoil.xml autozoil-external-check.xml
+
+autozoil-external-check.xml: sentences.txt
+	curl -X POST -H "Content-Type: multipart/form-data" -F "file=@sentences.txt" $(EXTERNAL_PLAIN_TEXT_CHECKER) > $@
+endif
+
 autozoil.xml: $(CONTENT_TEX_SOURCES)
 	cd $(AUTOZOIL_DIR) && set -o pipefail && ./autozoil --locale $(AUTOZOIL_LOCALE) $(CONTENT_TEX_SOURCES_WITH_DIR) --format xml --alt-log-file $(CURRENT_DIR)/$(PAPER_ID).log --exit-with-zero > $(CURRENT_DIR)/autozoil.xml
 
@@ -104,7 +142,7 @@ titlepage.pdf: titlepage.tex
 	xelatex $<
 endif
 
-
+{% if cookiecutter.contribution_declaration == 'yes' %}
 helpers/$(PAPER_ID)-contribution-declaration.pdf: helpers/$(PAPER_ID)-contribution-declaration.tex bibliography.bib
 	(cd helpers && pdflatex $(PAPER_ID)-contribution-declaration.tex)
 	(cd helpers && biber $(PAPER_ID)-contribution-declaration)
@@ -112,7 +150,7 @@ helpers/$(PAPER_ID)-contribution-declaration.pdf: helpers/$(PAPER_ID)-contributi
 
 helpers/$(PAPER_ID)-contribution-declaration.tex: contributions.yaml helpers/contribution-declaration.tex.tmpl helpers/generate-contribution-declaration.py
 	(cd helpers && python3 generate-contribution-declaration.py) < $< > $@
-
+{% endif %}
 
 clean:
 	$(clean_latex_stuff)

{{cookiecutter.paper_repo_name}}/_latex-templates/amu-template-meta.tex

@@ -21,7 +21,7 @@
 
 % --- Tytuł pracy (w języku polskim i angielskim)
 \titlePL{ {{ cookiecutter.paper_title }} }
-\titleEN{My thesis}
+\titleEN{PUT YOUR TITLE IN ENGLISH!!!!!!!!}
 % --- Typ pracy (inżynierska, licencjacka, magisterska)
 \type{magisterska}
 % --- Wydział (wykaz skrótów):
@@ -56,8 +56,10 @@
 % --- Promotor (w dopełniaczu)
 \supervisor{ {{ cookiecutter.supervisor }} }
 % --- Data złożenia pracy (Miasto, miesiąc rok)
-\date{Poznań, grudzień 2020}
+\newcommand{\monthname}{\ifcase \month \or styczeń\or luty\or marzec\or kwiecień\or maj%
+\or czerwiec\or lipiec\or sierpień\or wrzesień\or październik\or listopad\or grudzień\fi}
 
+\date{Poznań, \monthname{} \the\year}
 % --- Zgoda na udostępnienie pracy w czytelni (TAK/NIE)
 \stread{TAK}
 % --- Zgoda na udostępnienie pracy w zakresie ochrony (TAK/NIE)

{{cookiecutter.paper_repo_name}}/_latex-templates/coling-template-meta.tex

@@ -0,0 +1,9 @@
+\title{ {{ cookiecutter.paper_title }} }
+
+\name{ {{cookiecutter.main_contributor_name}} }
+{% raw %}
+\address{Affiliation1, Affiliation2, Affiliation3 \\
+         Address1, Address2, Address3 \\
+         author1@xxx.yy, author2@zzz.edu, author3@hhh.com\\
+         \{author1, author5, author9\}@abc.org\\}
+{% endraw %}

{{cookiecutter.paper_repo_name}}/_latex-templates/coling-template.tex

@@ -0,0 +1,42 @@
+{% raw %}
+% LREC-COLING 2024 Example;
+% LREC Is now using templates similar to the ACL ones.
+\documentclass[10pt, a4paper]{article}
+
+\usepackage[review]{lrec-coling2024} % this is the new style
+
+\input{config}
+\input{extras}
+\input{preamble}
+\input{metadata}
+
+\newcommand\bycite[1]{in~\citet{#1}}
+
+\abstract{
+\input{abstract}
+ \\ \newline \Keywords{keyword1, keyword2, keyword3} }
+
+\begin{document}
+
+\maketitleabstract
+
+\input{main}
+
+\nocite{*}
+\section{Bibliographical References}\label{sec:reference}
+
+\bibliographystyle{lrec-coling2024-natbib}
+\bibliography{bibliography}
+
+\section{Language Resource References}
+\label{lr:ref}
+\bibliographystylelanguageresource{lrec-coling2024-natbib}
+\bibliographylanguageresource{languageresource}
+
+
+\end{document}
+%%% Local Variables:
+%%% mode: latex
+%%% TeX-master: t
+%%% End:
+{% endraw %}

{{cookiecutter.paper_repo_name}}/_latex-templates/coling2020-template-meta.tex

@@ -1,14 +0,0 @@
-{% raw %}
-\title{Insert your title}
-
-\author{First Author \\
-  Affiliation / Address line 1 \\
-  Affiliation / Address line 2 \\
-  Affiliation / Address line 3 \\
-  \texttt{email@domain} \\\And
-  Second Author \\
-  Affiliation / Address line 1 \\
-  Affiliation / Address line 2 \\
-  Affiliation / Address line 3 \\
-  \texttt{email@domain} \\}
-{% endraw %}

{{cookiecutter.paper_repo_name}}/_latex-templates/coling2020-template.tex

@@ -1,73 +0,0 @@
-{% raw %}
-\pdfoutput=1
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-% [paper-cutter clarifications]
-%
-% DO NOT EDIT THIS FILE (unless you know what you are doing).
-% THIS IS A FILE SUPPLIED BY THE TEMPLATE.
-% PLEASE EDIT main.tex INSTEAD.
-%
-%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
-%
-% File coling2020.tex
-%
-% Contact: feiliu@cs.ucf.edu & liang.huang.sh@gmail.com
-%% Based on the style files for COLING-2018, which were, in turn,
-%% Based on the style files for COLING-2016, which were, in turn,
-%% Based on the style files for COLING-2014, which were, in turn,
-%% Based on the style files for ACL-2014, which were, in turn,
-%% Based on the style files for ACL-2013, which were, in turn,
-%% Based on the style files for ACL-2012, which were, in turn,
-%% based on the style files for ACL-2011, which were, in turn,
-%% based on the style files for ACL-2010, which were, in turn,
-%% based on the style files for ACL-IJCNLP-2009, which were, in turn,
-%% based on the style files for EACL-2009 and IJCNLP-2008...
-
-%% Based on the style files for EACL 2006 by
-%%e.agirre@ehu.es or Sergi.Balari@uab.es
-%% and that of ACL 08 by Joakim Nivre and Noah Smith
-
-\newcommand\citep[1]{\cite{#1}}
-\newcommand\citet[1]{\newcite{#1}}
-\newcommand\bycite[1]{by~\citet{#1}}
-
-\documentclass[11pt]{article}
-\usepackage{coling2020}
-\usepackage{times}
-\usepackage{url}
-\usepackage{latexsym}
-
-%\setlength\titlebox{5cm}
-
-% You can expand the titlebox if you need extra space
-% to show all the authors. Please do not make the titlebox
-% smaller than 5cm (the original size); we will check this
-% in the camera-ready version and ask you to change it back.
-
-\input{config}
-\input{extras}
-\input{preamble}
-\input{metadata}
-
-\begin{document}
-\maketitle
-\begin{abstract}
-\input{abstract}
-\end{abstract}
-
-\input{main}
-
-\bibliography{bibliography}
-\bibliographystyle{coling}
-
-\ifwithappendix
-\typeout{!!! APPENDIX WILL BE SKIPPED FOR THIS TEMPLATE. !!!}
-\fi
-
-\end{document}
-
-%%% Local Variables:
-%%% mode: latex
-%%% TeX-master: t
-%%% End:
-{% endraw %}

{{cookiecutter.paper_repo_name}}/_latex-templates/ieee-conf-template-meta.tex

@@ -0,0 +1,18 @@
+\title{ {{ cookiecutter.paper_title }} }
+%
+%
+\author{
+\IEEEauthorblockN{ {{ cookiecutter.main_contributor_name }} }
+\IEEEauthorblockA{
+University of This and That\\
+in Flatland\\
+ul.\ XYZ 111, 12-345 Flatcity, Flatland\\
+Email: abc@flatland.edu}
+\and
+\IEEEauthorblockN{Second Author, Third Author}
+\IEEEauthorblockA{Universit\'{e} de Paris-Sud,\\
+Laboratoire d'Analyse Num\'{e}rique,\\
+B\^{a}timent 425,\\
+F-91405 Orsay Cedex, France\\
+Email: \{second, third\}@subdomain.domain.fr}
+}

{{cookiecutter.paper_repo_name}}/_latex-templates/ieee-conf-template.tex

@@ -0,0 +1,58 @@
+{% raw %}
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+% [paper-cutter clarifications]
+%
+% DO NOT EDIT THIS FILE (unless you know what you are doing).
+% THIS IS A FILE SUPPLIED BY THE TEMPLATE.
+% PLEASE EDIT main.tex INSTEAD.
+%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+%
+%
+% Based on https://fedcsis.org/resources/latex.zip
+\documentclass[conference]{IEEEtran}
+
+% This package serves to balance the column lengths on the last page of the document.
+% please, insert \balance command in the left column of the last page
+\usepackage{balance}
+
+%% to enable \thank command
+\IEEEoverridecommandlockouts
+
+% to typeset algorithms
+\usepackage{algorithmic}
+\usepackage{algorithm}
+% to typeset code fragments
+\usepackage{listings}
+% to make an accent \k be available
+\usepackage[OT4,T1]{fontenc}
+% provides various features to facilitate writing math formulas and to improve the typographical quality of their output.
+\usepackage[cmex10]{amsmath}
+\interdisplaylinepenalty=2500
+% por urls typesetting and breaking
+\usepackage{url}
+% for vertical merging table cells
+\usepackage{multirow}
+
+\newcommand\bycite[1]{by~\cite{#1}}
+
+\input{config}
+\input{extras}
+\input{preamble}
+\input{metadata}
+
+
+\begin{document}
+\maketitle              % typeset the title of the contribution
+
+\begin{abstract}
+\input{abstract}
+\end{abstract}
+
+\input{main}
+
+\bibliographystyle{abbrv}
+\bibliography{bibliography}
+
+\end{document}
+{% endraw %}

{{cookiecutter.paper_repo_name}}/_latex-templates/llncs-template-meta.tex

@@ -1,13 +1,15 @@
+\title{ {{ cookiecutter.paper_title }}\thanks{Supported byorganization x.} }
 {% raw %}
-\title{Contribution Title\thanks{Supported by organization x.}}
 %
 %\titlerunning{Abbreviated paper title}
 % If the paper title is too long for the running head, you can set
 % an abbreviated paper title here
 %
-\author{First Author\inst{1}\orcidID{0000-1111-2222-3333} \and
+{% endraw %}
+\author{ {{cookiecutter.main_contributor_name}}\inst{1}\orcidID{0000-1111-2222-3333} \and
 Second Author\inst{2,3}\orcidID{1111-2222-3333-4444} \and
-Third Author\inst{3}\orcidID{2222--3333-4444-5555}}
+Third Author\inst{3}\orcidID{2222--3333-4444-5555} }
+{% raw %}
 %
 \authorrunning{F. Author et al.}
 % First names are abbreviated in the running head.

{{cookiecutter.paper_repo_name}}/_latex-templates/scitepress-template-meta.tex

@@ -0,0 +1,6 @@
+\title{ {{cookiecutter.paper_title}} }
+\author{\authorname{ {{cookiecutter.main_contributor_name}}\sup{1}\orcidAuthor{0000-0000-0000-0000}, Second Author Name\sup{1}\orcidAuthor{0000-0000-0000-0000} and Third Author Name\sup{2}\orcidAuthor{0000-0000-0000-0000}}
+\affiliation{\sup{1}Institute of Problem Solving, XYZ University, My Street, MyTown, MyCountry}
+\affiliation{\sup{2}Department of Computing, Main University, MySecondTown, MyCountry}
+\email{\{f\_author, s\_author\}@ips.xyz.edu, t\_author@dc.mu.edu}
+}

{{cookiecutter.paper_repo_name}}/_latex-templates/scitepress-template.tex

@@ -0,0 +1,60 @@
+{% raw %}
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+% [paper-cutter clarifications]
+%
+% DO NOT EDIT THIS FILE (unless you know what you are doing).
+% THIS IS A FILE SUPPLIED BY THE TEMPLATE.
+% PLEASE EDIT main.tex INSTEAD.
+%
+%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
+
+\documentclass[a4paper,twoside]{article}
+
+\usepackage{epsfig}
+\usepackage{subcaption}
+\usepackage{calc}
+\usepackage{amssymb}
+\usepackage{amstext}
+\usepackage{amsmath}
+\usepackage{amsthm}
+\usepackage{multicol}
+\usepackage{pslatex}
+\usepackage{apalike}
+\usepackage[bottom]{footmisc}
+
+\newcommand{\citep}{\cite}
+\newcommand{\citet}{\cite}
+\newcommand\bycite[1]{in~\citet{#1}}
+
+\input{config}
+\input{preamble}
+
+\usepackage{SCITEPRESS}
+\input{extras}
+
+\begin{document}
+
+\input{metadata.tex}
+
+\keywords{%
+  \input{keywords}
+}
+
+\abstract{%
+  \input{abstract}
+}
+
+\onecolumn \maketitle \normalsize \setcounter{footnote}{0} \vfill
+
+\input{main}
+
+\bibliographystyle{apalike}
+{\small
+\bibliography{bibliography}}
+
+\ifwithappendix
+\input{appendix}
+\fi
+
+\end{document}
+{% endraw %}

{{cookiecutter.paper_repo_name}}/_optional_files/_beeminder_support/helpers/logbeeminder.py

@@ -0,0 +1,37 @@
+#!/usr/bin/env python3
+
+import time
+from pyminder.pyminder import Pyminder
+import os
+import sys
+
+
+if 'BEEMINDER_USER' not in os.environ:
+    print('BEEMINDER_USER not set', file=sys.stderr)
+    exit(1)
+
+if 'BEEMINDER_TOKEN' not in os.environ:
+    print('BEEMINDER_TOKEN not set', file=sys.stderr)
+    exit(1)
+
+beeminder_user = os.environ['BEEMINDER_USER']
+beeminder_token = os.environ['BEEMINDER_TOKEN']
+
+
+pyminder = Pyminder(user=beeminder_user, token=beeminder_token)
+
+goal = pyminder.get_goal('{{cookiecutter.paper_id}}')
+
+with open('stats.txt', 'r') as stats_fh:
+    next(stats_fh)
+    stats = next(stats_fh)
+    page_count, _, _ = stats.split('\t')
+
+    print(f'reporting {page_count} pages', file=sys.stderr)
+
+    now = time.time()
+
+    goal.stage_datapoint(value=page_count,
+                         time=now)
+
+    goal.commit_datapoints()

{{cookiecutter.paper_repo_name}}/extras.tex

@@ -47,7 +47,7 @@
 \newcommand{\gonitobestentry}[1]{\gonitoref{#1} & \textbf{\minput{scores/#1.txt}}}
 
 % Autozoil-related commands
-\newcommand{\code}[1]{\texttt{#1}}
+\providecommand{\code}[1]{\texttt{#1}}
 \newcommand{\noqa}[1]{}
 \newcommand{\noqall}[1]{}
 \newcommand{\eng}[1]{\textit{#1}}

{{cookiecutter.paper_repo_name}}/helpers/flatten-structure.pl

@@ -8,7 +8,7 @@ use strict;
 binmode(STDIN, ':utf8');
 binmode(STDOUT, ':utf8');
 
-my $subdir_regexp = qr{(?:figures|images)};
+my $subdir_regexp = qr{(?:figures|images|plots)};
 
 sub fix_subdirs {
     my ($p) = @_;

{{cookiecutter.paper_repo_name}}/helpers/get-sentences.sh

@@ -1,3 +1,15 @@
 #!/bin/bash
 
-bash helpers/pdf-to-plain-text.sh "$1" | perl helpers/strip-references.pl | perl -pne 'chomp $_; $_.=" "' | python3 -m syntok.segmenter
+input_file="$1"
+method="$2"
+
+extract_text() {
+    if [[ "$method" == "from-tex" ]]
+    then
+        detex "$input_file" | grep -E '\S' | grep -v 'unsrt' | perl -pne 's/^\s+| +$//g'
+    else
+        bash helpers/pdf-to-plain-text.sh "$input_file" | perl helpers/strip-references.pl | perl -pne 'chomp $_; $_.=" "'
+    fi
+}
+
+extract_text | python3 -m syntok.segmenter | grep -E '\S'

{{cookiecutter.paper_repo_name}}/helpers/pdf-to-plain-text.sh

@@ -1,3 +1,3 @@
 #!/bin/bash
 
-pdftotext "$1" - | fgrep -v 'Confidential Review Copy' | grep -P -v '^(ACL 2020 Submission \*\*\*\. Confidential Review Copy\. DO NOT DISTRIBUTE\.|Anonymous ACL submission|Abstract|Results|Conclusions|https?://\S+)\s*$' | grep '[^[:space:]]' | egrep '[a-zA-Z]{2}' | perl -pne 's/\f//g;' | uniq
+pdftotext "$1" - | grep -F -v 'Confidential Review Copy' | grep -E -v '^(ACL 2020 Submission \*\*\*\. Confidential Review Copy\. DO NOT DISTRIBUTE\.|Anonymous ACL submission|Abstract|Results|Conclusions|https?://\S+)\s*$' | grep '[^[:space:]]' | grep -E '[a-zA-Z]{2}' | perl -pne 's/\f//g;' | uniq

{{cookiecutter.paper_repo_name}}/helpers/prepare-arxiv-package.sh

@@ -49,7 +49,7 @@ handle_subdir()
             then
                 perl helpers/flatten-structure.pl < "$f" > "$dst"
             else
-                cp $f $dst
+                cp "$f" "$dst"
             fi
         done
     fi
@@ -57,6 +57,7 @@ handle_subdir()
 
 handle_subdir images
 handle_subdir figures
+handle_subdir plots
 handle_subdir scores
 handle_subdir inputs
 
@@ -99,7 +100,9 @@ then
      :
 elif [[ "$latex_template" == "coling" ]]
 then
-     copy_to_project coling2020.sty coling.bst
+     copy_to_project lrec-coling2024-natbib.bst \
+              lrec-coling2024.sty \
+              languageresource.bib
 elif [[ "$latex_template" == "llncs" ]]
 then
     copy_to_project llncs.cls splncs04.bst
@@ -119,9 +122,19 @@ then
                      fancyhdr.sty \
                      icml2022.bst \
                      icml2022.sty
+elif [[ "$latex_template" == "scitepress" ]]
+then
+    copy_to_project apalike.bst \
+                    apalike.sty \
+                    article.cls \
+                    orcid.eps \
+                    SCITEPRESS.sty
 elif [[ "$latex_template" == "ieee-access" ]]
 then
      copy_to_project bullet.png ieeeaccess.cls IEEEtran.cls ieeeaccess.cls spotcolor.sty logo.png notaglinelogo.png
+elif [[ "$latex_template" == "ieee-conf" ]]
+then
+    :
 elif [[ "$latex_template" == "poleval" ]]
 then
      copy_to_project poleval.bst poleval.cls

{{cookiecutter.paper_repo_name}}/helpers/set-up-overleaf.sh

@@ -32,7 +32,8 @@ echo "paste here and press ENTER"
 
 read
 overleaf_git_url=$REPLY
-
+# remove "git clone" in case it was directly copied from Overleaf
+overleaf_git_url=${overleaf_git_url#git clone }
 overleaf_git_id=$(basename $overleaf_git_url)
 
 
@@ -55,7 +56,7 @@ cp ../$backup_dir/.cookiecutter.yml .
 git add .cookiecutter.yml
 git commit -m 'Back cookiecutter config'
 
-cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 4.7.0 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists
+cookiecutter https://git.wmi.amu.edu.pl/filipg/paper-cutter.git --checkout 5.5.1 --output-dir .. --config-file .cookiecutter.yml --no-input --overwrite-if-exists
 
 git add --all
 git commit -m 'Bring back all the files'

{{cookiecutter.paper_repo_name}}/helpers/stats.sh

@@ -1,7 +1,6 @@
 #!/bin/bash
 
 here_dir=$(dirname "$0")
-echo $here_dir
 
 pdf_file="$1"
 

{{cookiecutter.paper_repo_name}}/main.tex

@@ -1,5 +1,9 @@
 
+{% if cookiecutter.latex_template != 'pw-thesis' and cookiecutter.latex_template != 'amu' %}
 \section{Main}
+{% else %}
+\chapter{Main}
+{% endif %}
 
 This is a~sample paper~\cite{gonito2016}.
 See the experiments described \bycite{gonito2016}.
@@ -7,11 +11,20 @@ See the experiments described \bycite{gonito2016}.
 Please put your content here.
 
 
-
+{% if cookiecutter.latex_template != 'pw-thesis' and cookiecutter.latex_template != 'amu' %}
 \subsection{Gonito}
+{% else %}
+\section{Gonito}
+{% endif %}
 
 Gonito submission should be referenced like this
 \gonitoscore{6ab4979e4629c5559feba452b7ca74c0cac89ebb}%
 \footnote{Reference codes to repositories stored at
 Gonito.net~\cite{gonito2016} are given in curly brackets. Such a~repository may be also accessed by going
 to \url{http://gonito.net/q} and entering the code there.}
+
+{% if cookiecutter.latex_template != 'pw-thesis' and cookiecutter.latex_template != 'amu' %}
+\section{Yet another section}
+{% else %}
+\chapter{Yet another chapter}
+{% endif %}