Merge pull request #1178 from wetneb/url_caching

Add caching in URL fetching
This commit is contained in:
Jacky 2017-03-09 17:28:38 -05:00 committed by GitHub
commit 912600f0bd
8 changed files with 302 additions and 84 deletions

View File

@ -54,6 +54,7 @@ public class AddColumnByFetchingURLsCommand extends EngineDependentCommand {
int columnInsertIndex = Integer.parseInt(request.getParameter("columnInsertIndex"));
int delay = Integer.parseInt(request.getParameter("delay"));
String onError = request.getParameter("onError");
boolean cacheResponses = Boolean.parseBoolean(request.getParameter("cacheResponses"));
return new ColumnAdditionByFetchingURLsOperation(
engineConfig,
@ -62,7 +63,8 @@ public class AddColumnByFetchingURLsCommand extends EngineDependentCommand {
TextTransformOperation.stringToOnError(onError),
newColumnName,
columnInsertIndex,
delay
delay,
cacheResponses
);
}

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@ -43,6 +43,8 @@ import java.net.URLConnection;
import java.util.ArrayList;
import java.util.List;
import java.util.Properties;
import java.util.concurrent.TimeUnit;
import java.util.concurrent.ExecutionException;
import org.json.JSONException;
import org.json.JSONObject;
@ -71,6 +73,9 @@ import com.google.refine.operations.cell.TextTransformOperation;
import com.google.refine.process.LongRunningProcess;
import com.google.refine.process.Process;
import com.google.refine.util.ParsingUtilities;
import com.google.common.cache.CacheBuilder;
import com.google.common.cache.LoadingCache;
import com.google.common.cache.CacheLoader;
public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperation {
final protected String _baseColumnName;
@ -80,6 +85,7 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
final protected String _newColumnName;
final protected int _columnInsertIndex;
final protected int _delay;
final protected boolean _cacheResponses;
static public AbstractOperation reconstruct(Project project, JSONObject obj) throws Exception {
JSONObject engineConfig = obj.getJSONObject("engineConfig");
@ -91,7 +97,8 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
TextTransformOperation.stringToOnError(obj.getString("onError")),
obj.getString("newColumnName"),
obj.getInt("columnInsertIndex"),
obj.getInt("delay")
obj.getInt("delay"),
obj.optBoolean("cacheResponses", false) // false for retro-compatibility
);
}
@ -102,7 +109,8 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
OnError onError,
String newColumnName,
int columnInsertIndex,
int delay
int delay,
boolean cacheResponses
) {
super(engineConfig);
@ -114,6 +122,7 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
_columnInsertIndex = columnInsertIndex;
_delay = delay;
_cacheResponses = cacheResponses;
}
@Override
@ -130,6 +139,7 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
writer.key("urlExpression"); writer.value(_urlExpression);
writer.key("onError"); writer.value(TextTransformOperation.onErrorToString(_onError));
writer.key("delay"); writer.value(_delay);
writer.key("cacheResponses"); writer.value(_cacheResponses);
writer.endObject();
}
@ -160,7 +170,8 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
project,
engine,
eval,
getBriefDescription(null)
getBriefDescription(null),
_cacheResponses
);
}
@ -170,18 +181,45 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
final protected Evaluable _eval;
final protected long _historyEntryID;
protected int _cellIndex;
protected LoadingCache<String, Serializable> _urlCache;
public ColumnAdditionByFetchingURLsProcess(
Project project,
Engine engine,
Evaluable eval,
String description
String description,
boolean cacheResponses
) throws JSONException {
super(description);
_project = project;
_engine = engine;
_eval = eval;
_historyEntryID = HistoryEntry.allocateID();
_urlCache = null;
if (cacheResponses) {
_urlCache = CacheBuilder.newBuilder()
.maximumSize(2048)
.expireAfterWrite(10, TimeUnit.MINUTES)
.build(
new CacheLoader<String, Serializable>() {
public Serializable load(String urlString) {
Serializable result = fetch(urlString);
try {
// Always sleep for the delay, no matter how long the
// request took. This is more responsible than substracting
// the time spend requesting the URL, because it naturally
// slows us down if the server is busy and takes a long time
// to reply.
if (_delay > 0) {
Thread.sleep(_delay);
}
} catch (InterruptedException e) {
return null;
}
return result;
}
});
}
}
@Override
@ -222,27 +260,31 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
List<CellAtRow> responseBodies = new ArrayList<CellAtRow>(urls.size());
for (int i = 0; i < urls.size(); i++) {
CellAtRow urlData = urls.get(i);
long start = System.currentTimeMillis();
CellAtRow cellAtRow = fetch(urlData);
if (cellAtRow != null) {
String urlString = urlData.cell.value.toString();
Serializable response = null;
if (_urlCache != null) {
response = cachedFetch(urlString);
} else {
response = fetch(urlString);
}
if (response != null) {
CellAtRow cellAtRow = new CellAtRow(
urlData.row,
new Cell(response, null));
responseBodies.add(cellAtRow);
}
_progress = i * 100 / urls.size();
try {
long delay = _delay - (System.currentTimeMillis() - start);
if (delay > 0) {
Thread.sleep(delay);
}
} catch (InterruptedException e) {
if (_canceled) {
break;
}
}
}
if (!_canceled) {
HistoryEntry historyEntry = new HistoryEntry(
_historyEntryID,
_project,
@ -259,10 +301,16 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
}
}
CellAtRow fetch(CellAtRow urlData) {
String urlString = urlData.cell.value.toString();
URL url = null;
Serializable cachedFetch(String urlString) {
try {
return _urlCache.get(urlString);
} catch(ExecutionException e) {
return null;
}
}
Serializable fetch(String urlString) {
URL url = null;
try {
url = new URL(urlString);
} catch (MalformedURLException e) {
@ -287,12 +335,8 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
}
}
}
return new CellAtRow(
urlData.row,
new Cell(
ParsingUtilities.inputStreamToString(
is, (encoding == null) || ( encoding.equalsIgnoreCase("\"UTF-8\"")) ? "UTF-8" : encoding),
null));
return ParsingUtilities.inputStreamToString(
is, (encoding == null) || ( encoding.equalsIgnoreCase("\"UTF-8\"")) ? "UTF-8" : encoding);
} finally {
is.close();
@ -313,11 +357,11 @@ public class ColumnAdditionByFetchingURLsOperation extends EngineDependentOperat
message = e.toString();
}
return _onError == OnError.StoreError ?
new CellAtRow(urlData.row, new Cell(new EvalError(message), null)) : null;
new EvalError(message) : null;
}
} catch (Exception e) {
return _onError == OnError.StoreError ?
new CellAtRow(urlData.row, new Cell(new EvalError(e.getMessage()), null)) : null;
new EvalError(e.getMessage()) : null;
}
}

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@ -0,0 +1,164 @@
/*
Copyright 2010, Google Inc.
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are
met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above
copyright notice, this list of conditions and the following disclaimer
in the documentation and/or other materials provided with the
distribution.
* Neither the name of Google Inc. nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.tests.model;
import static org.mockito.Mockito.mock;
import java.io.File;
import java.io.IOException;
import java.util.Properties;
import org.json.JSONException;
import org.json.JSONObject;
import org.slf4j.LoggerFactory;
import org.testng.Assert;
import org.testng.annotations.AfterMethod;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Test;
import com.google.refine.ProjectManager;
import com.google.refine.ProjectMetadata;
import com.google.refine.browsing.Engine;
import com.google.refine.browsing.RowVisitor;
import com.google.refine.grel.Function;
import com.google.refine.io.FileProjectManager;
import com.google.refine.model.Cell;
import com.google.refine.model.Column;
import com.google.refine.model.ModelException;
import com.google.refine.model.Project;
import com.google.refine.model.Row;
import com.google.refine.process.Process;
import com.google.refine.process.ProcessManager;
import com.google.refine.operations.OnError;
import com.google.refine.operations.EngineDependentOperation;
import com.google.refine.operations.column.ColumnAdditionByFetchingURLsOperation;
import com.google.refine.tests.RefineTest;
import com.google.refine.tests.util.TestUtils;
public class UrlFetchingTests extends RefineTest {
static final String ENGINE_JSON_URLS = "{\"mode\":\"row-based\"}}";
@Override
@BeforeTest
public void init() {
logger = LoggerFactory.getLogger(this.getClass());
}
// dependencies
Project project;
Properties options;
JSONObject engine_config;
Engine engine;
Properties bindings;
@BeforeMethod
public void SetUp() throws JSONException, IOException, ModelException {
File dir = TestUtils.createTempDirectory("openrefine-test-workspace-dir");
FileProjectManager.initialize(dir);
project = new Project();
ProjectMetadata pm = new ProjectMetadata();
pm.setName("URL Fetching Test Project");
ProjectManager.singleton.registerProject(project, pm);
int index = project.columnModel.allocateNewCellIndex();
Column column = new Column(index,"fruits");
project.columnModel.addColumn(index, column, true);
options = mock(Properties.class);
engine = new Engine(project);
engine_config = new JSONObject(ENGINE_JSON_URLS);
engine.initializeFromJSON(engine_config);
engine.setMode(Engine.Mode.RowBased);
bindings = new Properties();
bindings.put("project", project);
}
@AfterMethod
public void TearDown() {
project = null;
options = null;
engine = null;
bindings = null;
}
/**
* Test for caching
*/
@Test
public void testUrlCaching() throws Exception {
for (int i = 0; i < 100; i++) {
Row row = new Row(2);
row.setCell(0, new Cell(i < 5 ? "apple":"orange", null));
project.rows.add(row);
}
EngineDependentOperation op = new ColumnAdditionByFetchingURLsOperation(engine_config,
"fruits",
"\"https://www.random.org/integers/?num=1&min=1&max=100&col=1&base=10&format=plain&rnd=new&city=\"+value",
OnError.SetToBlank,
"rand",
1,
500,
true);
ProcessManager pm = project.getProcessManager();
Process process = op.createProcess(project, options);
process.startPerforming(pm);
Assert.assertTrue(process.isRunning());
try {
// We have 100 rows and 500 ms per row but only two distinct
// values so we should not wait more than ~2000 ms to get the
// results. Just to make sure the test passes with plenty of
// net latency we sleep for longer (but still less than
// 50,000ms).
Thread.sleep(5000);
} catch (InterruptedException e) {
Assert.fail("Test interrupted");
}
Assert.assertFalse(process.isRunning());
// Inspect rows
String ref_val = (String)project.rows.get(0).getCellValue(1);
Assert.assertTrue(ref_val != "apple"); // just to make sure I picked the right column
for (int i = 1; i < 4; i++) {
// all random values should be equal due to caching
Assert.assertEquals(project.rows.get(i).getCellValue(1), ref_val);
}
}
}

View File

@ -500,6 +500,7 @@
"on-error": "On error",
"set-blank": "set to blank",
"store-err": "store error",
"cache-responses": "Cache responses",
"copy-val": "copy value from original column",
"warning-col-name": "You must enter a column name.",
"add-col-fetch": "Add column by fetching URLs based on column",

View File

@ -500,6 +500,7 @@
"on-error": "On error",
"set-blank": "set to blank",
"store-err": "store error",
"cache-responses": "Cache responses",
"copy-val": "copy value from original column",
"warning-col-name": "You must enter a column name.",
"add-col-fetch": "Add column by fetching URLs based on column",

View File

@ -500,6 +500,7 @@
"on-error": "En cas derreur",
"set-blank": "vider la cellule",
"store-err": "conserver lerreur",
"cache-responses": "Mettre les réponses en cache",
"copy-val": "copier la valeur depuis la colonne originale",
"warning-col-name": "Vous devez indiquer un nom de colonne.",
"add-col-fetch": "Ajouter une colonne en moissonnant les données depuis les URL dune colonne",

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@ -12,11 +12,14 @@
</tr>
<tr>
<td width="1%" style="white-space: pre;" bind="or_views_onErr"></td>
<td colspan="3">
<td>
<input type="radio" name="dialog-onerror-choice" value="set-to-blank" checked id="$add-column-error-set-to-blank"/>
<label for="$add-column-error-set-to-blank" bind="or_views_setBlank"></label>
<input type="radio" name="dialog-onerror-choice" value="store-error" id="$add-column-error-store-error" />
<label for="$add-column-error-store-error" bind="or_views_storeErr"></label></td>
<td colspan="2">
<input type="checkbox" name="dialog-cache-responses" id="$add-column-cache-responses" checked="checked" />
<label for="$add-column-cache-responses" bind="or_views_cacheResponses"></label></td>
</tr>
<tr><td colspan="4"><h3><span bind="or_views_urlFetch"></span></h3></td></tr>
<tr><td colspan="4">$EXPRESSION_PREVIEW_WIDGET$</td></tr>

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@ -103,6 +103,7 @@ DataTableColumnHeaderUI.extendMenu(function(column, columnHeaderUI, menu) {
elmts.or_views_onErr.text($.i18n._('core-views')["on-error"]);
elmts.or_views_setBlank.text($.i18n._('core-views')["set-blank"]);
elmts.or_views_storeErr.text($.i18n._('core-views')["store-err"]);
elmts.or_views_cacheResponses.text($.i18n._('core-views')["cache-responses"]);
elmts.or_views_urlFetch.text($.i18n._('core-views')["url-fetch"]);
elmts.okButton.html($.i18n._('core-buttons')["ok"]);
elmts.cancelButton.text($.i18n._('core-buttons')["cancel"]);
@ -135,7 +136,8 @@ DataTableColumnHeaderUI.extendMenu(function(column, columnHeaderUI, menu) {
newColumnName: columnName,
columnInsertIndex: columnIndex + 1,
delay: elmts.throttleDelayInput[0].value,
onError: $('input[name="dialog-onerror-choice"]:checked')[0].value
onError: $('input[name="dialog-onerror-choice"]:checked')[0].value,
cacheResponses: $('input[name="dialog-cache-responses"]')[0].checked,
},
null,
{ modelsChanged: true }