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Revert "OpenRefine Database Import Extension"

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Jacky 2018-01-13 14:36:23 -05:00 committed by GitHub
parent 851385588a
commit cc7a72d9db
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111 changed files with 0 additions and 14380 deletions
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12
.travis.yml
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@ -1,13 +1,6 @@
language: java
jdk:
- oraclejdk8
addons:
mariadb: '10.0'
services:
- mysql
- postgresql
env:
# encrypted Codacy key, see https://docs.travis-ci.com/user/encryption-keys/
@ -15,11 +8,6 @@ env:
before_install:
- wget -O ~/codacy-coverage-reporter-assembly-latest.jar https://github.com/codacy/codacy-coverage-reporter/releases/download/2.0.0/codacy-coverage-reporter-2.0.0-assembly.jar
# create test database for mysql, mariadb and postgresql
- mysql -u root -e 'CREATE DATABASE test_db;'
- mysql -u root test_db < extensions/database/test/conf/travis-mysql.sql
- psql -c 'CREATE DATABASE test_db;' -U postgres
- psql -U postgres test_db < extensions/database/test/conf/travis-pgsql.sql
script:
- ./refine server_test

3
extensions/build.xml
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@ -13,7 +13,6 @@
<ant dir="jython/" target="build" />
<ant dir="gdata/" target="build" />
<ant dir="pc-axis/" target="build" />
<ant dir="database/" target="build" />
</target>
<target name="clean">
@ -22,12 +21,10 @@
<ant dir="jython/" target="clean" />
<ant dir="gdata/" target="clean" />
<ant dir="pc-axis/" target="clean" />
<ant dir="database/" target="clean" />
</target>
<target name="test">
<echo message="Testing extensions" />
<ant dir="jython/" target="test" />
<ant dir="database/" target="test" />
</target>
</project>

23
extensions/database/.classpath
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@ -1,23 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<classpath>
<classpathentry kind="src" path="src"/>
<classpathentry kind="src" path="test"/>
<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
<classpathentry kind="con" path="org.testng.TESTNG_CONTAINER"/>
<classpathentry exported="true" kind="lib" path="module/MOD-INF/lib/mysql-connector-java-5.1.44-bin.jar"/>
<classpathentry kind="lib" path="module/MOD-INF/lib/json-simple-1.1.1.jar"/>
<classpathentry kind="lib" path="module/MOD-INF/lib/jackson-mapper-asl-1.9.13.jar"/>
<classpathentry kind="lib" path="module/MOD-INF/lib/postgresql-42.1.4.jar"/>
<classpathentry kind="lib" path="module/MOD-INF/lib/mariadb-java-client-2.2.0.jar"/>
<classpathentry kind="con" path="org.eclipse.jdt.junit.JUNIT_CONTAINER/4"/>
<classpathentry kind="lib" path="/OpenRefine/main/webapp/WEB-INF/lib/rhino-1.7R2.jar"/>
<classpathentry kind="lib" path="/OpenRefine/main/webapp/WEB-INF/lib/velocity-1.5.jar"/>
<classpathentry kind="lib" path="/OpenRefine/main/webapp/WEB-INF/lib/httpcore-4.2.4.jar"/>
<classpathentry kind="lib" path="/OpenRefine/main/webapp/WEB-INF/lib/commons-collections-3.2.1.jar"/>
<classpathentry kind="lib" path="module/MOD-INF/lib/jackson-core-asl-1.9.13.jar"/>
<classpathentry kind="lib" path="module/MOD-INF/lib/jasypt-1.9.2.jar"/>
<classpathentry kind="lib" path="/OpenRefine/main/webapp/WEB-INF/lib/commons-lang-2.5.jar" sourcepath="/OpenRefine/main/webapp/WEB-INF/lib-src/commons-lang-2.5-sources.jar"/>
<classpathentry kind="lib" path="/OpenRefine/main/tests/server/lib/mockito-all-1.9.5.jar"/>
<classpathentry combineaccessrules="false" kind="src" path="/OpenRefine"/>
<classpathentry kind="output" path="module/MOD-INF/classes"/>
</classpath>

4
extensions/database/.eclipse-pmd
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@ -1,4 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<eclipse-pmd xmlns="http://acanda.ch/eclipse-pmd/0.8" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance" xsi:schemaLocation="http://acanda.ch/eclipse-pmd/0.8 http://acanda.ch/eclipse-pmd/eclipse-pmd-0.8.xsd">
<analysis enabled="true" />
</eclipse-pmd>

28
extensions/database/.eslintrc.json
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@ -1,28 +0,0 @@
{
"env": {
"browser": true,
"es6": true
},
"extends": "eslint:recommended",
"parserOptions": {
"sourceType": "module"
},
"rules": {
"indent": [
"error",
4
],
"linebreak-style": [
"error",
"unix"
],
"quotes": [
"error",
"double"
],
"semi": [
"error",
"always"
]
}
}

35
extensions/database/.project
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@ -1,35 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<projectDescription>
<name>refine-database-extension</name>
<comment></comment>
<projects>
</projects>
<buildSpec>
<buildCommand>
<name>org.eclipse.wst.jsdt.core.javascriptValidator</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.wst.common.project.facet.core.builder</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>org.eclipse.jdt.core.javabuilder</name>
<arguments>
</arguments>
</buildCommand>
<buildCommand>
<name>ch.acanda.eclipse.pmd.builder.PMDBuilder</name>
<arguments>
</arguments>
</buildCommand>
</buildSpec>
<natures>
<nature>org.eclipse.jdt.core.javanature</nature>
<nature>org.eclipse.wst.common.project.facet.core.nature</nature>
<nature>org.eclipse.wst.jsdt.core.jsNature</nature>
<nature>ch.acanda.eclipse.pmd.builder.PMDNature</nature>
</natures>
</projectDescription>

12
extensions/database/.settings/.jsdtscope
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@ -1,12 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<classpath>
<classpathentry kind="src" path=""/>
<classpathentry kind="con" path="org.eclipse.wst.jsdt.launching.JRE_CONTAINER"/>
<classpathentry kind="con" path="org.eclipse.wst.jsdt.launching.WebProject">
<attributes>
<attribute name="hide" value="true"/>
</attributes>
</classpathentry>
<classpathentry kind="con" path="org.eclipse.wst.jsdt.launching.baseBrowserLibrary"/>
<classpathentry kind="output" path=""/>
</classpath>

280
extensions/database/.settings/org.eclipse.jdt.core.prefs
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@ -1,280 +0,0 @@
eclipse.preferences.version=1
org.eclipse.jdt.core.compiler.codegen.inlineJsrBytecode=enabled
org.eclipse.jdt.core.compiler.codegen.methodParameters=do not generate
org.eclipse.jdt.core.compiler.codegen.targetPlatform=1.6
org.eclipse.jdt.core.compiler.codegen.unusedLocal=preserve
org.eclipse.jdt.core.compiler.compliance=1.6
org.eclipse.jdt.core.compiler.debug.lineNumber=generate
org.eclipse.jdt.core.compiler.debug.localVariable=generate
org.eclipse.jdt.core.compiler.debug.sourceFile=generate
org.eclipse.jdt.core.compiler.problem.assertIdentifier=error
org.eclipse.jdt.core.compiler.problem.enumIdentifier=error
org.eclipse.jdt.core.compiler.source=1.6
org.eclipse.jdt.core.formatter.align_type_members_on_columns=false
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_allocation_expression=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_annotation=0
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_enum_constant=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_explicit_constructor_call=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_method_invocation=16
org.eclipse.jdt.core.formatter.alignment_for_arguments_in_qualified_allocation_expression=16
org.eclipse.jdt.core.formatter.alignment_for_assignment=0
org.eclipse.jdt.core.formatter.alignment_for_binary_expression=16
org.eclipse.jdt.core.formatter.alignment_for_compact_if=16
org.eclipse.jdt.core.formatter.alignment_for_conditional_expression=80
org.eclipse.jdt.core.formatter.alignment_for_enum_constants=0
org.eclipse.jdt.core.formatter.alignment_for_expressions_in_array_initializer=16
org.eclipse.jdt.core.formatter.alignment_for_method_declaration=0
org.eclipse.jdt.core.formatter.alignment_for_multiple_fields=16
org.eclipse.jdt.core.formatter.alignment_for_parameters_in_constructor_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_parameters_in_method_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_selector_in_method_invocation=16
org.eclipse.jdt.core.formatter.alignment_for_superclass_in_type_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_enum_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_superinterfaces_in_type_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_throws_clause_in_constructor_declaration=16
org.eclipse.jdt.core.formatter.alignment_for_throws_clause_in_method_declaration=33
org.eclipse.jdt.core.formatter.blank_lines_after_imports=1
org.eclipse.jdt.core.formatter.blank_lines_after_package=1
org.eclipse.jdt.core.formatter.blank_lines_before_field=0
org.eclipse.jdt.core.formatter.blank_lines_before_first_class_body_declaration=1
org.eclipse.jdt.core.formatter.blank_lines_before_imports=1
org.eclipse.jdt.core.formatter.blank_lines_before_member_type=1
org.eclipse.jdt.core.formatter.blank_lines_before_method=1
org.eclipse.jdt.core.formatter.blank_lines_before_new_chunk=1
org.eclipse.jdt.core.formatter.blank_lines_before_package=1
org.eclipse.jdt.core.formatter.blank_lines_between_import_groups=1
org.eclipse.jdt.core.formatter.blank_lines_between_type_declarations=1
org.eclipse.jdt.core.formatter.brace_position_for_annotation_type_declaration=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_anonymous_type_declaration=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_array_initializer=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_block=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_block_in_case=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_constructor_declaration=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_enum_constant=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_enum_declaration=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_method_declaration=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_switch=end_of_line
org.eclipse.jdt.core.formatter.brace_position_for_type_declaration=end_of_line
org.eclipse.jdt.core.formatter.comment.clear_blank_lines_in_block_comment=false
org.eclipse.jdt.core.formatter.comment.clear_blank_lines_in_javadoc_comment=false
org.eclipse.jdt.core.formatter.comment.format_block_comments=true
org.eclipse.jdt.core.formatter.comment.format_header=false
org.eclipse.jdt.core.formatter.comment.format_html=true
org.eclipse.jdt.core.formatter.comment.format_javadoc_comments=true
org.eclipse.jdt.core.formatter.comment.format_line_comments=true
org.eclipse.jdt.core.formatter.comment.format_source_code=true
org.eclipse.jdt.core.formatter.comment.indent_parameter_description=true
org.eclipse.jdt.core.formatter.comment.indent_root_tags=true
org.eclipse.jdt.core.formatter.comment.insert_new_line_before_root_tags=insert
org.eclipse.jdt.core.formatter.comment.insert_new_line_for_parameter=insert
org.eclipse.jdt.core.formatter.comment.line_length=80
org.eclipse.jdt.core.formatter.comment.new_lines_at_block_boundaries=true
org.eclipse.jdt.core.formatter.comment.new_lines_at_javadoc_boundaries=true
org.eclipse.jdt.core.formatter.compact_else_if=true
org.eclipse.jdt.core.formatter.continuation_indentation=2
org.eclipse.jdt.core.formatter.continuation_indentation_for_array_initializer=2
org.eclipse.jdt.core.formatter.disabling_tag=@formatter\:off
org.eclipse.jdt.core.formatter.enabling_tag=@formatter\:on
org.eclipse.jdt.core.formatter.format_guardian_clause_on_one_line=false
org.eclipse.jdt.core.formatter.format_line_comment_starting_on_first_column=true
org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_annotation_declaration_header=true
org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_enum_constant_header=true
org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_enum_declaration_header=true
org.eclipse.jdt.core.formatter.indent_body_declarations_compare_to_type_header=true
org.eclipse.jdt.core.formatter.indent_breaks_compare_to_cases=true
org.eclipse.jdt.core.formatter.indent_empty_lines=false
org.eclipse.jdt.core.formatter.indent_statements_compare_to_block=true
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org.eclipse.jdt.core.formatter.indentation.size=8
org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_local_variable=insert
org.eclipse.jdt.core.formatter.insert_new_line_after_annotation_on_member=insert
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org.eclipse.jdt.core.formatter.insert_new_line_after_opening_brace_in_array_initializer=do not insert
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org.eclipse.jdt.core.formatter.insert_space_before_comma_in_for_increments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_for_inits=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_method_declaration_parameters=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_method_declaration_throws=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_method_invocation_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_multiple_field_declarations=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_multiple_local_declarations=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_parameterized_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_superinterfaces=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_comma_in_type_parameters=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_ellipsis=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_parameterized_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_type_arguments=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_angle_bracket_in_type_parameters=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_annotation_type_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_anonymous_type_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_array_initializer=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_block=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_constructor_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_enum_constant=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_enum_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_method_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_switch=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_brace_in_type_declaration=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_bracket_in_array_allocation_expression=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_bracket_in_array_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_bracket_in_array_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_annotation=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_annotation_type_member_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_catch=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_constructor_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_enum_constant=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_for=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_if=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_method_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_method_invocation=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_parenthesized_expression=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_switch=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_synchronized=insert
org.eclipse.jdt.core.formatter.insert_space_before_opening_paren_in_while=insert
org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_return=insert
org.eclipse.jdt.core.formatter.insert_space_before_parenthesized_expression_in_throw=insert
org.eclipse.jdt.core.formatter.insert_space_before_postfix_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_prefix_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_question_in_conditional=insert
org.eclipse.jdt.core.formatter.insert_space_before_question_in_wildcard=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_semicolon=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_semicolon_in_for=do not insert
org.eclipse.jdt.core.formatter.insert_space_before_unary_operator=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_brackets_in_array_type_reference=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_braces_in_array_initializer=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_brackets_in_array_allocation_expression=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_annotation_type_member_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_constructor_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_enum_constant=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_declaration=do not insert
org.eclipse.jdt.core.formatter.insert_space_between_empty_parens_in_method_invocation=do not insert
org.eclipse.jdt.core.formatter.join_lines_in_comments=true
org.eclipse.jdt.core.formatter.join_wrapped_lines=true
org.eclipse.jdt.core.formatter.keep_else_statement_on_same_line=false
org.eclipse.jdt.core.formatter.keep_empty_array_initializer_on_one_line=false
org.eclipse.jdt.core.formatter.keep_imple_if_on_one_line=true
org.eclipse.jdt.core.formatter.keep_then_statement_on_same_line=false
org.eclipse.jdt.core.formatter.lineSplit=120
org.eclipse.jdt.core.formatter.never_indent_block_comments_on_first_column=false
org.eclipse.jdt.core.formatter.never_indent_line_comments_on_first_column=false
org.eclipse.jdt.core.formatter.number_of_blank_lines_at_beginning_of_method_body=0
org.eclipse.jdt.core.formatter.number_of_empty_lines_to_preserve=1
org.eclipse.jdt.core.formatter.put_empty_statement_on_new_line=true
org.eclipse.jdt.core.formatter.tabulation.char=space
org.eclipse.jdt.core.formatter.tabulation.size=4
org.eclipse.jdt.core.formatter.use_on_off_tags=true
org.eclipse.jdt.core.formatter.use_tabs_only_for_leading_indentations=false
org.eclipse.jdt.core.formatter.wrap_before_binary_operator=true
org.eclipse.jdt.core.formatter.wrap_outer_expressions_when_nested=true

4
extensions/database/.settings/org.eclipse.jdt.ui.prefs
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@ -1,4 +0,0 @@
#Mon Sep 27 15:02:46 PDT 2010
eclipse.preferences.version=1
formatter_profile=_Google Refine
formatter_settings_version=11

6
extensions/database/.settings/org.eclipse.wst.common.project.facet.core.xml
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@ -1,6 +0,0 @@
<?xml version="1.0" encoding="UTF-8"?>
<faceted-project>
<fixed facet="wst.jsdt.web"/>
<installed facet="java" version="1.6"/>
<installed facet="wst.jsdt.web" version="1.0"/>
</faceted-project>

1
extensions/database/.settings/org.eclipse.wst.jsdt.ui.superType.container
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@ -1 +0,0 @@
org.eclipse.wst.jsdt.launching.baseBrowserLibrary

1
extensions/database/.settings/org.eclipse.wst.jsdt.ui.superType.name
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@ -1 +0,0 @@
Window

41
extensions/database/README.md
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@ -1,41 +0,0 @@
This project is an extension for OpenRefine that provides a way to import database data using JDBC.
INSTALL
1. Before installing this extension download OpenRefine code from http://code.google.com/p/google-refine/source/checkout.
2. Pull this extension's code into folder database under folder /extensions.
For more information on how to write a OpenRefine extensions and where to put the files see http://code.google.com/p/google-refine/wiki/WriteAnExtension
The folder structure should resemble this:
grefine-all/
----------/extensions
--------------/database
------------------/module
------------------/src
------------------build.xml
------------------README (this file)
3. Update build.xml in folder /extensions with build and clean ant tasks for database:
<project name="google-refine-extensions" default="build" basedir=".">
<target name="build">
<echo message="Building extensions" />
<ant dir="sample/" target="build" />
<ant dir="jython/" target="build" />
<ant dir="gdata/" target="build" />
<ant dir="database/" target="build" />
</target>
<target name="clean">
<echo message="cleaning extensions" />
<ant dir="sample/" target="clean" />
<ant dir="jython/" target="clean" />
<ant dir="freebase/" target="clean" />
<ant dir="gdata/" target="clean" />
<ant dir="database/" target="clean" />
</target>
</project>
4. If using Eclipse, make sure that you build project with ant

193
extensions/database/build.xml
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<?xml version="1.0" encoding="UTF-8"?>
<!--+
|
| OpenRefine Database Extension Build File
|
+-->
<project name="refine-database-extension" default="build" basedir="." xmlns:jacoco="antlib:org.jacoco.ant">
<property environment="env"/>
<condition property="version" value="trunk">
<not><isset property="version"/></not>
</condition>
<condition property="revision" value="rXXXX">
<not><isset property="revision"/></not>
</condition>
<condition property="full_version" value="0.0.0.0">
<not><isset property="full_version"/></not>
</condition>
<condition property="dist.dir" value="dist">
<not><isset property="dist.dir"/></not>
</condition>
<property name="fullname" value="${name}-${version}-${revision}" />
<property name="java_version" value="1.8"/>
<property name="refine.dir" value="${basedir}/../../main" />
<property name="refine.webinf.dir" value="${refine.dir}/webapp/WEB-INF" />
<property name="refine.modinf.dir" value="${refine.dir}/webapp/modules/core/MOD-INF" />
<property name="refine.classes.dir" value="${refine.webinf.dir}/classes" />
<property name="refine.lib.dir" value="${refine.webinf.dir}/lib" />
<property name="refine.tests.lib.dir" value="${refine.dir}/tests/server/lib" />
<property name="src.dir" value="${basedir}/src" />
<property name="module.dir" value="${basedir}/module" />
<property name="modinf.dir" value="${module.dir}/MOD-INF" />
<property name="lib.dir" value="${modinf.dir}/lib" />
<property name="classes.dir" value="${modinf.dir}/classes" />
<property name="test.dir" value="${basedir}/test" />
<property name="test.src.dir" value="${test.dir}"/>
<property name="test.out.dir" value="${basedir}/test-out" />
<property name="test.build.dir" value="${test.out.dir}/build" />
<property name="test.classes.dir" value="${test.out.dir}/classes" />
<property name="test.report.dir" value="${test.out.dir}/report"/>
<property name="test.report.html.dir" value="${test.report.dir}/html"/>
<property name="test.report.xml.path" value="${test.report.dir}/jacoco.xml"/>
<path id="class.path">
<fileset dir="${lib.dir}">
<include name="**/*.jar" />
</fileset>
<fileset dir="${refine.lib.dir}">
<include name="**/*.jar" />
</fileset>
<fileset dir="${server.lib.dir}">
<include name="**/*.jar" />
</fileset>
<pathelement path="${refine.classes.dir}"/>
<pathelement path="${classes.dir}"/>
</path>
<path id="extension.tests.class.path">
<path refid="class.path"/>
<pathelement location="${test.classes.dir}"/>
<pathelement location="${refine.tests.lib.dir}/testng-6.8.jar"/>
<fileset dir="${refine.tests.lib.dir}">
<include name="**/*.jar" />
</fileset>
</path>
<taskdef resource="testngtasks" classpath="${refine.tests.lib.dir}/testng-6.8.jar"/>
<taskdef uri="antlib:org.jacoco.ant" resource="org/jacoco/ant/antlib.xml">
<classpath path="${refine.tests.lib.dir}/jacocoant.jar"/>
</taskdef>
<target name="build_java">
<mkdir dir="${classes.dir}" />
<javac source="${java_version}" target="${java_version}" encoding="utf-8" destdir="${classes.dir}" debug="true" includeAntRuntime="no">
<src path="${src.dir}"/>
<classpath refid="class.path" />
</javac>
</target>
<target name="build" depends="build_java"/>
<target name="build_tests" depends="clean, build">
<mkdir dir="${test.classes.dir}" />
<javac source="${java_version}" target="${java_version}" encoding="utf-8" srcdir="${test.src.dir}" destdir="${test.classes.dir}" debug="true" includeAntRuntime="no">
<classpath refid="extension.tests.class.path" />
</javac>
<copy file="${test.src.dir}/log4j-test.properties" tofile="${test.classes.dir}/log4j-test.properties"/>
</target>
<mkdir dir="${test.build.dir}" />
<target name="test" depends="build_tests">
<jacoco:coverage destfile="${test.report.dir}/jacoco.exec">
<testng verbose="2" haltOnFailure="true" workingdir="${test.build.dir}"
listener="org.testng.reporters.DotTestListener" excludedgroups="broken"
classpathref="extension.tests.class.path">
<xmlfileset file="${test.src.dir}/conf/int_tests.xml"/>
</testng>
</jacoco:coverage>
<jacoco:report>
<executiondata>
<file file="${test.report.dir}/jacoco.exec"/>
</executiondata>
<structure name="Database extension">
<classfiles>
<fileset dir="${classes.dir}"/>
</classfiles>
<sourcefiles encoding="UTF-8">
<fileset dir="${src.dir}"/>
</sourcefiles>
</structure>
<html destdir="${test.report.html.dir}"/>
<xml destfile="${test.report.xml.path}"/>
</jacoco:report>
</target>
<target name="unit_test" depends="build_tests">
<jacoco:coverage destfile="${test.report.dir}/jacoco.exec">
<testng verbose="2" haltOnFailure="true" workingdir="${test.build.dir}"
listener="org.testng.reporters.DotTestListener" excludedgroups="broken"
classpathref="extension.tests.class.path">
<xmlfileset file="${test.src.dir}/conf/unit_tests.xml"/>
</testng>
</jacoco:coverage>
<jacoco:report>
<executiondata>
<file file="${test.report.dir}/jacoco.exec"/>
</executiondata>
<structure name="Database extension">
<classfiles>
<fileset dir="${classes.dir}"/>
</classfiles>
<sourcefiles encoding="UTF-8">
<fileset dir="${src.dir}"/>
</sourcefiles>
</structure>
<html destdir="${test.report.html.dir}"/>
<xml destfile="${test.report.xml.path}"/>
</jacoco:report>
</target>
<target name="dist" depends="build">
<mkdir dir="${ext.dir}"/>
<copy todir="${ext.dir}/module">
<fileset dir="module">
<include name="**/*"/>
<exclude name="**/lib-src/*"/>
<exclude name="**/src/*"/>
</fileset>
</copy>
<copy todir="${ext.dir}/licenses">
<fileset dir="${basedir}/licenses">
<include name="**"/>
</fileset>
</copy>
<copy file="${basedir}/LICENSE.txt" tofile="${ext.dir}/LICENSE.txt"/>
<copy file="${basedir}/README.txt" tofile="${ext.dir}/README.txt"/>
<zip destfile="${dist.dir}/openrefine-${fullname}.zip">
<zipfileset dir="${ext.dir}/..">
<include name="**/**"/>
</zipfileset>
</zip>
<delete dir="${ext.dir}"/>
</target>
<target name="clean">
<delete dir="${classes.dir}" />
<delete dir="${test.out.dir}" />
</target>
<target name="distclean">
<delete dir="${dist.dir}" />
</target>
</project>

188
extensions/database/licenses/jdbc-client.LICENSE.txt
View File

@ -1,188 +0,0 @@
Copyright 2006 Google
Licensed under the Apache License, Version 2.0 (the "License");
you may not use this file except in compliance with the License.
You may obtain a copy of the License at
http://www.apache.org/licenses/LICENSE-2.0
Unless required by applicable law or agreed to in writing, software
distributed under the License is distributed on an "AS IS" BASIS,
WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
See the License for the specific language governing permissions and
limitations under the License.
Apache License
Version 2.0, January 2004
http://www.apache.org/licenses/
TERMS AND CONDITIONS FOR USE, REPRODUCTION, AND DISTRIBUTION
1. Definitions.
"License" shall mean the terms and conditions for use, reproduction,
and distribution as defined by Sections 1 through 9 of this document.
"Licensor" shall mean the copyright owner or entity authorized by
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other entities that control, are controlled by, or are under common
control with that entity. For the purposes of this definition,
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direction or management of such entity, whether by contract or
otherwise, or (ii) ownership of fifty percent (50%) or more of the
outstanding shares, or (iii) beneficial ownership of such entity.
"You" (or "Your") shall mean an individual or Legal Entity
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"Source" form shall mean the preferred form for making modifications,
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8. Limitation of Liability. In no event and under no legal theory,
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unless required by applicable law (such as deliberate and grossly
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1
extensions/database/module/MOD-INF/.gitignore vendored
View File

@ -1 +0,0 @@
/classes/

149
extensions/database/module/MOD-INF/controller.js
View File

@ -1,149 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
/*
* Controller for JDBC Database extension.
*
* This is run in the Butterfly (ie Refine) server context using the Rhino
* Javascript interpreter.
*/
var html = "text/html";
var encoding = "UTF-8";
var version = "0.1";
var ClientSideResourceManager = Packages.com.google.refine.ClientSideResourceManager;
var logger = Packages.org.slf4j.LoggerFactory.getLogger("database-extension"),
File = Packages.java.io.File,
refineServlet = Packages.com.google.refine.RefineServlet;
/*
* Register our custom commands.
*/
function registerCommands() {
logger.info("Registering Database Extension Commands......");
var RS = Packages.com.google.refine.RefineServlet;
RS.registerCommand(module, "test-connect", Packages.com.google.refine.extension.database.cmd.TestConnectCommand());
RS.registerCommand(module, "connect", Packages.com.google.refine.extension.database.cmd.ConnectCommand());
RS.registerCommand(module, "saved-connection", Packages.com.google.refine.extension.database.cmd.SavedConnectionCommand());
RS.registerCommand(module, "execute-query", Packages.com.google.refine.extension.database.cmd.ExecuteQueryCommand());
RS.registerCommand(module, "test-query", Packages.com.google.refine.extension.database.cmd.TestQueryCommand());
logger.info("Database Extension Command Registeration done!!");
}
function registerOperations() {
logger.info("Database Operations Registered successfully...");
}
function registerFunctions() {
logger.info("Database Functions Registered successfully...");
}
/*
* Function invoked to initialize the extension.
*/
function init() {
logger.info("Initializing OpenRefine Database...");
logger.info("Database Extension Mount point " + module.getMountPoint());
registerCommands();
registerOperations();
registerFunctions();
// Register importer and exporter
var IM = Packages.com.google.refine.importing.ImportingManager;
IM.registerController(
module,
"database-import-controller",
new Packages.com.google.refine.extension.database.DatabaseImportController()
);
// Script files to inject into /index page
ClientSideResourceManager.addPaths(
"index/scripts",
module,
[
"scripts/index/jquery.contextMenu.min.js",
"scripts/index/jquery.ui.position.min.js",
"scripts/database-extension.js",
"scripts/index/database-import-controller.js",
"scripts/index/database-source-ui.js"
]
);
// Style files to inject into /index page
ClientSideResourceManager.addPaths(
"index/styles",
module,
[
"styles/jquery.contextMenu.css",
"styles/pure.css",
"styles/bootstrap.css",
"styles/database-import.less"
]
);
// Script files to inject into /project page
ClientSideResourceManager.addPaths(
"project/scripts",
module,
[
"scripts/database-extension.js",
"scripts/project/database-exporters.js"
]
);
}
/*
* Function invoked to handle each request in a custom way.
*/
function process(path, request, response) {
var method = request.getMethod();
logger.info('receiving request for ' + path);
logger.info('receiving method for ' + method);
if (path == "/" || path == "") {
var context = {};
context.version = version;
send(request, response, "index.vt", context);
}
}
function send(request, response, template, context) {
butterfly.sendTextFromTemplate(request, response, context, template, encoding, html);
}

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# Batch size for import data
preview.batchSize = 100
create.batchSize = 1000

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extensions/database/module/MOD-INF/module.properties
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name = database
description = Database importer/exporter for OpenRefine
templating.macros = macros.vm
requires = core
# Use our custom class for a module implementation.
module-impl = com.google.refine.extension.database.DatabaseModuleImpl

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20
extensions/database/module/index.vt
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#*
* Access this page at the URL /extension/database/
*#
<html>
<head>
<title>OpenRefine Database Extension v$version</title>
</head>
<body>
<h1>OpenRefine DATABASE Extension v$version</h1>
<h2>by Tony Opara <tcbuzor@gmail.com></h2>
<p>The JDBC extension allows OpenRefine to read
(and write, soon) data from JDBC compatible databases(MySQL, PostgreSQL, MariaDB).
</p>
<h3>Known Limitations</h3>
<ul>
<li>No write support</li>
</ul>
</body>
</html>

58
extensions/database/module/langs/translation-en.json
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{
"database-import": {
"title": "Database Servers",
"preparing": "Preparing Result ...",
"checking": "Validating Query ...",
"creating": "Creating project ..."
},
"database-source": {
"alert-host": "You must specify a Database Host",
"alert-port": "You must specify a Database Port",
"alert-user": "You must specify a Database User",
"alert-password": "You must specify a Database Password",
"alert-connection-name": "You must specify a Connection Name",
"alert-initial-database": "You must specify an Initial Database",
"alert-query": "You must specify a valid Query",
"alert-invalid-query-keyword": "Query cannot contain Data Manipulation keyword:",
"alert-invalid-query-select": "Query must start with SELECT Keyword",
"form-validation-failure" : "New Connection From is Invalid!",
"alert-connection-edit": "Connection edited successfully",
"connectionNameLabel": "Name:",
"databaseTypeLabel": "Type:",
"databaseHostLabel": "Host:",
"databasePortLabel": "Port:",
"databaseUserLabel": "User:",
"databasePasswordLabel": "Password:",
"databaseNameLabel": "Database:",
"databaseSchemaLabel": "Schema:",
"databaseTestButton": "Test",
"databaseSaveButton": "Save",
"databaseConnectButton": "Connect",
"newConnectionButtonDiv": "New Connection",
"savedConnectionSpan": "Saved Connections"
},
"database-parsing": {
"start-over": "&laquo; Start Over",
"conf-pars": "Configure Parsing Options",
"proj-name": "Project&nbsp;name",
"create-proj": "Create Project &raquo;",
"updating-preview": "Updating preview ...",
"worksheet": "Worksheets",
"option": "Options",
"preview-button": "Update&nbsp;Preview",
"ignore-first": "Ignore first",
"ignore": "line(s) at beginning of file",
"parse-next": "Parse next",
"parse": "line(s) as column headers",
"discard-next": "Discard initial",
"discard": "row(s) of data",
"limit-next": "Load at most",
"limit": "row(s) of data",
"store-row": "Store blank rows",
"store-cell": "Store blank cells as nulls"
}
}

3
extensions/database/module/langs/translation-fr.json
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{
}

3
extensions/database/module/langs/translation-he.json
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{
}

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extensions/database/module/langs/translation-it.json
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{
}

14
extensions/database/module/macros.vm
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#*
This file contains common velocity macros used in all .vt files.
For Velocity documentation, see:
http://velocity.apache.org/engine/releases/velocity-1.5/user-guide.html
*#
#macro( makeAList $list )
<ul>
#foreach($item in $list)
<li>$item</li>
#end
</ul>
#end

197
extensions/database/module/scripts/database-extension.js
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
$(function(){
$.contextMenu({
selector: '.context-menu-one',
trigger: 'left',
build: function($trigger, e) {
return {
callback: function(key, options) {
var m = "clicked: " + key;
DatabaseExtension.handleSavedConnectionClicked(key, $(this).text());
},
items: {
"edit": {name: " Edit "},
"sep0": "",
"delete": {name: " Delete "},
"sep1": "---------",
"connect": {name: " Connect "},
"dummy": {name: "", icon: ""}
}
};
}
});
});
var DatabaseExtension = {};
DatabaseExtension.currentConnection = {};
DatabaseExtension.handleSavedConnectionClicked = function(menuKey, connectionName) {
var jdbcConnectionInfo = {};
jdbcConnectionInfo.connectionName = connectionName;
if(menuKey === "edit"){
DatabaseExtension.handleEditConnectionClicked(connectionName);
}else if(menuKey === "delete"){
DatabaseExtension.handleDeleteConnectionClicked(connectionName);
}else if(menuKey === "connect"){
DatabaseExtension.handleConnectClicked(connectionName);
}
};
DatabaseExtension.handleConnectClicked = function(connectionName) {
$.get(
"command/database/saved-connection" + '?' + $.param({"connectionName": connectionName}),
null,
function(savedDatabaseConfig) {
if(savedDatabaseConfig){
var savedConfig = savedDatabaseConfig.savedConnections[0];
var databaseConfig = {};
databaseConfig.connectionName = savedConfig.connectionName;
databaseConfig.databaseType = savedConfig.databaseType;
databaseConfig.databaseServer = savedConfig.databaseHost;
databaseConfig.databasePort = savedConfig.databasePort;
databaseConfig.databaseUser = savedConfig.databaseUser;
databaseConfig.databasePassword = savedConfig.databasePassword;
databaseConfig.initialDatabase = savedConfig.databaseName;
databaseConfig.initialSchema = savedConfig.databaseSchema;
$.post(
"command/database/connect",
databaseConfig,
function(databaseInfo) {
if(databaseInfo){
DatabaseExtension.currentConnection.databaseInfo;
$( "#currentConnectionNameInput" ).val(databaseConfig.connectionName);
$( "#currentDatabaseTypeInput" ).val(databaseConfig.databaseType);
$( "#currentDatabaseUserInput" ).val(databaseConfig.databaseUser);
$( "#currentDatabasePasswordInput" ).val(databaseConfig.databasePassword);
$( "#currentDatabaseHostInput" ).val(databaseConfig.databaseServer);
$( "#currentDatabasePortInput" ).val(databaseConfig.databasePort);
$( "#currentInitialDatabaseInput" ).val(databaseConfig.initialDatabase);
var connectionParam = "Connection[" + databaseConfig.connectionName + "] :: "
+ "jdbc:"
+ databaseConfig.databaseType + "://"
+ databaseConfig.databaseServer + ":"
+ databaseConfig.databasePort + "/"
+ databaseConfig.initialDatabase;
$( "#connectionParameterSpan" ).text(connectionParam);
$( "#newConnectionDiv" ).hide();
$( "#sqlEditorDiv" ).show();
}else{
window.alert("Unable to establish connection to database");
}
},
"json"
).fail(function( jqXhr, textStatus, errorThrown ){
alert( textStatus + ':' + errorThrown );
});
}
},
"json"
);
};
DatabaseExtension.handleDeleteConnectionClicked = function(connectionName) {
$.ajax({
url: 'command/database/saved-connection' + '?' + $.param({"connectionName": connectionName}),
type: 'DELETE',
contentType:'application/json',
data: null,
success: function(settings) {
if(settings){
$( "#menuListUl" ).empty();
var items = [];
$.each(settings.savedConnections,function(index,savedConnection){
items.push('<li class="pure-menu-item sc-list"><a href="#" class="pure-menu-link context-menu-one">'
+ '<span class="context-menu-text" >' + savedConnection.connectionName + '</span>'
+ '<span class="sc-context-more-vert pull-right"> </span></a></li>');
})
$( "#menuListUl" ).append(items.join(''));
}
}
}).fail(function( jqXhr, textStatus, errorThrown ){
alert( textStatus + ':' + errorThrown );
});
}
DatabaseExtension.handleEditConnectionClicked = function(connectionName) {
$.get(
"command/database/saved-connection" + '?' + $.param({"connectionName": connectionName}),
null,
function(savedDatabaseConfig) {
if(savedDatabaseConfig){
var savedConfig = savedDatabaseConfig.savedConnections[0];
$( "#connectionName" ).val(savedConfig.connectionName);
$( "#databaseTypeSelect" ).val(savedConfig.databaseType);
$( "#databaseHost" ).val(savedConfig.databaseHost);
$( "#databasePort" ).val(savedConfig.databasePort);
$( "#databaseUser" ).val(savedConfig.databaseUser);
$( "#databasePassword" ).val(savedConfig.databasePassword);
$( "#initialDatabase" ).val(savedConfig.databaseName);
$( "#initialSchema" ).val(savedConfig.databaseSchema);
$( "#newConnectionControlDiv" ).hide();
$( "#editConnectionControlDiv" ).show();
$( "#newConnectionDiv" ).show();
$('#sqlEditorDiv').hide();
$("#connectionName").attr('readonly', 'readonly');
}
},
"json"
);
}

378
extensions/database/module/scripts/index/database-import-controller.js
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@ -1,378 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
//Internationalization init
var lang = navigator.language.split("-")[0]
|| navigator.userLanguage.split("-")[0];
var dictionary = "";
$.ajax({
url : "command/core/load-language?",
type : "POST",
async : false,
data : {
module : "database",
},
success : function(data) {
dictionary = data;
}
});
$.i18n.setDictionary(dictionary);
// End internationalization
Refine.DatabaseImportController = function(createProjectUI) {
this._createProjectUI = createProjectUI;
this._parsingPanel = createProjectUI.addCustomPanel();
createProjectUI.addSourceSelectionUI({
label: "Database",
id: "database-source",
ui: new Refine.DatabaseSourceUI(this)
});
};
Refine.CreateProjectUI.controllers.push(Refine.DatabaseImportController);
Refine.DatabaseImportController.prototype.startImportingDocument = function(queryInfo) {
var dismiss = DialogSystem.showBusy($.i18n._('database-import')["preparing"]);
//alert(queryInfo.query);
var self = this;
$.post(
"command/core/create-importing-job",
null,
function(data) {
$.post(
"command/core/importing-controller?" + $.param({
"controller": "database/database-import-controller",
"subCommand": "initialize-parser-ui"
}),
queryInfo,
function(data2) {
dismiss();
if (data2.status == 'ok') {
self._queryInfo = queryInfo;
self._jobID = data.jobID;
self._options = data2.options;
self._showParsingPanel();
} else {
alert(data2.message);
}
},
"json"
);
},
"json"
);
};
Refine.DatabaseImportController.prototype.getOptions = function() {
var options = {
};
var parseIntDefault = function(s, def) {
try {
var n = parseInt(s);
if (!isNaN(n)) {
return n;
}
} catch (e) {
// Ignore
}
return def;
};
if (this._parsingPanelElmts.skipCheckbox[0].checked) {
options.skipDataLines = parseIntDefault(this._parsingPanelElmts.skipInput[0].value, 0);
} else {
options.skipDataLines = 0;
}
if (this._parsingPanelElmts.limitCheckbox[0].checked) {
options.limit = parseIntDefault(this._parsingPanelElmts.limitInput[0].value, -1);
} else {
options.limit = -1;
}
options.storeBlankRows = this._parsingPanelElmts.storeBlankRowsCheckbox[0].checked;
options.storeBlankCellsAsNulls = this._parsingPanelElmts.storeBlankCellsAsNullsCheckbox[0].checked;
return options;
};
Refine.DatabaseImportController.prototype._showParsingPanel = function() {
var self = this;
this._parsingPanel.unbind().empty().html(
DOM.loadHTML("database",'scripts/index/database-parsing-panel.html'));
this._parsingPanelElmts = DOM.bind(this._parsingPanel);
this._parsingPanelElmts.startOverButton.html($.i18n._('database-parsing')["start-over"]);
this._parsingPanelElmts.database_conf_pars.html($.i18n._('database-parsing')["conf-pars"]);
this._parsingPanelElmts.database_proj_name.html($.i18n._('database-parsing')["proj-name"]);
this._parsingPanelElmts.createProjectButton.html($.i18n._('database-parsing')["create-proj"]);
this._parsingPanelElmts.database_options.html($.i18n._('database-parsing')["option"]);
this._parsingPanelElmts.previewButton.html($.i18n._('database-parsing')["preview-button"]);
this._parsingPanelElmts.database_updating.html($.i18n._('database-parsing')["updating-preview"]);
this._parsingPanelElmts.database_discard_next.html($.i18n._('database-parsing')["discard-next"]);
this._parsingPanelElmts.database_discard.html($.i18n._('database-parsing')["discard"]);
this._parsingPanelElmts.database_limit_next.html($.i18n._('database-parsing')["limit-next"]);
this._parsingPanelElmts.database_limit.html($.i18n._('database-parsing')["limit"]);
this._parsingPanelElmts.database_store_row.html($.i18n._('database-parsing')["store-row"]);
this._parsingPanelElmts.database_store_cell.html($.i18n._('database-parsing')["store-cell"]);
if (this._parsingPanelResizer) {
$(window).unbind('resize', this._parsingPanelResizer);
}
this._parsingPanelResizer = function() {
var elmts = self._parsingPanelElmts;
var width = self._parsingPanel.width();
var height = self._parsingPanel.height();
var headerHeight = elmts.wizardHeader.outerHeight(true);
var controlPanelHeight = 250;
elmts.dataPanel
.css("left", "0px")
.css("top", headerHeight + "px")
.css("width", (width - DOM.getHPaddings(elmts.dataPanel)) + "px")
.css("height", (height - headerHeight - controlPanelHeight - DOM.getVPaddings(elmts.dataPanel)) + "px");
elmts.progressPanel
.css("left", "0px")
.css("top", headerHeight + "px")
.css("width", (width - DOM.getHPaddings(elmts.progressPanel)) + "px")
.css("height", (height - headerHeight - controlPanelHeight - DOM.getVPaddings(elmts.progressPanel)) + "px");
elmts.controlPanel
.css("left", "0px")
.css("top", (height - controlPanelHeight) + "px")
.css("width", (width - DOM.getHPaddings(elmts.controlPanel)) + "px")
.css("height", (controlPanelHeight - DOM.getVPaddings(elmts.controlPanel)) + "px");
};
$(window).resize(this._parsingPanelResizer);
this._parsingPanelResizer();
this._parsingPanelElmts.startOverButton.click(function() {
// explicitly cancel the import job
Refine.CreateProjectUI.cancelImportingJob(self._jobID);
delete self._jobID;
delete self._options;
self._createProjectUI.showSourceSelectionPanel();
});
this._parsingPanelElmts.createProjectButton.click(function() { self._createProject(); });
this._parsingPanelElmts.previewButton.click(function() { self._updatePreview(); });
//alert("datetime::" + $.now());
//this._parsingPanelElmts.projectNameInput[0].value = this._queryInfo.connectionName + "_" + this._queryInfo.databaseUser + "_" + $.now();
this._parsingPanelElmts.projectNameInput[0].value = this._queryInfo.databaseServer + "_" + this._queryInfo.initialDatabase + "_" + $.now();
if (this._options.limit > 0) {
this._parsingPanelElmts.limitCheckbox.prop("checked", true);
this._parsingPanelElmts.limitInput[0].value = this._options.limit.toString();
}
if (this._options.skipDataLines > 0) {
this._parsingPanelElmts.skipCheckbox.prop("checked", true);
this._parsingPanelElmts.skipInput.value[0].value = this._options.skipDataLines.toString();
}
if (this._options.storeBlankRows) {
this._parsingPanelElmts.storeBlankRowsCheckbox.prop("checked", true);
}
if (this._options.storeBlankCellsAsNulls) {
this._parsingPanelElmts.storeBlankCellsAsNullsCheckbox.prop("checked", true);
}
var onChange = function() {
self._scheduleUpdatePreview();
};
this._parsingPanel.find("input").bind("change", onChange);
this._parsingPanel.find("select").bind("change", onChange);
this._createProjectUI.showCustomPanel(this._parsingPanel);
this._updatePreview();
};
Refine.DatabaseImportController.prototype._scheduleUpdatePreview = function() {
if (this._timerID != null) {
window.clearTimeout(this._timerID);
this._timerID = null;
}
var self = this;
this._timerID = window.setTimeout(function() {
self._timerID = null;
self._updatePreview();
}, 500); // 0.5 second
};
Refine.DatabaseImportController.prototype._updatePreview = function() {
var self = this;
// alert("query::" + this._queryInfo.query);
this._parsingPanelElmts.dataPanel.hide();
this._parsingPanelElmts.progressPanel.show();
this._queryInfo.options = JSON.stringify(this.getOptions());
//alert("options:" + this._queryInfo.options);
$.post(
"command/core/importing-controller?" + $.param({
"controller": "database/database-import-controller",
"jobID": this._jobID,
"subCommand": "parse-preview"
}),
this._queryInfo,
function(result) {
if (result.status == "ok") {
self._getPreviewData(function(projectData) {
self._parsingPanelElmts.progressPanel.hide();
self._parsingPanelElmts.dataPanel.show();
new Refine.PreviewTable(projectData, self._parsingPanelElmts.dataPanel.unbind().empty());
});
} else {
alert('Errors:\n' + (result.message) ? result.message : Refine.CreateProjectUI.composeErrorMessage(job));
self._parsingPanelElmts.progressPanel.hide();
Refine.CreateProjectUI.cancelImportingJob(self._jobID);
delete self._jobID;
delete self._options;
self._createProjectUI.showSourceSelectionPanel();
}
},
"json"
);
};
Refine.DatabaseImportController.prototype._getPreviewData = function(callback, numRows) {
var self = this;
var result = {};
$.post(
"command/core/get-models?" + $.param({ "importingJobID" : this._jobID }),
null,
function(data) {
for (var n in data) {
if (data.hasOwnProperty(n)) {
result[n] = data[n];
}
}
$.post(
"command/core/get-rows?" + $.param({
"importingJobID" : self._jobID,
"start" : 0,
"limit" : numRows || 100 // More than we parse for preview anyway
}),
null,
function(data) {
result.rowModel = data;
callback(result);
},
"jsonp"
);
},
"json"
);
};
Refine.DatabaseImportController.prototype._createProject = function() {
var projectName = $.trim(this._parsingPanelElmts.projectNameInput[0].value);
if (projectName.length == 0) {
window.alert("Please name the project.");
this._parsingPanelElmts.projectNameInput.focus();
return;
}
var self = this;
var options = this.getOptions();
options.projectName = projectName;
this._queryInfo.options = JSON.stringify(options);
$.post(
"command/core/importing-controller?" + $.param({
"controller": "database/database-import-controller",
"jobID": this._jobID,
"subCommand": "create-project"
}),
this._queryInfo,
function(o) {
if (o.status == 'error') {
alert(o.message);
} else {
var start = new Date();
var timerID = window.setInterval(
function() {
self._createProjectUI.pollImportJob(
start,
self._jobID,
timerID,
function(job) {
return "projectID" in job.config;
},
function(jobID, job) {
//alert("jobID::" + jobID + " job :" + job);
window.clearInterval(timerID);
Refine.CreateProjectUI.cancelImportingJob(jobID);
document.location = "project?project=" + job.config.projectID;
},
function(job) {
alert(Refine.CreateProjectUI.composeErrorMessage(job));
}
);
},
1000
);
self._createProjectUI.showImportProgressPanel($.i18n._('database-import')["creating"], function() {
// stop the timed polling
window.clearInterval(timerID);
// explicitly cancel the import job
Refine.CreateProjectUI.cancelImportingJob(jobID);
self._createProjectUI.showSourceSelectionPanel();
});
}
},
"json"
);
};

144
extensions/database/module/scripts/index/database-import-form.html
View File

@ -1,144 +0,0 @@
<div bind="databasePanel" class="database-container">
<div id = "databaseLayoutDiv" class="grid-layout layout-div">
<div class="pure-g">
<div class="pure-u-1-5">
<div class="pure-u-1"><button type="button" id="newConnectionButtonDiv" bind="newConnectionButton" class="pure-button pure-button-primary">New Connection</button></div>
<div class="pure-u-1-2" style="border-bottom: 1px dashed; border-color:lightgrey; margin-top:1px; padding-right:1px;"></div>
<div class="pure-u-1 sidebarDiv" bind="sidebarDiv">
<div class="pure-menu pure-menu-scrollable custom-restricted">
<span class="pure-menu-heading" id="savedConnectionSpan">Saved Connections</span>
<ul class="pure-menu-list" bind="menuListUl" id="menuListUl"></ul>
</div>
</div>
</div>
<div class="connection-div-layout pure-u-4-5">
<div id = "newConnectionDiv" class="new-connection-div " bind="newConnectionDiv">
<!-- <div class="panel panel-info"> -->
<form class="pure-form pure-form-aligned">
<fieldset class="new-connection-fieldset">
<!-- <div class="pure-control-group" style="border-bottom: 1px solid gray;">New Connection Editor </div> -->
<legend class="new-connection-legend pure-input-1-2">New Connection Editor</legend>
<div class="pure-control-group">
<label id="connectionNameLabel" for="name">Name:</label>
<input bind="connectionNameInput" id="connectionName" type="text" placeholder="Enter Connection Name" value="127.0.0.1" class="pure-input-1-3" required>
</div>
<div class="pure-control-group">
<label id="databaseTypeLabel" for="databaseType">Database Type:</label>
<select name="selection" id="databaseTypeSelect" bind="databaseTypeSelect" class="pure-input-1-3" required>
<option value="postgresql">PostgreSQL</option>
<option value="mysql">MySQL</option>
<option value="mariadb">MariaDB</option>
</select>
</div>
<div class="pure-control-group">
<label id="databaseHostLabel" for="databaseHost">Database Host:</label>
<input bind="databaseHostInput" id="databaseHost" type="text" placeholder="Enter Database Host Address" value="localhost" class="pure-input-1-3" required>
</div>
<div class="pure-control-group">
<label id="databasePortLabel" for="databasePort">Database Port:</label>
<input bind="databasePortInput" id="databasePort" type="text" placeholder="Enter Database Port e.g. 3306" value="5432" class="pure-input-1-3" required>
</div>
<div class="pure-control-group">
<label id="databaseUserLabel" for="databaseUser">Database User:</label>
<input bind="databaseUserInput" id="databaseUser" type="text" placeholder="Enter Database User" value="postgres" class="pure-input-1-3" required>
</div>
<div class="pure-control-group">
<label id="databasePasswordLabel" for="databasePassword">Database Password:</label>
<input bind="databasePasswordInput" id="databasePassword" type="password" placeholder="Enter Database Password" class="pure-input-1-3" required>
</div>
<div class="pure-control-group">
<label id="databaseNameLabel" for="initialDatabase">Database Name:</label>
<input bind="initialDatabaseInput" id="initialDatabase" type="text" placeholder="Enter Database" class="pure-input-1-3" required>
</div>
<div class="pure-control-group" style="display:none;">
<label id="databaseSchemaLabel" for="initialSchema">Schema Name:</label>
<input bind="initialSchemaInput" id="initialSchema" type="text" placeholder="Enter Initial Schema" class="pure-input-1-3" required>
</div>
<div class="pure-controls" id="newConnectionControlDiv">
<button type="button" id="databaseTestButton" bind="testDatabaseButton" class="pure-button pure-button-primary"><span>Test</span></button>
<button type="button" id="databaseSaveButton" bind="saveConnectionButton" class="button-success pure-button">Save</button>
<button type="button" id="databaseConnectButton" bind="databaseConnectButton" class="button-secondary pure-button">Connect</button>
</div>
<div class="pure-controls" id="editConnectionControlDiv" style="display: none;">
<button type="button" id="connectionEditButton" bind="editConnectionButton" class="pure-button pure-button-primary"><span>Edit</span></button>
<button type="button" id="connectionEditCancelButton" bind="cancelEditConnectionButton" class="pure-button">Cancel</button>
</div>
</fieldset>
</form>
<!-- </div> --> <!--End Panel Div -->
</div><!--End NewConnectionDiv -->
<div class="sql-editor-div grid-layout" bind="sqlEditorDiv" id="sqlEditorDiv" style="display: none;" >
<form class="pure-form pure-form-stacked">
<input type="hidden" id="currentConnectionNameInput" name="currentConnectionName">
<input type="hidden" id="currentDatabaseTypeInput" name="currentDatabaseType">
<input type="hidden" id="currentDatabaseUserInput" name="currentDatabaseUser">
<input type="hidden" id="currentDatabasePasswordInput" name="currentDatabasePassword">
<input type="hidden" id="currentDatabaseHostInput" name="currentDatabaseHost">
<input type="hidden" id="currentDatabasePortInput" name="currentDatabasePort">
<input type="hidden" id="currentInitialDatabaseInput" name="currentInitialDatabase">
<div class="panel panel-info pure-input-3-4">
<div class="panel-heading">Query Editor </div>
<div class="panel-body">
<fieldset style="padding:2px; margin-top:5px;">
<textarea id="queryTextArea" bind="queryTextArea" class="pure-input-1 no-resize" placeholder="Enter your query" rows="10" >SELECT * FROM</textarea>
</fieldset>
<div class="alert alert-info" id="connectionParameterSpan"></div>
<!-- <select name="querySelect" id="queryHistorySelect" bind="queryHistorySelect" class="pure-input-1" style="padding-bottom:2px;">
<option value="1">Query History</option>
</select> -->
</div>
<div class="panel-footer">
<div class="pure-controls pure-input-1-2">
<button type="button" id="executeQueryBtn" bind="executeQueryButton" class="button-secondary pure-button">Preview Query Result</button>
<!-- <button type="button" bind="saveQueryButton" class="button-success pure-button">Save Query</button> -->
</div>
</div>
</div>
<!--
<div class="panel panel-info pure-input-1-2">
<div class="panel-heading">Saved Queries</div>
<div class="panel-body">
<div class="queryResultDiv pure-input-1 scrollable" bind="queryResultDiv" id="queryResultDiv" style="<!padding:2px; margin-top:5px;"> </div>
</div>
</div>
-->
</form>
</div><!-- End Sql Editor Div-->
</div>
</div> <!-- End pure-g -->
</div> <!-- End databaseLayoutDiv -->
</div><!-- End databaseContainer -->

53
extensions/database/module/scripts/index/database-parsing-panel.html
View File

@ -1,53 +0,0 @@
<div bind="wizardHeader" class="database-importing-wizard-header">
<div class="grid-layout layout-tightest layout-full">
<table>
<tr>
<td width="1%"><button bind="startOverButton" class="button">&laquo; Start Over</button></td>
<td width="98%" bind="database_conf_pars"></td>
<td style="text-align: right;" bind="database_proj_name"></td>
<td width="1%"><input class="inline" type="text" size="30" bind="projectNameInput" /></td>
<td width="1%"><button bind="createProjectButton" class="button button-primary"></button></td>
</tr>
</table>
</div>
</div>
<div bind="dataPanel" class="database-importing-parsing-data-panel"></div>
<div bind="progressPanel" class="database-importing-progress-data-panel">
<img src="images/large-spinner.gif" />
<span bind="database_updating"></span>
</div>
<div bind="controlPanel" class="database-importing-parsing-control-panel">
<div class="grid-layout layout-normal">
<table>
<tr>
<td bind="database_options"></td>
<td><button class="button" bind="previewButton"></button></td>
</tr>
<tr>
<td>
<div class="grid-layout layout-tightest">
<table>
<tr><td width="1%"><input type="checkbox" bind="skipCheckbox" id="$skip"/></td>
<td><label for="$skip" bind="database_discard_next"></label></td>
<td><input bind="skipInput" type="text" class="lightweight" size="2" value="0" />
<label for="$skip" bind="database_discard"></label></td>
</tr>
<tr><td width="1%"><input type="checkbox" bind="limitCheckbox" id="$limit" /></td>
<td><label for="$limit" bind="database_limit_next"></label></td>
<td><input bind="limitInput" type="text" class="lightweight" size="10" value="0" />
<label for="$limit" bind="database_limit"></label></td>
</tr>
<tr><td width="1%"><input type="checkbox" bind="storeBlankRowsCheckbox" id="$store-blank-rows" /></td>
<td colspan="2"><label for="$store-blank-rows" bind="database_store_row"></label></td>
</tr>
<tr><td width="1%"><input type="checkbox" bind="storeBlankCellsAsNullsCheckbox" id="$store-blank-cells" /></td>
<td colspan="2"><label for="$store-blank-cells" bind="database_store_cell"></label></td>
</tr>
</table>
</div>
</td>
</tr>
</table>
</div>
</div>

479
extensions/database/module/scripts/index/database-source-ui.js
View File

@ -1,479 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
Refine.DatabaseSourceUI = function(controller) {
this._controller = controller;
};
Refine.DatabaseSourceUI.prototype.attachUI = function(body) {
this._body = body;
this._body.html(DOM.loadHTML("database", "scripts/index/database-import-form.html"));
this._elmts = DOM.bind(this._body);
var self = this;
$('#database-title').text($.i18n._("database-import")["title"]);
$('#connectionNameLabel').html($.i18n._("database-source")["connectionNameLabel"]);
$('#databaseTypeLabel').html($.i18n._("database-source")["databaseTypeLabel"]);
$('#databaseHostLabel').text($.i18n._("database-source")["databaseHostLabel"]);
$('#databasePortLabel').text($.i18n._("database-source")["databasePortLabel"]);
$('#databaseUserLabel').text($.i18n._("database-source")["databaseUserLabel"]);
$('#databasePasswordLabel').text($.i18n._("database-source")["databasePasswordLabel"]);
$('#databaseNameLabel').text($.i18n._("database-source")["databaseNameLabel"]);
$('#databaseSchemaLabel').text($.i18n._("database-source")["databaseSchemaLabel"]);
$('#databaseTestButton').text($.i18n._("database-source")["databaseTestButton"]);
$('#databaseSaveButton').text($.i18n._("database-source")["databaseSaveButton"]);
$('#databaseConnectButton').text($.i18n._("database-source")["databaseConnectButton"]);
$('#newConnectionButtonDiv').text($.i18n._("database-source")["newConnectionButtonDiv"]);
$('#savedConnectionSpan').text($.i18n._("database-source")["savedConnectionSpan"]);
this._elmts.newConnectionButton.click(function(evt) {
self._resetDatabaseImportForm();
$( "#newConnectionDiv" ).show();
$( "#sqlEditorDiv" ).hide();
// self._body.find('.newConnectionDiv').show();
// self._body.find('.sqlEditorDiv').hide();
});
this._elmts.databaseTypeSelect.change(function(event) {
var type = $( "#databaseTypeSelect" ).val();
if(type === "postgresql"){
$( "#databaseUser" ).val("postgres");
$( "#databasePort" ).val("5432");
}else if(type === "mysql"){
$( "#databaseUser" ).val("root");
$( "#databasePort" ).val("3306");
}else if(type === "mariadb"){
$( "#databaseUser" ).val("root");
$( "#databasePort" ).val("3306");
}else{
$( "#databaseUser" ).val("root");
$( "#databasePort" ).val("3306");
}
});
this._elmts.testDatabaseButton.click(function(evt) {
if(self._validateNewConnectionForm() === true){
self._testDatabaseConnect(self._getConnectionInfo());
}
});
this._elmts.databaseConnectButton.click(function(evt) {
if(self._validateNewConnectionForm() === true){
self._connect(self._getConnectionInfo());
}
});
this._elmts.saveConnectionButton.click(function(evt) {
if(self._validateNewConnectionForm() == true){
var connectionNameInput = $.trim(self._elmts.connectionNameInput[0].value);
if (connectionNameInput.length === 0) {
window.alert($.i18n._('database-source')["alert-connection-name"]);
} else{
self._saveConnection(self._getConnectionInfo());
}
}
});
this._elmts.executeQueryButton.click(function(evt) {
var jdbcQueryInfo = {};
jdbcQueryInfo.connectionName = $( "#currentConnectionNameInput" ).val();
jdbcQueryInfo.databaseType = $( "#currentDatabaseTypeInput" ).val();
jdbcQueryInfo.databaseServer = $( "#currentDatabaseHostInput" ).val();
jdbcQueryInfo.databasePort = $( "#currentDatabasePortInput" ).val();
jdbcQueryInfo.databaseUser = $( "#currentDatabaseUserInput" ).val();
jdbcQueryInfo.databasePassword = $( "#currentDatabasePasswordInput" ).val();
jdbcQueryInfo.initialDatabase = $( "#currentInitialDatabaseInput" ).val();
jdbcQueryInfo.query = $.trim($( "#queryTextArea" ).val());
// if(jdbcQueryInfo.query && jdbcQueryInfo.query.length > 0 ) {
// self._executeQuery(jdbcQueryInfo);
// }else{
// window.alert($.i18n._('database-source')["alert-query"]);
// }
if(self.validateQuery(jdbcQueryInfo.query)) {
self._executeQuery(jdbcQueryInfo);
}
});
this._elmts.editConnectionButton.click(function(evt) {
if(self._validateNewConnectionForm() == true){
var connectionNameInput = $.trim(self._elmts.connectionNameInput[0].value);
if (connectionNameInput.length === 0) {
window.alert($.i18n._('database-source')["alert-connection-name"]);
} else{
self._editConnection(self._getConnectionInfo());
}
}
});
this._elmts.cancelEditConnectionButton.click(function(evt) {
self._resetDatabaseImportForm();
});
//load saved connections from settings file in user home directory
self._loadSavedConnections();
};//end Refine.createUI
Refine.DatabaseSourceUI.prototype.focus = function() {
};
Refine.DatabaseSourceUI.prototype.validateQuery = function(query) {
//alert("query::" + query);
if(!query || query.length <= 0 ) {
window.alert($.i18n._('database-source')["alert-query"]);
return false;
}
var allCapsQuery = query.toUpperCase();
if(allCapsQuery.indexOf('DROP') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " DROP");
return false;
}else if(allCapsQuery.indexOf('TRUNCATE') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " TRUNCATE");
return false;
}else if(allCapsQuery.indexOf('DELETE') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " DELETE");
return false;
}else if(allCapsQuery.indexOf('ROLLBACK') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " ROLLBACK");
return false;
}else if(allCapsQuery.indexOf('SHUTDOWN') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " SHUTDOWN");
return false;
}else if(allCapsQuery.indexOf('INSERT') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " INSERT");
return false;
}else if(allCapsQuery.indexOf('ALTER') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " ALTER");
return false;
}else if(allCapsQuery.indexOf('UPDATE') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " UPDATE");
return false;
}else if(allCapsQuery.indexOf('LIMIT') > -1){
window.alert($.i18n._('database-source')["alert-invalid-query-keyword"] + " LIMIT");
return false;
}
// if ((allCapsQuery.indexOf('DROP') > -1) || (allCapsQuery.indexOf('TRUNCATE') > -1) ||
// (allCapsQuery.indexOf('DELETE') > -1) || (allCapsQuery.indexOf('ROLLBACK') > -1)
// || (allCapsQuery.indexOf('SHUTDOWN') > -1) || (allCapsQuery.indexOf('INSERT') > -1)
// || (allCapsQuery.indexOf('ALTER') > -1) || (allCapsQuery.indexOf('UPDATE') > -1))
// {
// window.alert($.i18n._('database-source')["alert-invalid-query-keyword"]);
// return false;
// }
if(!allCapsQuery.startsWith('SELECT')) {
window.alert($.i18n._('database-source')["alert-invalid-query-select"]);
return false;
}
return true;
};
Refine.DatabaseSourceUI.prototype._editConnection = function(connectionInfo) {
//alert("database user:" + connectionInfo.databaseUser);
var self = this;
$.ajax({
url: 'command/database/saved-connection',
type: 'PUT',
contentType:'application/x-www-form-urlencoded',
data: connectionInfo,
success: function(settings) {
if(settings){
$( "#menuListUl" ).empty();
var items = [];
$.each(settings.savedConnections,function(index,savedConnection){
// items.push('<a href="#" class="list-group-item list-group-item-action">'
// + '<span class="context-menu-one context-menu-text" >' + savedConnection.connectionName + '</span>'
// + '<span class="sc-context-more-vert pull-right"> </span> </a>');
items.push('<li class="pure-menu-item sc-list"><a href="#" class="pure-menu-link context-menu-one">'
+ '<span class="context-menu-text" >' + savedConnection.connectionName + '</span>'
+ '<span class="sc-context-more-vert pull-right"> </span></a></li>');
})
$( "#menuListUl" ).append(items.join(''));
window.alert($.i18n._('database-source')["alert-connection-edit"]);
}
}
}).fail(function( jqXhr, textStatus, errorThrown ){
alert( textStatus + ':' + errorThrown );
});
};
Refine.DatabaseSourceUI.prototype._executeQuery = function(jdbcQueryInfo) {
var self = this;
//remove start line
var dismiss = DialogSystem.showBusy($.i18n._('database-import')["checking"]);
//$("#executeQueryBtn").text('Please wait ...').attr('disabled','disabled');
$.post(
"command/database/test-query",
jdbcQueryInfo,
function(jdbcConnectionResult) {
// $("#executeQueryBtn").text('Preview Query Result').removeAttr('disabled');
dismiss();
self._controller.startImportingDocument(jdbcQueryInfo);
},
"json"
).fail(function( jqXhr, textStatus, errorThrown ){
//$("#executeQueryBtn").text('Preview Query Result').removeAttr('disabled');
dismiss();
alert( textStatus + ':' + errorThrown );
});
//remove end line
//self._controller.startImportingDocument(jdbcQueryInfo);
}
Refine.DatabaseSourceUI.prototype._saveConnection = function(jdbcConnectionInfo) {
var self = this;
$.post(
"command/database/saved-connection",
jdbcConnectionInfo,
function(settings) {
if(settings){
// self._elmts.scListGroupDiv.empty();
self._elmts.menuListUl.empty();
var items = [];
$.each(settings.savedConnections,function(index,savedConnection){
// items.push('<a href="#" class="list-group-item list-group-item-action">'
// + '<span class="context-menu-one context-menu-text" >' + savedConnection.connectionName + '</span>'
// + '<span class="sc-context-more-vert pull-right"> </span> </a>');
items.push('<li class="pure-menu-item sc-list"><a href="#" class="pure-menu-link context-menu-one">'
+ '<span class="context-menu-text" >' + savedConnection.connectionName + '</span>'
+ '<span class="sc-context-more-vert pull-right"> </span></a></li>');
})
self._elmts.menuListUl.append(items.join(''));
}
},
"json"
).fail(function( jqXhr, textStatus, errorThrown ){
alert( textStatus + ':' + errorThrown );
});
};
Refine.DatabaseSourceUI.prototype._loadSavedConnections = function() {
var self = this;
$.get(
"command/database/saved-connection",
null,
function(settings) {
if(settings){
self._elmts.menuListUl.empty();
//self._elmts.scListGroupDiv.empty();
var items = [];
$.each(settings.savedConnections,function(index,savedConnection){
// items.push('<a href="#" class="list-group-item list-group-item-action context-menu-one">'
// + '<span class="context-menu-text" >' + savedConnection.connectionName + '</span>'
// + '<span class="sc-context-more-vert pull-right"> </span> </a>');
items.push('<li class="pure-menu-item sc-list"><a href="#" class="pure-menu-link context-menu-one">'
+ '<span class="context-menu-text" >' + savedConnection.connectionName + '</span>'
+ '<span class="sc-context-more-vert pull-right"> </span></a></li>');
})
self._elmts.menuListUl.append(items.join(''));
// self._elmts.scListGroupDiv.append(items.join(''));
}
},
"json"
);
};
Refine.DatabaseSourceUI.prototype._testDatabaseConnect = function(jdbcConnectionInfo) {
var self = this;
$.post(
"command/database/test-connect",
jdbcConnectionInfo,
function(jdbcConnectionResult) {
if(jdbcConnectionResult && jdbcConnectionResult.connectionResult == true){
window.alert("Test Connection Succeeded!");
}else{
window.alert("Unable to establish connection to database");
}
},
"json"
).fail(function( jqXhr, textStatus, errorThrown ){
alert( textStatus + ':' + errorThrown );
});
};
Refine.DatabaseSourceUI.prototype._connect = function(jdbcConnectionInfo) {
var self = this;
$.post(
"command/database/connect",
jdbcConnectionInfo,
function(databaseInfo) {
if(databaseInfo){
$( "#currentConnectionNameInput" ).val(jdbcConnectionInfo.connectionName);
$( "#currentDatabaseTypeInput" ).val(jdbcConnectionInfo.databaseType);
$( "#currentDatabaseUserInput" ).val(jdbcConnectionInfo.databaseUser);
$( "#currentDatabasePasswordInput" ).val(jdbcConnectionInfo.databasePassword);
$( "#currentDatabaseHostInput" ).val(jdbcConnectionInfo.databaseServer);
$( "#currentDatabasePortInput" ).val(jdbcConnectionInfo.databasePort);
$( "#currentInitialDatabaseInput" ).val(jdbcConnectionInfo.initialDatabase);
var connectionParam = "Connection :: "
+ "jdbc:"
+ jdbcConnectionInfo.databaseType + "://"
+ jdbcConnectionInfo.databaseServer + ":"
+ jdbcConnectionInfo.databasePort + "/"
+ jdbcConnectionInfo.initialDatabase;
//alert("connectionParam::" + connectionParam);
$( "#connectionParameterSpan" ).text(connectionParam);
// self._body.find('.newConnectionDiv').hide();
// self._body.find('.sqlEditorDiv').show();
$( "#newConnectionDiv" ).hide();
$( "#sqlEditorDiv" ).show();
}else{
window.alert("Unable to establish connection to database");
return;
}
},
"json"
).fail(function( jqXhr, textStatus, errorThrown ){
alert( textStatus + ':' + errorThrown );
});
};
Refine.DatabaseSourceUI.prototype._getConnectionInfo = function() {
var self = this;
var jdbcConnectionInfo = {};
jdbcConnectionInfo.connectionName = $.trim(self._elmts.connectionNameInput[0].value);
jdbcConnectionInfo.databaseType = $.trim(self._elmts.databaseTypeSelect[0].value);
jdbcConnectionInfo.databaseServer = $.trim(self._elmts.databaseHostInput[0].value);
jdbcConnectionInfo.databasePort = $.trim(self._elmts.databasePortInput[0].value);
jdbcConnectionInfo.databaseUser = $.trim(self._elmts.databaseUserInput[0].value);
jdbcConnectionInfo.databasePassword = $.trim(self._elmts.databasePasswordInput[0].value);
jdbcConnectionInfo.initialDatabase = $.trim(self._elmts.initialDatabaseInput[0].value);
jdbcConnectionInfo.initialSchema = $.trim(self._elmts.initialSchemaInput[0].value);
return jdbcConnectionInfo;
}
Refine.DatabaseSourceUI.prototype._validateNewConnectionForm = function() {
var self = this;
var connectionNameInput = $.trim(self._elmts.connectionNameInput[0].value);
var databaseTypeSelect = $.trim(self._elmts.databaseTypeSelect[0].value);
var databaseHostInput = $.trim(self._elmts.databaseHostInput[0].value);
var databasePortInput = $.trim(self._elmts.databasePortInput[0].value);
var databaseUserInput = $.trim(self._elmts.databaseUserInput[0].value);
var databasePasswordInput = $.trim(self._elmts.databasePasswordInput[0].value);
var initialDatabaseInput = $.trim(self._elmts.initialDatabaseInput[0].value);
var initialSchemaInput = $.trim(self._elmts.initialSchemaInput[0].value);
if (databaseHostInput.length === 0) {
window.alert($.i18n._('database-source')["alert-server"]);
return false;
}else if(databasePortInput.length === 0){
window.alert($.i18n._('database-source')["alert-port"]);
return false;
}else if(databaseUserInput.length === 0){
window.alert($.i18n._('database-source')["alert-user"]);
return false;
}else if(initialDatabaseInput.length === 0){
window.alert($.i18n._('database-source')["alert-initial-database"]);
return false;
}
else{
return true;
}
return true;
};
Refine.DatabaseSourceUI.prototype._resetDatabaseImportForm = function() {
var self = this;
$( "#connectionName" ).val("127.0.0.1");
$( "#databaseTypeSelect" ).val("postgresql");
$( "#databaseHost" ).val("127.0.0.1");
$( "#databasePort" ).val("5432");
$( "#databaseUser" ).val("postgres");
$( "#databasePassword" ).val("");
$( "#initialDatabase" ).val("");
$( "#initialSchema" ).val("");
$( "#editConnectionControlDiv" ).hide();
$( "#newConnectionControlDiv" ).show();
$('#connectionName').removeAttr('readonly');
};

2
extensions/database/module/scripts/index/jquery.contextMenu.min.js vendored
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extensions/database/module/scripts/index/jquery.ui.position.min.js vendored
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48
extensions/database/module/scripts/project/database-exporters.js
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@ -1,48 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
var dictionary = "";
$.ajax({
url : "command/core/load-language?",
type : "POST",
async : false,
data : {
module : "database",
},
success : function(data) {
dictionary = data;
}
});
$.i18n.setDictionary(dictionary);
// End internationalization
(function() {
})();

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147
extensions/database/module/styles/database-import.less vendored
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
@import-less url("theme.less");
.database-container {
// margin-left: 200px;
// width: 50%;
// min-height: 50%;
}
.cleared {
clear: both;
}
.custom-restricted-width {
/* To limit the menu width to the content of the menu: */
display: inline-block;
/* Or set the width explicitly: */
/* width: 10em; */
}
.scrollable {
height: 400px;
overflow: auto;
}
.database-importing-wizard-header {
font-size: 1.3em;
background: @chrome_primary;
padding: @padding_tight;
}
.database-importing-parsing-data-panel {
font-size: 1.1em;
position: absolute;
overflow: auto;
}
.database-importing-progress-data-panel {
position: absolute;
overflow: auto;
font-size: 200%;
padding: 3em;
background: rgba(255, 255, 255, 0.7);
text-align: center;
}
.database-importing-parsing-control-panel {
font-size: 1.3em;
position: absolute;
overflow: auto;
border-top: 5px solid @chrome_primary;
background: white;
padding: @padding_looser;
}
.context-menu-text {
padding: 4px 4px 2px 2px;
}
.custom-restricted {
height: 300px;
width: 200px;
border: 1px solid #bce8f1;
border-radius: 4px;
margin-right:10px;
padding-right:10px;
margin-bottom:10px;
}
.custom-restricted-width {
/* To limit the menu width to the content of the menu: */
display: inline-block;
/* Or set the width explicitly: */
/* width: 10em; */
margin-right:10px;
padding-right:10px;
margin-bottom:10px;
}
.no-resize {
resize: none;
}
.layout-div {
width : 100%;
}
.layout-div .connection-div-layout {
min-width: 400px;
}
.new-connection-legend {
padding-left: 2px;
margin-left: 2px;
border-color: #bce8f1;
}
.sql-editor-div {
margin-left:40px;
padding-left:20px;
}
.new-connection-div {
margin-left:40px;
padding-left:20px;
}
.new-connection-fieldset {
border: 1px solid gray;
}
.sc-list {
border-bottom: 1px dotted #bce8f1;
}
.sc-context-more-vert:after {
content: "";
display: inline-block;
background: url("../images/more-option-horiz-16.png") no-repeat top right;
// line-height: 1;
width: 16px;
height: 16px;
-webkit-font-smoothing: antialiased;
}

292
extensions/database/module/styles/jquery.contextMenu.css
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@charset "UTF-8";
/*!
* jQuery contextMenu - Plugin for simple contextMenu handling
*
* Version: v2.6.3
*
* Authors: Björn Brala (SWIS.nl), Rodney Rehm, Addy Osmani (patches for FF)
* Web: http://swisnl.github.io/jQuery-contextMenu/
*
* Copyright (c) 2011-2017 SWIS BV and contributors
*
* Licensed under
* MIT License http://www.opensource.org/licenses/mit-license
*
* Date: 2017-10-30T19:03:13.936Z
*/
@-webkit-keyframes cm-spin {
0% {
-webkit-transform: translateY(-50%) rotate(0deg);
transform: translateY(-50%) rotate(0deg);
}
100% {
-webkit-transform: translateY(-50%) rotate(359deg);
transform: translateY(-50%) rotate(359deg);
}
}
@-o-keyframes cm-spin {
0% {
-webkit-transform: translateY(-50%) rotate(0deg);
-o-transform: translateY(-50%) rotate(0deg);
transform: translateY(-50%) rotate(0deg);
}
100% {
-webkit-transform: translateY(-50%) rotate(359deg);
-o-transform: translateY(-50%) rotate(359deg);
transform: translateY(-50%) rotate(359deg);
}
}
@keyframes cm-spin {
0% {
-webkit-transform: translateY(-50%) rotate(0deg);
-o-transform: translateY(-50%) rotate(0deg);
transform: translateY(-50%) rotate(0deg);
}
100% {
-webkit-transform: translateY(-50%) rotate(359deg);
-o-transform: translateY(-50%) rotate(359deg);
transform: translateY(-50%) rotate(359deg);
}
}
@font-face {
font-family: "context-menu-icons";
font-style: normal;
font-weight: normal;
src: url("font/context-menu-icons.eot?2wp27");
src: url("font/context-menu-icons.eot?2wp27#iefix") format("embedded-opentype"), url("font/context-menu-icons.woff2?2wp27") format("woff2"), url("font/context-menu-icons.woff?2wp27") format("woff"), url("font/context-menu-icons.ttf?2wp27") format("truetype");
}
.context-menu-icon-add:before {
content: "\EA01";
}
.context-menu-icon-copy:before {
content: "\EA02";
}
.context-menu-icon-cut:before {
content: "\EA03";
}
.context-menu-icon-delete:before {
content: "\EA04";
}
.context-menu-icon-edit:before {
content: "\EA05";
}
.context-menu-icon-loading:before {
content: "\EA06";
}
.context-menu-icon-paste:before {
content: "\EA07";
}
.context-menu-icon-quit:before {
content: "\EA08";
}
.context-menu-icon::before {
position: absolute;
top: 50%;
left: 0;
width: 2em;
font-family: "context-menu-icons";
font-size: 1em;
font-style: normal;
font-weight: normal;
line-height: 1;
color: #2980b9;
text-align: center;
-webkit-transform: translateY(-50%);
-ms-transform: translateY(-50%);
-o-transform: translateY(-50%);
transform: translateY(-50%);
-webkit-font-smoothing: antialiased;
-moz-osx-font-smoothing: grayscale;
}
.context-menu-icon.context-menu-hover:before {
color: #fff;
}
.context-menu-icon.context-menu-disabled::before {
color: #bbb;
}
.context-menu-icon.context-menu-icon-loading:before {
-webkit-animation: cm-spin 2s infinite;
-o-animation: cm-spin 2s infinite;
animation: cm-spin 2s infinite;
}
.context-menu-icon.context-menu-icon--fa {
display: list-item;
font-family: inherit;
}
.context-menu-icon.context-menu-icon--fa::before {
position: absolute;
top: 50%;
left: 0;
width: 2em;
font-family: FontAwesome;
font-size: 1em;
font-style: normal;
font-weight: normal;
line-height: 1;
color: #2980b9;
text-align: center;
-webkit-transform: translateY(-50%);
-ms-transform: translateY(-50%);
-o-transform: translateY(-50%);
transform: translateY(-50%);
-webkit-font-smoothing: antialiased;
-moz-osx-font-smoothing: grayscale;
}
.context-menu-icon.context-menu-icon--fa.context-menu-hover:before {
color: #fff;
}
.context-menu-icon.context-menu-icon--fa.context-menu-disabled::before {
color: #bbb;
}
.context-menu-list {
position: absolute;
display: inline-block;
min-width: 13em;
max-width: 26em;
padding: .25em 0;
margin: .3em;
font-family: inherit;
font-size: inherit;
list-style-type: none;
background: #fff;
border: 1px solid #bebebe;
border-radius: .2em;
-webkit-box-shadow: 0 2px 5px rgba(0, 0, 0, .5);
box-shadow: 0 2px 5px rgba(0, 0, 0, .5);
}
.context-menu-item {
position: relative;
padding: .2em 2em;
color: #2f2f2f;
-webkit-user-select: none;
-moz-user-select: none;
-ms-user-select: none;
user-select: none;
background-color: #fff;
font: 15px "Helvetica Neue", Helvetica, Arial, sans-serif;
}
.context-menu-separator {
padding: 0;
margin: .35em 0;
border-bottom: 1px solid #e6e6e6;
}
.context-menu-item > label > input,
.context-menu-item > label > textarea {
-webkit-user-select: text;
-moz-user-select: text;
-ms-user-select: text;
user-select: text;
}
.context-menu-item.context-menu-hover {
color: #fff;
cursor: pointer;
background-color: #2980b9;
}
.context-menu-item.context-menu-disabled {
color: #bbb;
cursor: default;
background-color: #fff;
}
.context-menu-input.context-menu-hover {
color: #2f2f2f;
cursor: default;
}
.context-menu-submenu:after {
position: absolute;
top: 50%;
right: .5em;
z-index: 1;
width: 0;
height: 0;
content: '';
border-color: transparent transparent transparent #2f2f2f;
border-style: solid;
border-width: .25em 0 .25em .25em;
-webkit-transform: translateY(-50%);
-ms-transform: translateY(-50%);
-o-transform: translateY(-50%);
transform: translateY(-50%);
}
/**
* Inputs
*/
.context-menu-item.context-menu-input {
padding: .3em .6em;
}
/* vertically align inside labels */
.context-menu-input > label > * {
vertical-align: top;
}
/* position checkboxes and radios as icons */
.context-menu-input > label > input[type="checkbox"],
.context-menu-input > label > input[type="radio"] {
position: relative;
top: .12em;
margin-right: .4em;
}
.context-menu-input > label {
margin: 0;
}
.context-menu-input > label,
.context-menu-input > label > input[type="text"],
.context-menu-input > label > textarea,
.context-menu-input > label > select {
display: block;
width: 100%;
-webkit-box-sizing: border-box;
-moz-box-sizing: border-box;
box-sizing: border-box;
}
.context-menu-input > label > textarea {
height: 7em;
}
.context-menu-item > .context-menu-list {
top: .3em;
/* re-positioned by js */
right: -.3em;
display: none;
}
.context-menu-item.context-menu-visible > .context-menu-list {
display: block;
}
.context-menu-accesskey {
text-decoration: underline;
}
/*Custom to display icons*/

1549
extensions/database/module/styles/pure.css
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extensions/database/module/styles/theme.less
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
@import-less url("../../../../main/webapp/modules/core/styles/theme.less");

287
extensions/database/src/com/google/refine/extension/database/DBQueryResultImportReader.java
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseQueryInfo;
import com.google.refine.extension.database.model.DatabaseRow;
import com.google.refine.importers.TabularImportingParserBase.TableDataReader;
import com.google.refine.importing.ImportingJob;
public class DBQueryResultImportReader implements TableDataReader {
private static final Logger logger = LoggerFactory.getLogger("DBQueryResultImportReader");
private final ImportingJob job;
private final String querySource;
private List<DatabaseColumn> dbColumns;
private final int batchSize;
private int nextRow = 0; // 0-based
private int batchRowStart = 0; // 0-based
private boolean end = false;
private List<List<Object>> rowsOfCells = null;
private boolean usedHeaders = false;
private DatabaseService databaseService;
private DatabaseQueryInfo dbQueryInfo;
private int processedRows = 0;
private static int progress = 0;
public DBQueryResultImportReader(
ImportingJob job,
DatabaseService databaseService,
String querySource,
List<DatabaseColumn> columns,
DatabaseQueryInfo dbQueryInfo,
int batchSize) {
this.job = job;
this.querySource = querySource;
this.batchSize = batchSize;
this.dbColumns = columns;
this.databaseService = databaseService;
this.dbQueryInfo = dbQueryInfo;
if(logger.isDebugEnabled()) {
logger.debug("batchSize:" + batchSize);
}
}
@Override
public List<Object> getNextRowOfCells() throws IOException {
try {
if (!usedHeaders) {
List<Object> row = new ArrayList<Object>(dbColumns.size());
for (DatabaseColumn cd : dbColumns) {
row.add(cd.getName());
}
usedHeaders = true;
//logger.info("Exit::getNextRowOfCells return header::row:" + row);
return row;
}
if (rowsOfCells == null || (nextRow >= batchRowStart + rowsOfCells.size() && !end)) {
int newBatchRowStart = batchRowStart + (rowsOfCells == null ? 0 : rowsOfCells.size());
rowsOfCells = getRowsOfCells(newBatchRowStart);
processedRows = processedRows + rowsOfCells.size();
batchRowStart = newBatchRowStart;
setProgress(job, querySource, -1 /* batchRowStart * 100 / totalRows */);
}
if (rowsOfCells != null && nextRow - batchRowStart < rowsOfCells.size()) {
List<Object> result = rowsOfCells.get(nextRow++ - batchRowStart);
if(nextRow >= batchSize) {
rowsOfCells = getRowsOfCells(processedRows);
processedRows = processedRows + rowsOfCells.size();
if(logger.isDebugEnabled()) {
logger.debug("[[ Returning last row in batch:nextRow::{}, processedRows:{} ]]", nextRow, processedRows);
}
nextRow = 0;
if(processedRows % 100 == 0) {
setProgress(job, querySource, progress++);
}
if(processedRows % 10000 == 0) {
if(logger.isDebugEnabled()) {
logger.debug("[[ {} rows processed... ]]",processedRows);
}
}
}
return result;
} else {
if(logger.isDebugEnabled()) {
logger.debug("[[processedRows:{} ]]", processedRows);
}
return null;
}
}catch(DatabaseServiceException e) {
logger.error("DatabaseServiceException::{}", e);
throw new IOException(e);
}
}
/**
* @param startRow
* @return
* @throws IOException
* @throws DatabaseServiceException
*/
private List<List<Object>> getRowsOfCells(int startRow) throws IOException, DatabaseServiceException {
//logger.info("Entry getRowsOfCells::startRow:" + startRow);
List<List<Object>> rowsOfCells = new ArrayList<List<Object>>(batchSize);
String query = databaseService.buildLimitQuery(batchSize, startRow, dbQueryInfo.getQuery());
//logger.info("batchSize::" + batchSize + " startRow::" + startRow + " query::" + query );
List<DatabaseRow> dbRows = databaseService.getRows(dbQueryInfo.getDbConfig(), query);
if(dbRows != null && !dbRows.isEmpty() && dbRows.size() > 0) {
for(DatabaseRow dbRow: dbRows) {
List<String> row = dbRow.getValues();
List<Object> rowOfCells = new ArrayList<Object>(row.size());
for (int j = 0; j < row.size() && j < dbColumns.size(); j++) {
String text = row.get(j);
if (text == null || text.isEmpty()) {
rowOfCells.add(null);
}else {
DatabaseColumn col = dbColumns.get(j);
if(col.getType() == DatabaseColumnType.NUMBER) {
try {
rowOfCells.add(Long.parseLong(text));
continue;
} catch (NumberFormatException e) {}
}else if(col.getType() == DatabaseColumnType.DOUBLE || col.getType() == DatabaseColumnType.FLOAT ) {
try {
double d = Double.parseDouble(text);
if (!Double.isInfinite(d) && !Double.isNaN(d)) {
rowOfCells.add(d);
continue;
}
} catch (NumberFormatException e) {}
}
rowOfCells.add(text);
}
}
rowsOfCells.add(rowOfCells);
}
}
end = dbRows.size() < batchSize + 1;
//logger.info("Exit::getRowsOfCells::rowsOfCells:{}", rowsOfCells);
return rowsOfCells;
}
private static void setProgress(ImportingJob job, String querySource, int percent) {
job.setProgress(percent, "Reading " + querySource);
}
public List<DatabaseColumn> getColumns() {
return dbColumns;
}
public void setColumns(List<DatabaseColumn> columns) {
this.dbColumns = columns;
}
public int getNextRow() {
return nextRow;
}
public void setNextRow(int nextRow) {
this.nextRow = nextRow;
}
public int getBatchRowStart() {
return batchRowStart;
}
public void setBatchRowStart(int batchRowStart) {
this.batchRowStart = batchRowStart;
}
public boolean isEnd() {
return end;
}
public void setEnd(boolean end) {
this.end = end;
}
public List<List<Object>> getRowsOfCells() {
return rowsOfCells;
}
public void setRowsOfCells(List<List<Object>> rowsOfCells) {
this.rowsOfCells = rowsOfCells;
}
public boolean isUsedHeaders() {
return usedHeaders;
}
public void setUsedHeaders(boolean usedHeaders) {
this.usedHeaders = usedHeaders;
}
public ImportingJob getJob() {
return job;
}
public String getQuerySource() {
return querySource;
}
public int getBatchSize() {
return batchSize;
}
}

270
extensions/database/src/com/google/refine/extension/database/DBQueryResultPreviewReader.java
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@ -1,270 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseQueryInfo;
import com.google.refine.extension.database.model.DatabaseRow;
import com.google.refine.importers.TabularImportingParserBase.TableDataReader;
import com.google.refine.importing.ImportingJob;
public class DBQueryResultPreviewReader implements TableDataReader {
private static final Logger logger = LoggerFactory.getLogger("DBQueryResultPreviewReader");
private final ImportingJob job;
private final String querySource;
private List<DatabaseColumn> dbColumns;
private final int batchSize;
private int nextRow = 0; // 0-based
private int batchRowStart = 0; // 0-based
private boolean end = false;
private List<List<Object>> rowsOfCells = null;
private boolean usedHeaders = false;
private DatabaseService databaseService;
private DatabaseQueryInfo dbQueryInfo;
public DBQueryResultPreviewReader(
ImportingJob job,
DatabaseService databaseService,
String querySource,
List<DatabaseColumn> columns,
DatabaseQueryInfo dbQueryInfo,
int batchSize) {
this.job = job;
this.querySource = querySource;
this.batchSize = batchSize;
this.dbColumns = columns;
this.databaseService = databaseService;
this.dbQueryInfo = dbQueryInfo;
logger.debug("DBQueryResultPreviewReader::batchSize:" + batchSize);
}
@Override
public List<Object> getNextRowOfCells() throws IOException {
// logger.info("Entry::getNextRowOfCells");
try {
if (!usedHeaders) {
List<Object> row = new ArrayList<Object>(dbColumns.size());
for (DatabaseColumn cd : dbColumns) {
row.add(cd.getName());
}
usedHeaders = true;
// logger.debug("Exit::getNextRowOfCells return header::row:" + row);
return row;
}
if (rowsOfCells == null || (nextRow >= batchRowStart + rowsOfCells.size() && !end)) {
int newBatchRowStart = batchRowStart + (rowsOfCells == null ? 0 : rowsOfCells.size());
rowsOfCells = getRowsOfCells(newBatchRowStart);
batchRowStart = newBatchRowStart;
setProgress(job, querySource, -1 /* batchRowStart * 100 / totalRows */);
// logger.info("getNextRowOfCells:: rowsOfCellsIsNull::rowsOfCells size:" + rowsOfCells.size() + ":batchRowStart:" + batchRowStart + " ::nextRow:" + nextRow);
}
if (rowsOfCells != null && nextRow - batchRowStart < rowsOfCells.size()) {
//logger.info("Exit::getNextRowOfCells :rowsOfCellsNotNull::rowsOfCells size:" + rowsOfCells.size() + ":batchRowStart:" + batchRowStart + " ::nextRow:" + nextRow);
return rowsOfCells.get(nextRow++ - batchRowStart);
} else {
if(logger.isDebugEnabled()) {
logger.debug("nextRow:{}, batchRowStart:{}", nextRow, batchRowStart);
}
return null;
}
}catch(DatabaseServiceException e) {
logger.error("DatabaseServiceException::preview:{}", e.getMessage());
IOException ioEx = new IOException(e.getMessage(), e);
throw ioEx;
}
}
/**
*
* @param startRow
* @return
* @throws IOException
* @throws DatabaseServiceException
*/
private List<List<Object>> getRowsOfCells(int startRow) throws IOException, DatabaseServiceException {
//logger.info("Entry getRowsOfCells::startRow:" + startRow);
List<List<Object>> rowsOfCells = new ArrayList<List<Object>>(batchSize);
String query = databaseService.buildLimitQuery(batchSize, startRow, dbQueryInfo.getQuery());
if(logger.isDebugEnabled()) {
logger.debug("batchSize::" + batchSize + " startRow::" + startRow + " query::" + query );
}
List<DatabaseRow> dbRows = databaseService.getRows(dbQueryInfo.getDbConfig(), query);
if(dbRows != null && !dbRows.isEmpty() && dbRows.size() > 0) {
for(DatabaseRow dbRow: dbRows) {
List<String> row = dbRow.getValues();
List<Object> rowOfCells = new ArrayList<Object>(row.size());
for (int j = 0; j < row.size() && j < dbColumns.size(); j++) {
String text = row.get(j);
if (text == null || text.isEmpty()) {
rowOfCells.add(null);
}else {
DatabaseColumn col = dbColumns.get(j);
if(col.getType() == DatabaseColumnType.NUMBER) {
try {
rowOfCells.add(Long.parseLong(text));
continue;
} catch (NumberFormatException e) {}
}else if(col.getType() == DatabaseColumnType.DOUBLE || col.getType() == DatabaseColumnType.FLOAT ) {
try {
double d = Double.parseDouble(text);
if (!Double.isInfinite(d) && !Double.isNaN(d)) {
rowOfCells.add(d);
continue;
}
} catch (NumberFormatException e) {}
}
rowOfCells.add(text);
}
}
rowsOfCells.add(rowOfCells);
}
}
end = dbRows.size() < batchSize + 1;
//logger.info("Exit::getRowsOfCells::rowsOfCells:{}", rowsOfCells);
return rowsOfCells;
}
private static void setProgress(ImportingJob job, String querySource, int percent) {
job.setProgress(percent, "Reading " + querySource);
}
public List<DatabaseColumn> getColumns() {
return dbColumns;
}
public void setColumns(List<DatabaseColumn> columns) {
this.dbColumns = columns;
}
public int getNextRow() {
return nextRow;
}
public void setNextRow(int nextRow) {
this.nextRow = nextRow;
}
public int getBatchRowStart() {
return batchRowStart;
}
public void setBatchRowStart(int batchRowStart) {
this.batchRowStart = batchRowStart;
}
public boolean isEnd() {
return end;
}
public void setEnd(boolean end) {
this.end = end;
}
public List<List<Object>> getRowsOfCells() {
return rowsOfCells;
}
public void setRowsOfCells(List<List<Object>> rowsOfCells) {
this.rowsOfCells = rowsOfCells;
}
public boolean isUsedHeaders() {
return usedHeaders;
}
public void setUsedHeaders(boolean usedHeaders) {
this.usedHeaders = usedHeaders;
}
public ImportingJob getJob() {
return job;
}
public String getQuerySource() {
return querySource;
}
public int getBatchSize() {
return batchSize;
}
}

43
extensions/database/src/com/google/refine/extension/database/DatabaseColumnType.java
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@ -1,43 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
public enum DatabaseColumnType {
STRING,
NUMBER,
DATETIME,
LOCATION,
BOOLEAN,
DATE,
DOUBLE,
FLOAT
}

131
extensions/database/src/com/google/refine/extension/database/DatabaseConfiguration.java
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@ -1,131 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
public class DatabaseConfiguration {
private String connectionName;
private String databaseType;
private String databaseHost;
private int databasePort;
private String databaseUser;
private String databasePassword;
private String databaseName;
private String databaseSchema;
//optional parameters
private boolean useSSL;
public String getConnectionName() {
return connectionName;
}
public void setConnectionName(String connectionName) {
this.connectionName = connectionName;
}
public String getDatabaseType() {
return databaseType;
}
public void setDatabaseType(String databaseType) {
this.databaseType = databaseType;
}
public String getDatabaseHost() {
return databaseHost;
}
public void setDatabaseHost(String databaseServer) {
this.databaseHost = databaseServer;
}
public int getDatabasePort() {
return databasePort;
}
public void setDatabasePort(int databasePort) {
this.databasePort = databasePort;
}
public String getDatabaseUser() {
return databaseUser;
}
public void setDatabaseUser(String databaseUser) {
this.databaseUser = databaseUser;
}
public String getDatabasePassword() {
return databasePassword;
}
public void setDatabasePassword(String databasePassword) {
this.databasePassword = databasePassword;
}
public String getDatabaseName() {
return databaseName;
}
public void setDatabaseName(String initialDatabase) {
this.databaseName = initialDatabase;
}
public String getDatabaseSchema() {
return databaseSchema;
}
public void setDatabaseSchema(String initialSchema) {
this.databaseSchema = initialSchema;
}
public boolean isUseSSL() {
return useSSL;
}
public void setUseSSL(boolean useSSL) {
this.useSSL = useSSL;
}
@Override
public String toString() {
return "DatabaseConfiguration [connectionName=" + connectionName + ", databaseType=" + databaseType
+ ", databaseHost=" + databaseHost + ", databasePort=" + databasePort + ", databaseUser=" + databaseUser
+ ", databaseName=" + databaseName + ", databaseSchema="
+ databaseSchema + ", useSSL=" + useSSL + "]";
}
}

493
extensions/database/src/com/google/refine/extension/database/DatabaseImportController.java
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@ -1,493 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.io.IOException;
import java.io.Writer;
import java.util.LinkedList;
import java.util.List;
import java.util.Properties;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONException;
import org.json.JSONObject;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.ProjectManager;
import com.google.refine.ProjectMetadata;
import com.google.refine.RefineServlet;
import com.google.refine.commands.HttpUtilities;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseQueryInfo;
import com.google.refine.importers.TabularImportingParserBase;
import com.google.refine.importing.ImportingController;
import com.google.refine.importing.ImportingJob;
import com.google.refine.importing.ImportingManager;
import com.google.refine.model.Project;
import com.google.refine.util.JSONUtilities;
import com.google.refine.util.ParsingUtilities;
public class DatabaseImportController implements ImportingController {
private static final Logger logger = LoggerFactory.getLogger("DatabaseImportController");
protected RefineServlet servlet;
public static int DEFAULT_PREVIEW_LIMIT = 100;
public static String OPTIONS_KEY = "options";
@Override
public void init(RefineServlet servlet) {
this.servlet = servlet;
}
@Override
public void doGet(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
HttpUtilities.respond(response, "error", "GET not implemented");
}
@Override
public void doPost(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
if(logger.isDebugEnabled()){
logger.debug("doPost Query String::{}", request.getQueryString());
}
response.setCharacterEncoding("UTF-8");
Properties parameters = ParsingUtilities.parseUrlParameters(request);
String subCommand = parameters.getProperty("subCommand");
if(logger.isDebugEnabled()){
logger.info("doPost::subCommand::{}", subCommand);
}
if ("initialize-parser-ui".equals(subCommand)) {
doInitializeParserUI(request, response, parameters);
} else if ("parse-preview".equals(subCommand)) {
try {
doParsePreview(request, response, parameters);
} catch (DatabaseServiceException e) {
logger.error("doPost::DatabaseServiceException::{}", e);
HttpUtilities.respond(response, "error", getDbServiceException(e));
}
} else if ("create-project".equals(subCommand)) {
doCreateProject(request, response, parameters);
} else {
HttpUtilities.respond(response, "error", "No such sub command");
}
}
private String getDbServiceException(Exception ex) {
String message = "";
if(ex instanceof DatabaseServiceException) {
DatabaseServiceException dbEx = (DatabaseServiceException) ex;
if(dbEx.isSqlException()) {
message = message + dbEx.getSqlCode() + " " + dbEx.getSqlState();
}
}
message = message + ex.getMessage();
return message;
}
/**
*
* @param request
* @param response
* @param parameters
* @throws ServletException
* @throws IOException
*/
private void doInitializeParserUI(HttpServletRequest request, HttpServletResponse response, Properties parameters)
throws ServletException, IOException {
if(logger.isDebugEnabled()) {
logger.debug("::doInitializeParserUI::");
}
JSONObject result = new JSONObject();
JSONObject options = new JSONObject();
JSONUtilities.safePut(result, "status", "ok");
JSONUtilities.safePut(result, OPTIONS_KEY, options);
JSONUtilities.safePut(options, "skipDataLines", 0);
JSONUtilities.safePut(options, "storeBlankRows", true);
JSONUtilities.safePut(options, "storeBlankCellsAsNulls", true);
if(logger.isDebugEnabled()) {
logger.debug("doInitializeParserUI:::{}", result.toString());
}
HttpUtilities.respond(response, result.toString());
}
/**
* doParsePreview
* @param request
* @param response
* @param parameters
* @throws ServletException
* @throws IOException
* @throws DatabaseServiceException
*/
private void doParsePreview(
HttpServletRequest request, HttpServletResponse response, Properties parameters)
throws ServletException, IOException, DatabaseServiceException {
if(logger.isDebugEnabled()) {
logger.debug("JobID::{}", parameters.getProperty("jobID"));
}
long jobID = Long.parseLong(parameters.getProperty("jobID"));
ImportingJob job = ImportingManager.getJob(jobID);
if (job == null) {
HttpUtilities.respond(response, "error", "No such import job");
return;
}
DatabaseQueryInfo databaseQueryInfo = getQueryInfo(request);
if(databaseQueryInfo == null) {
HttpUtilities.respond(response, "error", "Invalid or missing Query Info");
}
job.updating = true;
try {
JSONObject optionObj = ParsingUtilities.evaluateJsonStringToObject(
request.getParameter("options"));
List<Exception> exceptions = new LinkedList<Exception>();
job.prepareNewProject();
parsePreview(
databaseQueryInfo,
job.project,
job.metadata,
job,
DEFAULT_PREVIEW_LIMIT ,
optionObj,
exceptions
);
// String exStr = getExceptionString(exceptions);
// logger.info("exceptions::" + exStr);
Writer w = response.getWriter();
JSONWriter writer = new JSONWriter(w);
try {
writer.object();
if (exceptions.size() == 0) {
job.project.update(); // update all internal models, indexes, caches, etc.
writer.key("status");
writer.value("ok");
} else {
writer.key("status");
writer.value("error");
writer.key("message");
writer.value(getExceptionString(exceptions));
// writer.array();
// writeErrors(writer, exceptions);
// writer.endArray();
}
writer.endObject();
} catch (JSONException e) {
throw new ServletException(e);
} finally {
w.flush();
w.close();
}
} catch (JSONException e) {
throw new ServletException(e);
} finally {
job.touch();
job.updating = false;
}
}
private String getExceptionString(List<Exception> exceptions) {
String ex = "";
for(Exception e: exceptions) {
ex = ex + e.getLocalizedMessage() + "\n";
}
// TODO Auto-generated method stub
return ex;
}
/**
*
* @param dbQueryInfo
* @param project
* @param metadata
* @param job
* @param limit
* @param options
* @param exceptions
* @throws DatabaseServiceException
*/
private static void parsePreview(
DatabaseQueryInfo dbQueryInfo,
Project project,
ProjectMetadata metadata,
final ImportingJob job,
int limit,
JSONObject options,
List<Exception> exceptions) throws DatabaseServiceException{
DatabaseService databaseService = DatabaseService.get(dbQueryInfo.getDbConfig().getDatabaseType());
String querySource = getQuerySource(dbQueryInfo);
List<DatabaseColumn> columns = databaseService.getColumns(dbQueryInfo.getDbConfig(), dbQueryInfo.getQuery());
setProgress(job, querySource, -1);
JSONUtilities.safePut(options, "ignoreLines", 0); // number of blank lines at the beginning to ignore
JSONUtilities.safePut(options, "headerLines", 1); // number of header lines
TabularImportingParserBase.readTable(
project,
metadata,
job,
new DBQueryResultPreviewReader(job, databaseService, querySource, columns, dbQueryInfo, 100),
querySource,
limit,
options,
exceptions
);
setProgress(job, querySource, 100);
}
/**
* doCreateProject
* @param request
* @param response
* @param parameters
*/
private void doCreateProject(HttpServletRequest request, HttpServletResponse response, Properties parameters)
throws ServletException, IOException{
if(logger.isDebugEnabled()) {
logger.debug("DatabaseImportController::doCreateProject:::{}", parameters.getProperty("jobID"));
}
long jobID = Long.parseLong(parameters.getProperty("jobID"));
final ImportingJob job = ImportingManager.getJob(jobID);
if (job == null) {
HttpUtilities.respond(response, "error", "No such import job");
return;
}
final DatabaseQueryInfo databaseQueryInfo = getQueryInfo(request);
if(databaseQueryInfo == null) {
HttpUtilities.respond(response, "error", "Invalid or missing Query Info");
}
job.updating = true;
try {
final JSONObject optionObj = ParsingUtilities.evaluateJsonStringToObject(
request.getParameter("options"));
final List<Exception> exceptions = new LinkedList<Exception>();
job.setState("creating-project");
final Project project = new Project();
new Thread() {
@Override
public void run() {
ProjectMetadata pm = new ProjectMetadata();
pm.setName(JSONUtilities.getString(optionObj, "projectName", "Untitled"));
pm.setEncoding(JSONUtilities.getString(optionObj, "encoding", "UTF-8"));
try {
parseCreate(
databaseQueryInfo,
project,
pm,
job,
-1,
optionObj,
exceptions
);
} catch (DatabaseServiceException e) {
logger.error("DatabaseImportController::doCreateProject:::run{}", e);
// throw new RuntimeException("DatabaseServiceException::", e);
}
if (!job.canceled) {
if (exceptions.size() > 0) {
job.setError(exceptions);
} else {
project.update(); // update all internal models, indexes, caches, etc.
ProjectManager.singleton.registerProject(project, pm);
job.setState("created-project");
job.setProjectID(project.id);
// logger.info("DatabaseImportController::doCreateProject:::run::projectID :{}", project.id);
}
job.touch();
job.updating = false;
}
}
}.start();
HttpUtilities.respond(response, "ok", "done");
} catch (JSONException e) {
throw new ServletException(e);
}
}
/**
* @param dbQueryInfo
* @param project
* @param metadata
* @param job
* @param limit
* @param options
* @param exceptions
* @throws DatabaseServiceException
*/
private static void parseCreate(
DatabaseQueryInfo dbQueryInfo,
Project project,
ProjectMetadata metadata,
final ImportingJob job,
int limit,
JSONObject options,
List<Exception> exceptions) throws DatabaseServiceException{
DatabaseService databaseService = DatabaseService.get(dbQueryInfo.getDbConfig().getDatabaseType());
String querySource = getQuerySource(dbQueryInfo);
List<DatabaseColumn> columns = databaseService.getColumns(dbQueryInfo.getDbConfig(), dbQueryInfo.getQuery());
setProgress(job, querySource, -1);
JSONUtilities.safePut(options, "ignoreLines", 0); // number of blank lines at the beginning to ignore
JSONUtilities.safePut(options, "headerLines", 1); // number of header lines
long startTime = System.currentTimeMillis() ;
TabularImportingParserBase.readTable(
project,
metadata,
job,
new DBQueryResultImportReader(job, databaseService, querySource, columns, dbQueryInfo, getCreateBatchSize()),
querySource,
limit,
options,
exceptions
);
long endTime = System.currentTimeMillis() ;
if(logger.isDebugEnabled()) {
logger.debug("Execution Time: {}", endTime - startTime);
}
setProgress(job, querySource, 100);
}
private static int getCreateBatchSize() {
String propBatchSize = DatabaseModuleImpl.getImportCreateBatchSize();
int batchSize = 100;
if(propBatchSize != null && !propBatchSize.isEmpty()) {
try {
batchSize = Integer.parseInt(propBatchSize);
}catch(NumberFormatException nfe) {
}
}
return batchSize;
}
/**
* @param request
* @return
*/
private DatabaseQueryInfo getQueryInfo(HttpServletRequest request) {
DatabaseConfiguration jdbcConfig = new DatabaseConfiguration();
jdbcConfig.setConnectionName(request.getParameter("connectionName"));
jdbcConfig.setDatabaseType(request.getParameter("databaseType"));
jdbcConfig.setDatabaseHost(request.getParameter("databaseServer"));
jdbcConfig.setDatabasePort(Integer.parseInt(request.getParameter("databasePort")));
jdbcConfig.setDatabaseUser(request.getParameter("databaseUser"));
jdbcConfig.setDatabasePassword(request.getParameter("databasePassword"));
jdbcConfig.setDatabaseName(request.getParameter("initialDatabase"));
jdbcConfig.setDatabaseSchema(request.getParameter("initialSchema"));
String query = request.getParameter("query");
if(logger.isDebugEnabled()) {
logger.debug("jdbcConfig::{}, query::{}", jdbcConfig, query);
}
if (jdbcConfig.getDatabaseHost() == null || jdbcConfig.getDatabaseName() == null
|| jdbcConfig.getDatabasePassword() == null || jdbcConfig.getDatabaseType() == null
|| jdbcConfig.getDatabaseUser() == null || query == null) {
if(logger.isDebugEnabled()) {
logger.debug("Missing Database Configuration::{}", jdbcConfig);
}
return null;
}
return new DatabaseQueryInfo(jdbcConfig, query);
}
private static String getQuerySource(DatabaseQueryInfo dbQueryInfo) {
String dbType = dbQueryInfo.getDbConfig().getDatabaseType();
return DatabaseService.get(dbType).getDatabaseUrl(dbQueryInfo.getDbConfig());
}
private static void setProgress(ImportingJob job, String querySource, int percent) {
job.setProgress(percent, "Reading " + querySource);
}
}

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@ -1,144 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.io.BufferedInputStream;
import java.io.File;
import java.io.FileInputStream;
import java.util.Properties;
import javax.servlet.ServletConfig;
import org.json.JSONException;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.Jsonizable;
import edu.mit.simile.butterfly.ButterflyModuleImpl;
public class DatabaseModuleImpl extends ButterflyModuleImpl implements Jsonizable {
private static final Logger logger = LoggerFactory.getLogger("DatabaseModuleImpl");
public static DatabaseModuleImpl instance;
public static Properties extensionProperties;
private static String DEFAULT_CREATE_PROJ_BATCH_SIZE = "100";
private static String DEFAULT_PREVIEW_BATCH_SIZE = "100";
@Override
public void init(ServletConfig config)
throws Exception {
// TODO Auto-generated method stub
super.init(config);
readModuleProperty();
// Set the singleton.
instance = this;
logger.info("*** Database Extension Module Initialization Completed!!***");
}
public static String getImportCreateBatchSize() {
if(extensionProperties == null) {
return DEFAULT_CREATE_PROJ_BATCH_SIZE;
}
return extensionProperties.getProperty("create.batchSize", DEFAULT_CREATE_PROJ_BATCH_SIZE);
}
public static String getImportPreviewBatchSize() {
if(extensionProperties == null) {
return DEFAULT_PREVIEW_BATCH_SIZE;
}
return extensionProperties.getProperty("preview.batchSize", DEFAULT_PREVIEW_BATCH_SIZE);
}
private void readModuleProperty() {
// The module path
File f = getPath();
if(logger.isDebugEnabled()) {
logger.debug("Module getPath(): {}", f.getPath());
}
// Load our custom properties.
File modFile = new File(f,"MOD-INF");
if(logger.isDebugEnabled()) {
logger.debug("Module File: {}", modFile.getPath());
}
if (modFile.exists()) {
extensionProperties = loadProperties (new File(modFile,"dbextension.properties"));
}
}
private Properties loadProperties(File propFile) {
Properties ps = new Properties();
try {
if (propFile.exists()) {
if(logger.isDebugEnabled()) {
logger.debug("Loading Extension properties ({})", propFile);
}
BufferedInputStream stream = null;
try {
ps = new Properties();
stream = new BufferedInputStream(new FileInputStream(propFile));
ps.load(stream);
} finally {
// Close the stream.
if (stream != null) stream.close();
}
}
} catch (Exception e) {
logger.error("Error loading Database properties", e);
}
return ps;
}
@Override
public void write(JSONWriter writer, Properties options)
throws JSONException {
// TODO Auto-generated method stub
}
}

125
extensions/database/src/com/google/refine/extension/database/DatabaseService.java
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.sql.Connection;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.mariadb.MariaDBDatabaseService;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseInfo;
import com.google.refine.extension.database.model.DatabaseRow;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
import com.google.refine.extension.database.pgsql.PgSQLDatabaseService;
public abstract class DatabaseService {
private static final Logger logger = LoggerFactory.getLogger("DatabaseService");
public static class DBType {
private static Map<String, DatabaseService> databaseServiceMap = new HashMap<String, DatabaseService>();
static {
try {
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
DatabaseService.DBType.registerDatabase(PgSQLDatabaseService.DB_NAME, PgSQLDatabaseService.getInstance());
DatabaseService.DBType.registerDatabase(MariaDBDatabaseService.DB_NAME, MariaDBDatabaseService.getInstance());
} catch (Exception e) {
logger.error("Exception occurred while trying to prepare databases!", e);
}
}
public static void registerDatabase(String name, DatabaseService db) {
if (!databaseServiceMap.containsKey(name)) {
//throw new DatabaseServiceException(name + " cannot be registered. Database Type already exists");
databaseServiceMap.put(name, db);
logger.info(String.format("Registered %s Database", name));
}else {
if(logger.isDebugEnabled()) {
logger.debug(name + " Database Type already exists");
}
}
}
public static DatabaseService getJdbcServiceFromType(String name) {
return databaseServiceMap.get(name);
}
}
protected String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName();
}
/**
* get Database
* @param dbType
* @return
*/
public static DatabaseService get(String dbType) {
logger.debug("get called on DatabaseService with, {}", dbType);
DatabaseService databaseService = DatabaseService.DBType.getJdbcServiceFromType(dbType.toLowerCase());
logger.debug("DatabaseService found: {}", databaseService.getClass());
return databaseService;
}
//Database Service APIs
public abstract Connection getConnection(DatabaseConfiguration dbConfig) throws DatabaseServiceException;
public abstract boolean testConnection(DatabaseConfiguration dbConfig) throws DatabaseServiceException;
public abstract DatabaseInfo connect(DatabaseConfiguration dbConfig) throws DatabaseServiceException;
public abstract DatabaseInfo executeQuery(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException;
public abstract DatabaseInfo testQuery(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException;
public abstract String buildLimitQuery(Integer limit, Integer offset, String query);
public abstract List<DatabaseColumn> getColumns(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException;
public abstract List<DatabaseRow> getRows(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException;
}

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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.sql.SQLException;
public class DatabaseServiceException extends Exception {
private static final long serialVersionUID = 1L;
private boolean sqlException;
private String sqlState;
private int sqlCode;
public DatabaseServiceException(String exception) {
super(exception);
}
public DatabaseServiceException(boolean sqlException, String sqlState, int sqlCode, String message) {
super(message);
this.sqlException = sqlException;
this.sqlState = sqlState;
this.sqlCode = sqlCode;
}
public boolean isSqlException() {
return sqlException;
}
public void setSqlException(boolean sqlException) {
this.sqlException = sqlException;
}
public String getSqlState() {
return sqlState;
}
public void setSqlState(String sqlState) {
this.sqlState = sqlState;
}
public int getSqlCode() {
return sqlCode;
}
public void setSqlCode(int sqlCode) {
this.sqlCode = sqlCode;
}
public DatabaseServiceException(String string, SQLException e) {
super(string, e);
}
}

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extensions/database/src/com/google/refine/extension/database/DatabaseUtils.java
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.io.File;
import java.io.IOException;
import java.util.ArrayList;
import java.util.List;
import java.util.ListIterator;
import org.codehaus.jackson.JsonGenerationException;
import org.codehaus.jackson.JsonParseException;
import org.codehaus.jackson.map.JsonMappingException;
import org.codehaus.jackson.map.ObjectMapper;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.ProjectManager;
import com.google.refine.io.FileProjectManager;
public class DatabaseUtils {
private static final Logger logger = LoggerFactory.getLogger("DatabaseUtils");
public final static String DATABASE_EXTENSION_DIR = "dbextension";
public final static String SETTINGS_FILE_NAME = ".saved-db-connections.json";
public final static String SAVED_CONNECTION_KEY = "savedConnections";
private static SimpleTextEncryptor textEncryptor = new SimpleTextEncryptor("Aa1Gb@tY7_Y");
public static int getSavedConnectionsSize() {
List<DatabaseConfiguration> scList = getSavedConnections();
if(scList == null || scList.isEmpty()) {
return 0;
}
return scList.size();
}
/**
* GET saved connections
* @return
*/
public static List<DatabaseConfiguration> getSavedConnections() {
ObjectMapper mapper = new ObjectMapper();
try {
String filename = getExtensionFilePath();
File file = new File(filename);
if (!file.exists()) {
//logger.debug("saved connections file not found, creating new: {}", filename);
String dirPath = getExtensionFolder();
File dirFile = new File(dirPath);
boolean dirExists = true;
if(!dirFile.exists()) {
dirExists = dirFile.mkdir();
}
if(dirExists) {
SavedConnectionContainer sc = new SavedConnectionContainer(new ArrayList<DatabaseConfiguration>());
mapper.writerWithDefaultPrettyPrinter().writeValue(new File(filename), sc);
return sc.getSavedConnections();
//return decryptAll(sc.getSavedConnections());
}
}
//logger.debug("saved connections file found {}", filename);
SavedConnectionContainer savedConnectionContainer = mapper.readValue(new File(filename), SavedConnectionContainer.class);
//return decryptAll(savedConnectionContainer.getSavedConnections());
return savedConnectionContainer.getSavedConnections();
} catch (JsonParseException e) {
logger.error("JsonParseException: {}", e);
} catch (JsonMappingException e) {
logger.error("JsonMappingException: {}", e);
} catch (IOException e) {
logger.error("IOException: {}", e);
}
return null;
}
/**
* GET one saved connection
* @param connectionName
* @return
*/
public static DatabaseConfiguration getSavedConnection(String connectionName) {
//logger.debug("get saved connection called with connectionName: {}", connectionName);
List<DatabaseConfiguration> savedConfigurations = getSavedConnections();
for (DatabaseConfiguration dc : savedConfigurations) {
//logger.debug("Saved Connection : {}", dc.getConnectionName());
if (dc.getConnectionName().equalsIgnoreCase(connectionName.trim())) {
//logger.debug("Saved Connection Found : {}", dc);
//dc.setDatabasePassword(decrypt(dc.getDatabasePassword()));
return dc;
}
}
return null;
}
public static String encrypt(String plainPassword) {
return textEncryptor.encrypt(plainPassword);
}
public static String decrypt(String encodedPassword) {
return textEncryptor.decrypt(encodedPassword);
}
public static List<DatabaseConfiguration> decryptAll(List<DatabaseConfiguration> savedConnections) {
List<DatabaseConfiguration> dbConfigs = new ArrayList<DatabaseConfiguration>(savedConnections.size());
for(DatabaseConfiguration d: savedConnections) {
d.setDatabasePassword(decrypt(d.getDatabasePassword()));
dbConfigs.add(d);
}
return dbConfigs;
}
/**
* ADD to saved connections
* @param dbConfig
*/
public static void addToSavedConnections(DatabaseConfiguration dbConfig){
try {
ObjectMapper mapper = new ObjectMapper();
String savedConnectionFile = getExtensionFilePath();
SavedConnectionContainer savedConnectionContainer = mapper.readValue(new File(savedConnectionFile), SavedConnectionContainer.class);
savedConnectionContainer.getSavedConnections().add(dbConfig);
mapper.writerWithDefaultPrettyPrinter().writeValue(new File(savedConnectionFile), savedConnectionContainer);
} catch (JsonGenerationException e1) {
logger.error("JsonGenerationException: {}", e1);
// e1.printStackTrace();
} catch (JsonMappingException e1) {
logger.error("JsonMappingException: {}", e1);
// e1.printStackTrace();
} catch (IOException e1) {
logger.error("IOException: {}", e1);
// e1.printStackTrace();
}
}
public static void deleteAllSavedConnections() {
if(logger.isDebugEnabled()) {
logger.debug("delete All Saved Connections called...");
}
try {
List<DatabaseConfiguration> savedConnections = getSavedConnections();
if(logger.isDebugEnabled()) {
logger.debug("Size before delete SavedConnections :: {}", savedConnections.size());
}
ArrayList<DatabaseConfiguration> newSavedConns = new ArrayList<DatabaseConfiguration>();
ObjectMapper mapper = new ObjectMapper();
String savedConnectionFile = getExtensionFilePath();
SavedConnectionContainer savedConnectionContainer = mapper.readValue(new File(savedConnectionFile), SavedConnectionContainer.class);
savedConnectionContainer.setSavedConnections(newSavedConns);
if(logger.isDebugEnabled()) {
logger.debug("Size after delete SavedConnections :: {}", savedConnectionContainer.getSavedConnections().size());
}
mapper.writerWithDefaultPrettyPrinter().writeValue(new File(savedConnectionFile), savedConnectionContainer);
} catch (JsonGenerationException e1) {
logger.error("JsonGenerationException: {}", e1);
// e1.printStackTrace();
} catch (JsonMappingException e1) {
logger.error("JsonMappingException: {}", e1);
// e1.printStackTrace();
} catch (IOException e1) {
logger.error("IOException: {}", e1);
// e1.printStackTrace();
}
}
/**
* DELETE saved connections
* @param connectionName
*/
public static void deleteSavedConnections(String connectionName) {
if(logger.isDebugEnabled()) {
logger.debug("deleteSavedConnections called with: {}", connectionName);
}
try {
List<DatabaseConfiguration> savedConnections = getSavedConnections();;
if(logger.isDebugEnabled()) {
logger.debug("Size before delete SavedConnections :: {}", savedConnections.size());
}
ArrayList<DatabaseConfiguration> newSavedConns = new ArrayList<DatabaseConfiguration>();
for(DatabaseConfiguration dc: savedConnections) {
if(!dc.getConnectionName().equalsIgnoreCase(connectionName.trim())) {
newSavedConns.add(dc);
}
}
ObjectMapper mapper = new ObjectMapper();
String savedConnectionFile = getExtensionFilePath();
SavedConnectionContainer savedConnectionContainer = mapper.readValue(new File(savedConnectionFile), SavedConnectionContainer.class);
savedConnectionContainer.setSavedConnections(newSavedConns);
if(logger.isDebugEnabled()) {
logger.debug("Size after delete SavedConnections :: {}", savedConnectionContainer.getSavedConnections().size());
}
mapper.writerWithDefaultPrettyPrinter().writeValue(new File(savedConnectionFile), savedConnectionContainer);
} catch (JsonGenerationException e1) {
logger.error("JsonGenerationException: {}", e1);
// e1.printStackTrace();
} catch (JsonMappingException e1) {
logger.error("JsonMappingException: {}", e1);
// e1.printStackTrace();
} catch (IOException e1) {
logger.error("IOException: {}", e1);
// e1.printStackTrace();
}
}
/**
* EDIT saved connections
* @param jdbcConfig
*/
public static void editSavedConnections(DatabaseConfiguration jdbcConfig) {
if(logger.isDebugEnabled()) {
logger.debug("Edit SavedConnections called with: {}", jdbcConfig);
}
try {
ObjectMapper mapper = new ObjectMapper();
String savedConnectionFile = getExtensionFilePath();
SavedConnectionContainer savedConnectionContainer = mapper.readValue(new File(savedConnectionFile), SavedConnectionContainer.class);
List<DatabaseConfiguration> savedConnections = savedConnectionContainer.getSavedConnections();
ListIterator<DatabaseConfiguration> savedConnArrayIter = (ListIterator<DatabaseConfiguration>) savedConnections.listIterator();
while (savedConnArrayIter.hasNext()) {
DatabaseConfiguration sc = (DatabaseConfiguration) savedConnArrayIter.next();
if (sc.getConnectionName().equals(jdbcConfig.getConnectionName())) {
savedConnArrayIter.remove();
}
}
savedConnections.add(jdbcConfig);
savedConnectionContainer.setSavedConnections(savedConnections);
mapper.writerWithDefaultPrettyPrinter().writeValue(new File(savedConnectionFile), savedConnectionContainer);
} catch (JsonGenerationException e1) {
logger.error("JsonGenerationException: {}", e1);
e1.printStackTrace();
} catch (JsonMappingException e1) {
logger.error("JsonMappingException: {}", e1);
e1.printStackTrace();
} catch (IOException e1) {
logger.error("IOException: {}", e1);
e1.printStackTrace();
}
}
public static String getExtensionFilePath(){
File dir = ((FileProjectManager) ProjectManager.singleton).getWorkspaceDir();
String fileSep = System.getProperty("file.separator");
String filename = dir.getPath() + fileSep + DATABASE_EXTENSION_DIR + fileSep + SETTINGS_FILE_NAME;
// logger.info("** extension file name: {} **", filename);
return filename;
}
public static String getExtensionFolder(){
File dir = ((FileProjectManager) ProjectManager.singleton).getWorkspaceDir();
String fileSep = System.getProperty("file.separator");
String filename = dir.getPath() + fileSep + DATABASE_EXTENSION_DIR;
return filename;
}
public static DatabaseColumnType getDbColumnType(int dbColumnType) {
switch (dbColumnType) {
case java.sql.Types.BIGINT:
return DatabaseColumnType.NUMBER;
case java.sql.Types.FLOAT:
return DatabaseColumnType.FLOAT;
case java.sql.Types.REAL:
return DatabaseColumnType.DOUBLE;
case java.sql.Types.DOUBLE:
return DatabaseColumnType.DOUBLE;
case java.sql.Types.NUMERIC:
return DatabaseColumnType.NUMBER;
case java.sql.Types.DECIMAL:
return DatabaseColumnType.STRING;
case java.sql.Types.CHAR:
return DatabaseColumnType.STRING;
case java.sql.Types.VARCHAR:
return DatabaseColumnType.STRING;
case java.sql.Types.LONGVARCHAR:
return DatabaseColumnType.STRING;
case java.sql.Types.DATE:
return DatabaseColumnType.DATE;
case java.sql.Types.TIME:
return DatabaseColumnType.DATETIME;
case java.sql.Types.TIMESTAMP:
return DatabaseColumnType.DATETIME;
case java.sql.Types.BINARY:
return DatabaseColumnType.STRING;
case java.sql.Types.VARBINARY:
return DatabaseColumnType.STRING;
case java.sql.Types.LONGVARBINARY:
return DatabaseColumnType.STRING;
case java.sql.Types.NULL:
return DatabaseColumnType.STRING;
case java.sql.Types.OTHER:
return DatabaseColumnType.STRING;
case java.sql.Types.JAVA_OBJECT:
return DatabaseColumnType.STRING;
case java.sql.Types.DISTINCT:
return DatabaseColumnType.STRING;
case java.sql.Types.STRUCT:
return DatabaseColumnType.STRING;
case java.sql.Types.ARRAY:
return DatabaseColumnType.STRING;
case java.sql.Types.BLOB:
return DatabaseColumnType.STRING;
case java.sql.Types.CLOB:
return DatabaseColumnType.STRING;
case java.sql.Types.REF:
return DatabaseColumnType.STRING;
case java.sql.Types.BOOLEAN:
return DatabaseColumnType.BOOLEAN;
case java.sql.Types.INTEGER:
return DatabaseColumnType.NUMBER;
default:
return DatabaseColumnType.STRING;
}
}
}

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@ -1,101 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.util.HashMap;
import java.util.Map;
public final class SQLType {
private static final Map<DriverContainer, SQLType> jdbcDriverRegistry = new HashMap<DriverContainer, SQLType>();
private final DriverContainer driverContainer;
private SQLType(DriverContainer container) {
this.driverContainer = container;
}
public static SQLType forName(String name) {
for (SQLType sqlType : jdbcDriverRegistry.values()) {
if (sqlType.getIdentifier().equalsIgnoreCase(name)) {
return sqlType;
}
}
return null;
}
public static SQLType registerSQLDriver(String identifier, String classpath) {
return registerSQLDriver(identifier, classpath, true);
}
public static SQLType registerSQLDriver(String identifier, String classpath, boolean useJDBCManager) {
DriverContainer driverContainer = new DriverContainer(identifier, classpath, useJDBCManager);
if (!jdbcDriverRegistry.containsKey(driverContainer)) {
SQLType newType = new SQLType(driverContainer);
jdbcDriverRegistry.put(driverContainer, newType);
return newType;
}
return null;
}
public String getClassPath() {
return this.driverContainer.classpath;
}
public String getIdentifier() {
return this.driverContainer.identifier;
}
public boolean usesJDBCManager() {
return this.driverContainer.useJDBCManager;
}
private static class DriverContainer {
public final String classpath;
public final String identifier;
public final boolean useJDBCManager;
private DriverContainer(String identifier, String classpath, boolean useJDBCManager) {
this.classpath = classpath;
this.identifier = identifier;
this.useJDBCManager = useJDBCManager;
}
public final boolean equals(Object obj) {
return obj instanceof DriverContainer && ((DriverContainer) obj).classpath.equals(this.classpath)
&& ((DriverContainer) obj).identifier.equals(this.identifier)
&& ((DriverContainer) obj).useJDBCManager == this.useJDBCManager;
}
}
}

58
extensions/database/src/com/google/refine/extension/database/SavedConnectionContainer.java
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@ -1,58 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import java.util.List;
public class SavedConnectionContainer {
private List<DatabaseConfiguration> savedConnections;
public List<DatabaseConfiguration> getSavedConnections() {
return savedConnections;
}
public void setSavedConnections(List<DatabaseConfiguration> savedConnections) {
this.savedConnections = savedConnections;
}
public SavedConnectionContainer(List<DatabaseConfiguration> savedConnections) {
super();
this.savedConnections = savedConnections;
}
public SavedConnectionContainer() {
}
}

76
extensions/database/src/com/google/refine/extension/database/SimpleTextEncryptor.java
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@ -1,76 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import org.jasypt.encryption.pbe.StandardPBEStringEncryptor;
import org.jasypt.util.text.TextEncryptor;
public class SimpleTextEncryptor implements TextEncryptor {
private final StandardPBEStringEncryptor encryptor;
@Override
public String decrypt(String encryptedMessage) {
return this.encryptor.decrypt(encryptedMessage);
}
@Override
public String encrypt(String message) {
return this.encryptor.encrypt(message);
}
public SimpleTextEncryptor(String passwordChars) {
super();
this.encryptor = new StandardPBEStringEncryptor();
this.encryptor.setAlgorithm("PBEWithMD5AndDES");
this.encryptor.setPasswordCharArray(passwordChars.toCharArray());
}
public void setPassword(final String password) {
this.encryptor.setPassword(password);
}
/**
* Sets a password, as a char[]
*
* @since 1.8
* @param password the password to be set.
*/
public void setPasswordCharArray(final char[] password) {
this.encryptor.setPasswordCharArray(password);
}
}

106
extensions/database/src/com/google/refine/extension/database/cmd/ConnectCommand.java
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@ -1,106 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.cmd;
import java.io.IOException;
import java.io.Writer;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.http.HttpStatus;
import org.codehaus.jackson.map.ObjectMapper;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
//import com.google.refine.ProjectManager;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.model.DatabaseInfo;
public class ConnectCommand extends DatabaseCommand {
private static final Logger logger = LoggerFactory.getLogger("ConnectCommand");
@Override
public void doPost(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
DatabaseConfiguration databaseConfiguration = getJdbcConfiguration(request);
if(logger.isDebugEnabled()) {
logger.debug("ConnectCommand::Post::{}", databaseConfiguration);
}
// ProjectManager.singleton.setBusy(true);
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
Writer w = response.getWriter();
JSONWriter writer = new JSONWriter(w);
ObjectMapper mapperObj = new ObjectMapper();
try {
DatabaseInfo databaseInfo = DatabaseService.get(databaseConfiguration.getDatabaseType())
.connect(databaseConfiguration);
String databaseInfoString = mapperObj.writeValueAsString(databaseInfo);
response.setStatus(HttpStatus.SC_OK);
writer.object();
writer.key("code");
writer.value("ok");
writer.key("databaseInfo");
writer.value(databaseInfoString);
writer.endObject();
} catch (DatabaseServiceException e) {
logger.error("ConnectCommand::Post::DatabaseServiceException::{}", e);
sendError(HttpStatus.SC_UNAUTHORIZED,response, writer, e);
}catch (Exception e) {
logger.error("ConnectCommand::Post::Exception::{}", e);
sendError(HttpStatus.SC_UNAUTHORIZED,response, writer, e);
} finally {
// w.flush();
w.close();
}
} catch (Exception e) {
logger.error("ConnectCommand::Post::Exception::{}", e);
throw new ServletException(e);
}
// finally {
// // ProjectManager.singleton.setBusy(false);
// }
}
}

116
extensions/database/src/com/google/refine/extension/database/cmd/DatabaseCommand.java
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@ -1,116 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.cmd;
import java.io.IOException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.commands.Command;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseServiceException;
public abstract class DatabaseCommand extends Command {
private static final Logger logger = LoggerFactory.getLogger("DatabaseCommand");
/**
*
* @param request
* @return
*/
protected DatabaseConfiguration getJdbcConfiguration(HttpServletRequest request) {
DatabaseConfiguration jdbcConfig = new DatabaseConfiguration();
jdbcConfig.setConnectionName(request.getParameter("connectionName"));
jdbcConfig.setDatabaseType(request.getParameter("databaseType"));
jdbcConfig.setDatabaseHost(request.getParameter("databaseServer"));
String dbPort = request.getParameter("databasePort");
if(dbPort != null) {
try {
jdbcConfig.setDatabasePort(Integer.parseInt(dbPort));
}catch(NumberFormatException nfe) {}
}
jdbcConfig.setDatabaseUser(request.getParameter("databaseUser"));
jdbcConfig.setDatabasePassword(request.getParameter("databasePassword"));
jdbcConfig.setDatabaseName(request.getParameter("initialDatabase"));
jdbcConfig.setDatabaseSchema(request.getParameter("initialSchema"));
if(logger.isDebugEnabled()) {
logger.debug("JDBC Configuration: {}", jdbcConfig);
}
return jdbcConfig;
}
/**
*
* @param status
* @param response
* @param writer
* @param e
* @throws IOException
*/
protected void sendError(int status, HttpServletResponse response, JSONWriter writer, Exception e)
throws IOException {
//logger.info("sendError::{}", writer);
response.sendError(status, e.getMessage());
}
/**
*
* @param status
* @param response
* @param writer
* @param e
* @throws IOException
*/
protected void sendError(int status, HttpServletResponse response, JSONWriter writer, DatabaseServiceException e)
throws IOException {
String message = "";
if(e.getSqlState() != null) {
message = message + "SqlCode:" + e.getSqlCode() + "SqlState" + e.getSqlState();
}
message = message + e.getMessage();
response.sendError(status, e.getMessage());
}
}

116
extensions/database/src/com/google/refine/extension/database/cmd/ExecuteQueryCommand.java
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@ -1,116 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.cmd;
import java.io.IOException;
import java.io.Writer;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.http.HttpStatus;
import org.codehaus.jackson.map.ObjectMapper;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
//import com.google.refine.ProjectManager;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.model.DatabaseInfo;
public class ExecuteQueryCommand extends DatabaseCommand {
private static final Logger logger = LoggerFactory.getLogger("ExecuteQueryCommand");
@Override
public void doPost(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
DatabaseConfiguration databaseConfiguration = getJdbcConfiguration(request);
String query = request.getParameter("queryString");
if(logger.isDebugEnabled()) {
logger.debug("QueryCommand::Post::DatabaseConfiguration::{}::Query::{} " ,databaseConfiguration, query);
}
//ProjectManager.singleton.setBusy(true);
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
Writer w = response.getWriter();
JSONWriter writer = new JSONWriter(w);
try {
DatabaseInfo databaseInfo = DatabaseService.get(databaseConfiguration.getDatabaseType())
.executeQuery(databaseConfiguration, query);
ObjectMapper mapperObj = new ObjectMapper();
response.setStatus(HttpStatus.SC_OK);
String jsonStr = mapperObj.writeValueAsString(databaseInfo);
if(logger.isDebugEnabled()) {
logger.debug("QueryCommand::Post::Result::{} " ,jsonStr);
}
writer.object();
writer.key("code");
writer.value("ok");
writer.key("QueryResult");
writer.value(jsonStr);
writer.endObject();
} catch (DatabaseServiceException e) {
logger.error("QueryCommand::Post::DatabaseServiceException::{}", e);
sendError(HttpStatus.SC_BAD_REQUEST, response, writer, e);
} catch (Exception e) {
logger.error("QueryCommand::Post::Exception::{}", e);
sendError(HttpStatus.SC_BAD_REQUEST,response, writer, e);
} finally {
w.close();
}
} catch (Exception e) {
logger.error("QueryCommand::Post::Exception::{}", e);
throw new ServletException(e);
}
// finally {
// // ProjectManager.singleton.setBusy(false);
// }
}
}

349
extensions/database/src/com/google/refine/extension/database/cmd/SavedConnectionCommand.java
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@ -1,349 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.cmd;
import java.io.IOException;
import java.io.Writer;
import java.util.List;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.http.HttpStatus;
import org.json.JSONException;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseUtils;
public class SavedConnectionCommand extends DatabaseCommand {
private static final Logger logger = LoggerFactory.getLogger("SavedConnectionCommand");
@Override
public void doGet(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
if(logger.isDebugEnabled()) {
logger.debug("SavedConnectionCommand::Get::connectionName::{}", request.getParameter("connectionName"));
}
String connectionName = request.getParameter("connectionName");
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
if(connectionName == null || connectionName.isEmpty()) {
writeSavedConnectionResponse(response);
}else {
DatabaseConfiguration savedConnection = DatabaseUtils.getSavedConnection(connectionName);
writeSavedConnectionResponse(response, savedConnection);
}
} catch (Exception e) {
logger.error("Exception while loading settings {}", e);
}
}
@Override
public void doDelete(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
if(logger.isDebugEnabled()) {
logger.debug("SavedConnectionCommand::Delete Connection: {}", request.getParameter("connectionName"));
}
String connectionName = request.getParameter("connectionName");
DatabaseConfiguration savedConn = DatabaseUtils.getSavedConnection(connectionName);
if(savedConn == null) {
//logger.error("Connection With name:: {} does not exist!", request.getParameter("connectionName"));
response.sendError(HttpStatus.SC_BAD_REQUEST, "Connection with name " + connectionName + " does not exists!");
response.flushBuffer();
return;
}
try {
DatabaseUtils.deleteSavedConnections(connectionName);
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
writeSavedConnectionResponse(response);
} catch (Exception e) {
logger.error("Exception while Deleting Connection with name: {}, error:{}",connectionName, e);
}
}
/**
*
* @param response
* @param savedConnection
* @throws IOException
* @throws JSONException
*/
private void writeSavedConnectionResponse(HttpServletResponse response, DatabaseConfiguration savedConnection) throws IOException, JSONException {
Writer w = response.getWriter();
try {
JSONWriter writer = new JSONWriter(w);
writer.object();
writer.key(DatabaseUtils.SAVED_CONNECTION_KEY);
writer.array();
writer.object();
writer.key("connectionName");
writer.value(savedConnection.getConnectionName());
writer.key("databaseType");
writer.value(savedConnection.getDatabaseType());
writer.key("databaseHost");
writer.value(savedConnection.getDatabaseHost());
writer.key("databasePort");
writer.value(savedConnection.getDatabasePort());
writer.key("databaseName");
writer.value(savedConnection.getDatabaseName());
writer.key("databasePassword");
//
String dbPasswd = savedConnection.getDatabasePassword();
if(dbPasswd != null && !dbPasswd.isEmpty()) {
dbPasswd = DatabaseUtils.decrypt(savedConnection.getDatabasePassword());
//logger.info("Decrypted Password::" + dbPasswd);
}
writer.value(dbPasswd);
//
// writer.value(savedConnection.getDatabasePassword());
writer.key("databaseSchema");
writer.value(savedConnection.getDatabaseSchema());
writer.key("databaseUser");
writer.value(savedConnection.getDatabaseUser());
writer.endObject();
writer.endArray();
writer.endObject();
}finally {
w.flush();
w.close();
}
}
/**
*
* @param response
* @throws IOException
* @throws JSONException
*/
private void writeSavedConnectionResponse(HttpServletResponse response) throws IOException, JSONException {
Writer w = response.getWriter();
try {
List<DatabaseConfiguration> savedConnections = DatabaseUtils.getSavedConnections();
JSONWriter writer = new JSONWriter(w);
writer.object();
writer.key(DatabaseUtils.SAVED_CONNECTION_KEY);
writer.array();
int size = savedConnections.size();
for (int i = 0; i < size; i++) {
writer.object();
DatabaseConfiguration dbConfig = (DatabaseConfiguration) savedConnections.get(i);
writer.key("connectionName");
writer.value(dbConfig.getConnectionName());
writer.key("databaseType");
writer.value(dbConfig.getDatabaseType());
writer.key("databaseHost");
writer.value(dbConfig.getDatabaseHost());
writer.key("databasePort");
writer.value(dbConfig.getDatabasePort());
writer.key("databaseName");
writer.value(dbConfig.getDatabaseName());
writer.key("databasePassword");
String dbPasswd = dbConfig.getDatabasePassword();
if(dbPasswd != null && !dbPasswd.isEmpty()) {
dbPasswd = DatabaseUtils.decrypt(dbConfig.getDatabasePassword());
}
// writer.value(dbConfig.getDatabasePassword());
writer.value(dbPasswd);
writer.key("databaseSchema");
writer.value(dbConfig.getDatabaseSchema());
writer.key("databaseUser");
writer.value(dbConfig.getDatabaseUser());
writer.endObject();
}
writer.endArray();
writer.endObject();
// logger.info("Saved Connection Get Response sent");
} finally {
w.flush();
w.close();
}
}
/**
* Add a new Saved JDBC connection configuration
*/
@Override
public void doPost(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
if(logger.isDebugEnabled()) {
logger.debug("doPost Connection: {}", request.getParameter("connectionName"));
}
DatabaseConfiguration jdbcConfig = getJdbcConfiguration(request);
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
if(jdbcConfig.getConnectionName() == null) {
response.sendError(HttpStatus.SC_BAD_REQUEST, "Connection Name is Required!");
response.flushBuffer();
return;
}
DatabaseConfiguration savedConn = DatabaseUtils.getSavedConnection(jdbcConfig.getConnectionName());
if(savedConn != null) {
response.sendError(HttpStatus.SC_BAD_REQUEST, "Connection with name " + jdbcConfig.getConnectionName() + " already exists!");
response.flushBuffer();
return;
}
if(jdbcConfig.getDatabasePassword() != null) {
//logger.debug("SavedConnectionCommand::Post::password::{}", jdbcConfig.getDatabasePassword());
jdbcConfig.setDatabasePassword(DatabaseUtils.encrypt(jdbcConfig.getDatabasePassword()));
}
DatabaseUtils.addToSavedConnections(jdbcConfig);
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
writeSavedConnectionResponse(response);
} catch (Exception e) {
logger.error("Exception while loading settings {}", e);
}
}
@Override
public void doPut(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
if(logger.isDebugEnabled()) {
logger.debug("databaseType::{} " , request.getParameter("databaseHost"));
}
// logger.info("databaseHost::{} " , request.getParameter("databaseServer"));
DatabaseConfiguration jdbcConfig = getJdbcConfiguration(request);
StringBuilder sb = new StringBuilder();
boolean error = false;
if(jdbcConfig.getConnectionName() == null) {
sb.append("Connection Name, ");
error = true;
}
if(jdbcConfig.getDatabaseHost() == null) {
sb.append("Database Host, ");
error = true;
}
if(jdbcConfig.getDatabaseUser() == null) {
sb.append("Database User, ");
error = true;
}
if(jdbcConfig.getDatabaseName() == null) {
sb.append("Database Name, ");
error = true;
}
if(error) {
sb.append(" is missing");
logger.info("Connection Parameter errors::{}", sb.toString());
response.sendError(HttpStatus.SC_BAD_REQUEST, sb.toString());
}
if(logger.isDebugEnabled()) {
logger.debug("Connection Config:: {}", jdbcConfig.getConnectionName());
}
if(jdbcConfig.getDatabasePassword() != null) {
jdbcConfig.setDatabasePassword(DatabaseUtils.encrypt(jdbcConfig.getDatabasePassword()));
}
DatabaseUtils.editSavedConnections(jdbcConfig);
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
writeSavedConnectionResponse(response);
} catch (Exception e) {
logger.error("Exception while loading settings {}", e);
}
}
}

107
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@ -1,107 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.cmd;
import java.io.IOException;
import java.io.Writer;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.http.HttpStatus;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
public class TestConnectCommand extends DatabaseCommand {
private static final Logger logger = LoggerFactory.getLogger("TestConnectCommand");
@Override
public void doPost(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
DatabaseConfiguration databaseConfiguration = getJdbcConfiguration(request);
if(logger.isDebugEnabled()) {
logger.debug("TestConnectCommand::Post::{}", databaseConfiguration);
}
//ProjectManager.singleton.setBusy(true);
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
Writer w = response.getWriter();
JSONWriter writer = new JSONWriter(w);
try {
boolean connectionTestResult = DatabaseService.get(databaseConfiguration.getDatabaseType())
.testConnection(databaseConfiguration);
response.setStatus(HttpStatus.SC_OK);
writer.object();
writer.key("connectionResult");
writer.value(connectionTestResult);
writer.key("code");
writer.value("ok");
writer.endObject();
} catch (DatabaseServiceException e) {
logger.error("TestConnectCommand::Post::DatabaseServiceException::{}", e);
sendError(HttpStatus.SC_UNAUTHORIZED,response, writer, e);
} finally {
// writer.endObject();
// w.flush();
w.close();
}
} catch (Exception e) {
logger.error("TestConnectCommand::Post::Exception::{}", e);
throw new ServletException(e);
} finally {
//ProjectManager.singleton.setBusy(false);
}
}
}

115
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@ -1,115 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.cmd;
import java.io.IOException;
import java.io.Writer;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.apache.http.HttpStatus;
import org.codehaus.jackson.map.ObjectMapper;
import org.json.JSONWriter;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
//import com.google.refine.ProjectManager;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.model.DatabaseInfo;
public class TestQueryCommand extends DatabaseCommand {
private static final Logger logger = LoggerFactory.getLogger("TestQueryCommand");
@Override
public void doPost(HttpServletRequest request, HttpServletResponse response)
throws ServletException, IOException {
DatabaseConfiguration dbConfig = getJdbcConfiguration(request);
String query = request.getParameter("query");
if(logger.isDebugEnabled()) {
logger.debug("TestQueryCommand::Post::DatabaseConfiguration::{}::Query::{} " ,dbConfig, query);
}
//ProjectManager.singleton.setBusy(true);
try {
response.setCharacterEncoding("UTF-8");
response.setHeader("Content-Type", "application/json");
Writer w = response.getWriter();
JSONWriter writer = new JSONWriter(w);
try {
DatabaseInfo databaseInfo = DatabaseService.get(dbConfig.getDatabaseType())
.testQuery(dbConfig, query);
ObjectMapper mapperObj = new ObjectMapper();
response.setStatus(HttpStatus.SC_OK);
String jsonStr = mapperObj.writeValueAsString(databaseInfo);
if(logger.isDebugEnabled()) {
logger.debug("TestQueryCommand::Post::Result::{} " ,jsonStr);
}
writer.object();
writer.key("code");
writer.value("ok");
writer.key("QueryResult");
writer.value(jsonStr);
writer.endObject();
} catch (DatabaseServiceException e) {
logger.error("TestQueryCommand::Post::DatabaseServiceException::{}", e);
sendError(HttpStatus.SC_BAD_REQUEST, response, writer, e);
} catch (Exception e) {
logger.error("TestQueryCommand::Post::Exception::{}", e);
sendError(HttpStatus.SC_BAD_REQUEST,response, writer, e);
} finally {
w.close();
}
} catch (Exception e) {
logger.error("TestQueryCommand::Post::Exception::{}", e);
throw new ServletException(e);
}
// finally {
// // ProjectManager.singleton.setBusy(false);
// }
}
}

186
extensions/database/src/com/google/refine/extension/database/mariadb/MariaDBConnectionManager.java
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@ -1,186 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.mariadb;
import java.sql.Connection;
import java.sql.DriverManager;
import java.sql.SQLException;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.SQLType;
public class MariaDBConnectionManager {
private static final Logger logger = LoggerFactory.getLogger("MariaDBConnectionManager");
private Connection connection;
private SQLType type;
private static MariaDBConnectionManager instance;
/**
*
* @param type
* @param databaseConfiguration
* @throws SQLException
*/
private MariaDBConnectionManager() {
type = SQLType.forName(MariaDBDatabaseService.DB_NAME);
}
/**
* Create a new instance of this connection manager.
*
* @return an instance of the manager
*
* @throws DatabaseServiceException
*/
public static MariaDBConnectionManager getInstance() throws DatabaseServiceException {
if (instance == null) {
//logger.info("::Creating new MariaDB Connection Manager ::");
instance = new MariaDBConnectionManager();
}
return instance;
}
/**
* Get the SQL Database type.
*
* @return the type
*/
public SQLType getType() {
return this.type;
}
/**
* testConnection
* @param databaseConfiguration
* @return
*/
public boolean testConnection(DatabaseConfiguration databaseConfiguration) throws DatabaseServiceException{
try {
boolean connResult = false;
Connection conn = getConnection(databaseConfiguration, true);
if(conn != null) {
connResult = true;
conn.close();
}
return connResult;
}
catch (SQLException e) {
logger.error("Test connection Failed!", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
/**
* Get a connection form the connection pool.
*
* @return connection from the pool
*/
public Connection getConnection(DatabaseConfiguration databaseConfiguration, boolean forceNewConnection) throws DatabaseServiceException{
try {
// logger.info("connection::{}, forceNewConnection: {}", connection, forceNewConnection);
if (connection != null && !forceNewConnection) {
// logger.debug("connection closed::{}", connection.isClosed());
if (!connection.isClosed()) {
if(logger.isDebugEnabled()) {
logger.debug("Returning existing connection::{}", connection);
}
return connection;
}
}
Class.forName(type.getClassPath());
DriverManager.setLoginTimeout(10);
String dbURL = getDatabaseUrl(databaseConfiguration);
connection = DriverManager.getConnection(dbURL, databaseConfiguration.getDatabaseUser(),
databaseConfiguration.getDatabasePassword());
if(logger.isDebugEnabled()) {
logger.debug("*** Acquired New connection for ::{} **** ", dbURL);
}
return connection;
} catch (ClassNotFoundException e) {
logger.error("Jdbc Driver not found", e);
throw new DatabaseServiceException(e.getMessage());
} catch (SQLException e) {
logger.error("SQLException::Couldn't get a Connection!", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
public void shutdown() {
if (connection != null) {
try {
connection.close();
}
catch (SQLException e) {
logger.warn("Non-Managed connection could not be closed. Whoops!", e);
}
}
}
private static String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType().toLowerCase() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName();
}
}

325
extensions/database/src/com/google/refine/extension/database/mariadb/MariaDBDatabaseService.java
View File

@ -1,325 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.mariadb;
import java.sql.Connection;
import java.sql.ResultSet;
import java.sql.SQLException;
import java.sql.Statement;
import java.util.ArrayList;
import java.util.List;
import org.mariadb.jdbc.MariaDbResultSetMetaData;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.DatabaseUtils;
import com.google.refine.extension.database.SQLType;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseInfo;
import com.google.refine.extension.database.model.DatabaseRow;
import com.google.refine.extension.database.mysql.MySQLConnectionManager;
public class MariaDBDatabaseService extends DatabaseService {
private static final Logger logger = LoggerFactory.getLogger("MariaDBDatabaseService");
public static final String DB_NAME = "mariadb";
public static final String DB_DRIVER = "org.mariadb.jdbc.Driver";
private static MariaDBDatabaseService instance;
private MariaDBDatabaseService() {
}
public static MariaDBDatabaseService getInstance() {
if (instance == null) {
SQLType.registerSQLDriver(DB_NAME, DB_DRIVER);
instance = new MariaDBDatabaseService();
if(logger.isDebugEnabled()) {
logger.debug("MariaDBDatabaseService Instance: {}", instance);
}
}
return instance;
}
@Override
public boolean testConnection(DatabaseConfiguration dbConfig) throws DatabaseServiceException{
return MariaDBConnectionManager.getInstance().testConnection(dbConfig);
}
@Override
public DatabaseInfo connect(DatabaseConfiguration dbConfig) throws DatabaseServiceException{
return getMetadata(dbConfig);
}
@Override
public DatabaseInfo executeQuery(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException{
try {
Connection connection = MariaDBConnectionManager.getInstance().getConnection(dbConfig, false);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
MariaDbResultSetMetaData metadata = (MariaDbResultSetMetaData)queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
ArrayList<DatabaseColumn> columns = new ArrayList<DatabaseColumn>(columnCount);
for (int i = 1; i <= columnCount; i++) {
DatabaseColumn dc = new DatabaseColumn(
metadata.getColumnName(i),
metadata.getColumnLabel(i),
DatabaseUtils.getDbColumnType(metadata.getColumnType(i)),
metadata.getColumnDisplaySize(i));
columns.add(dc);
}
int index = 0;
List<DatabaseRow> rows = new ArrayList<DatabaseRow>();
while (queryResult.next()) {
DatabaseRow row = new DatabaseRow();
row.setIndex(index);
List<String> values = new ArrayList<String>(columnCount);
for (int i = 1; i <= columnCount; i++) {
values.add(queryResult.getString(i));
}
row.setValues(values);
rows.add(row);
index++;
}
DatabaseInfo dbInfo = new DatabaseInfo();
dbInfo.setColumns(columns);
dbInfo.setRows(rows);
return dbInfo;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
} finally {
MariaDBConnectionManager.getInstance().shutdown();
}
}
/**
*
* @param connectionInfo
* @return
* @throws DatabaseServiceException
*/
private DatabaseInfo getMetadata(DatabaseConfiguration connectionInfo) throws DatabaseServiceException {
try {
Connection connection = MariaDBConnectionManager.getInstance().getConnection(connectionInfo, true);
if(connection != null) {
java.sql.DatabaseMetaData metadata;
metadata = connection.getMetaData();
int dbMajorVersion = metadata.getDatabaseMajorVersion();
int dbMinorVersion = metadata.getDatabaseMinorVersion();
String dbProductVersion = metadata.getDatabaseProductVersion();
String dbProductName = metadata.getDatabaseProductName();
DatabaseInfo dbInfo = new DatabaseInfo();
dbInfo.setDatabaseMajorVersion(dbMajorVersion);
dbInfo.setDatabaseMinorVersion(dbMinorVersion);
dbInfo.setDatabaseProductVersion(dbProductVersion);
dbInfo.setDatabaseProductName(dbProductName);
return dbInfo;
}
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
return null;
}
@Override
public String buildLimitQuery(Integer limit, Integer offset, String query) {
// if(logger.isDebugEnabled()) {
// logger.info( "<<< original input query::{} >>>" , query );
// }
//
final int len = query.length();
String parsedQuery = len > 0 && query.endsWith(";") ? query.substring(0, len - 1) : query;
StringBuilder sb = new StringBuilder();
sb.append(parsedQuery);
if(limit != null) {
sb.append(" LIMIT" + " " + limit);
}
if(offset != null) {
sb.append(" OFFSET" + " " + offset);
}
sb.append(";");
String parsedQueryOut = sb.toString();
// if(logger.isDebugEnabled()) {
// logger.info( "<<<Final input query::{} >>>" , parsedQueryOut );
// }
return parsedQueryOut;
}
@Override
public ArrayList<DatabaseColumn> getColumns(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException{
try {
Connection connection = MariaDBConnectionManager.getInstance().getConnection(dbConfig, true);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
MariaDbResultSetMetaData metadata = (MariaDbResultSetMetaData) queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
ArrayList<DatabaseColumn> columns = new ArrayList<DatabaseColumn>(columnCount);
for (int i = 1; i <= columnCount; i++) {
DatabaseColumn dc = new DatabaseColumn(metadata.getColumnName(i), metadata.getColumnLabel(i),
DatabaseUtils.getDbColumnType(metadata.getColumnType(i)), metadata.getColumnDisplaySize(i));
columns.add(dc);
}
return columns;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
@Override
public List<DatabaseRow> getRows(DatabaseConfiguration dbConfig, String query)
throws DatabaseServiceException {
try {
Connection connection = MariaDBConnectionManager.getInstance().getConnection(dbConfig, false);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
MariaDbResultSetMetaData metadata = (MariaDbResultSetMetaData)queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
int index = 0;
List<DatabaseRow> rows = new ArrayList<DatabaseRow>();
while (queryResult.next()) {
DatabaseRow row = new DatabaseRow();
row.setIndex(index);
List<String> values = new ArrayList<String>(columnCount);
for (int i = 1; i <= columnCount; i++) {
values.add(queryResult.getString(i));
}
row.setValues(values);
rows.add(row);
index++;
}
return rows;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
@Override
protected String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName() + "?useSSL=" + dbConfig.isUseSSL();
}
@Override
public Connection getConnection(DatabaseConfiguration dbConfig)
throws DatabaseServiceException {
// TODO Auto-generated method stub
return MariaDBConnectionManager.getInstance().getConnection(dbConfig, true);
}
@Override
public DatabaseInfo testQuery(DatabaseConfiguration dbConfig, String query)
throws DatabaseServiceException {
Statement statement = null;
ResultSet queryResult = null;
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(dbConfig, true);
statement = connection.createStatement();
queryResult = statement.executeQuery(query);
DatabaseInfo dbInfo = new DatabaseInfo();
return dbInfo;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
} finally {
try {
if (queryResult != null) {
queryResult.close();
}
if (statement != null) {
statement.close();
}
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
MySQLConnectionManager.getInstance().shutdown();
}
}
}

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@ -1,109 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.model;
import com.google.refine.extension.database.DatabaseColumnType;
public class DatabaseColumn {
private String name;
private int size;
private DatabaseColumnType type;
private String label;
public DatabaseColumnType getType() {
return type;
}
public void setType(DatabaseColumnType type) {
this.type = type;
}
public String getLabel() {
return label;
}
public void setLabel(String label) {
this.label = label;
}
public DatabaseColumn(String name, int size, DatabaseColumnType type) {
super();
this.name = name;
this.size = size;
this.type = type;
}
public DatabaseColumn(String name, String label, DatabaseColumnType type, int size) {
this.name = name;
this.label = label;
this.size = size;
this.type = type;
}
public String getName() {
return name;
}
public void setName(String name) {
this.name = name;
}
public int getSize() {
return size;
}
public void setSize(int size) {
this.size = size;
}
@Override
public String toString() {
return "DatabaseColumn [name=" + name + ", size=" + size + ", type=" + type + ", label=" + label + "]";
}
}

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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.model;
import java.util.ArrayList;
import java.util.List;
public class DatabaseInfo {
private List<DatabaseTable> tables;
private int dbMajorVersion;
private int dbMinorVersion;
private String dbProductVersion;
private String dbProductName;
private ArrayList<DatabaseColumn> columns;
private List<DatabaseRow> rows;
public DatabaseInfo() {
// TODO Auto-generated constructor stub
}
public List<DatabaseTable> getTables() {
return tables;
}
public void setTables(List<DatabaseTable> tables) {
this.tables = tables;
}
public void setDatabaseMajorVersion(int dbMajorVersion) {
this.dbMajorVersion = dbMajorVersion;
}
public void setDatabaseMinorVersion(int dbMinorVersion) {
this.dbMinorVersion = dbMinorVersion;
}
public void setDatabaseProductVersion(String dbProductVersion) {
this.dbProductVersion = dbProductVersion;
}
public void setDatabaseProductName(String dbProductName) {
this.dbProductName = dbProductName;
}
public int getDbMajorVersion() {
return dbMajorVersion;
}
public void setDbMajorVersion(int dbMajorVersion) {
this.dbMajorVersion = dbMajorVersion;
}
public int getDbMinorVersion() {
return dbMinorVersion;
}
public void setDbMinorVersion(int dbMinorVersion) {
this.dbMinorVersion = dbMinorVersion;
}
public String getDbProductVersion() {
return dbProductVersion;
}
public void setDbProductVersion(String dbProductVersion) {
this.dbProductVersion = dbProductVersion;
}
public String getDbProductName() {
return dbProductName;
}
public void setDbProductName(String dbProductName) {
this.dbProductName = dbProductName;
}
public void setColumns(ArrayList<DatabaseColumn> columns) {
this.columns = columns;
}
public void setRows(List<DatabaseRow> rows) {
this.rows = rows;
}
public ArrayList<DatabaseColumn> getColumns() {
return columns;
}
public List<DatabaseRow> getRows() {
return rows;
}
@Override
public String toString() {
return "DatabaseInfo [tables=" + tables + ", dbMajorVersion=" + dbMajorVersion + ", dbMinorVersion="
+ dbMinorVersion + ", dbProductVersion=" + dbProductVersion + ", dbProductName=" + dbProductName + "]";
}
}

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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.model;
import com.google.refine.extension.database.DatabaseConfiguration;
public class DatabaseQueryInfo {
private DatabaseConfiguration dbConfig;
private String query;
public DatabaseQueryInfo(DatabaseConfiguration databaseConfig, String query) {
super();
this.dbConfig = databaseConfig;
this.query = query;
}
public DatabaseConfiguration getDbConfig() {
return dbConfig;
}
public void setDbConfig(DatabaseConfiguration databaseConfig) {
this.dbConfig = databaseConfig;
}
public String getQuery() {
return query;
}
public void setQuery(String query) {
this.query = query;
}
}

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@ -1,62 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.model;
import java.util.List;
public class DatabaseRow {
private int index;
private List<String> values;
public int getIndex() {
return index;
}
public void setIndex(int index) {
this.index = index;
}
public List<String> getValues() {
return values;
}
public void setValues(List<String> values) {
this.values = values;
}
}

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@ -1,73 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.model;
import java.util.ArrayList;
import java.util.List;
public class DatabaseTable {
private List<DatabaseColumn> columns = new ArrayList<DatabaseColumn>();
private String name;
public DatabaseTable(String name) {
this.name = name;
}
public List<DatabaseColumn> getColumns() {
return columns;
}
public void setColumns(List<DatabaseColumn> columns) {
this.columns = columns;
}
public String getName() {
return name;
}
public void setName(String name) {
this.name = name;
}
@Override
public String toString() {
return "DatabaseTable [columns=" + columns + ", name=" + name + "]";
}
}

183
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@ -1,183 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.mysql;
import java.sql.Connection;
import java.sql.DriverManager;
import java.sql.SQLException;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.SQLType;
public class MySQLConnectionManager {
private static final Logger logger = LoggerFactory.getLogger("MySQLConnectionManager");
private Connection connection;
private SQLType type;
private static MySQLConnectionManager instance;
/**
*
* @param type
* @param databaseConfiguration
* @throws SQLException
*/
private MySQLConnectionManager() {
type = SQLType.forName(MySQLDatabaseService.DB_NAME);
}
/**
* Create a new instance of this connection manager.
*
* @return an instance of the manager
*
* @throws DatabaseServiceException
*/
public static MySQLConnectionManager getInstance() throws DatabaseServiceException {
if (instance == null) {
logger.debug("::Creating new MySQLConnectionManager ::");
instance = new MySQLConnectionManager();
}
return instance;
}
/**
* Get the SQL Database type.
*
* @return the type
*/
public SQLType getType() {
return this.type;
}
/**
* testConnection
* @param databaseConfiguration
* @return
*/
public boolean testConnection(DatabaseConfiguration databaseConfiguration) throws DatabaseServiceException{
try {
boolean connResult = false;
Connection conn = getConnection(databaseConfiguration, true);
if(conn != null) {
connResult = true;
conn.close();
}
return connResult;
}
catch (SQLException e) {
logger.error("Test connection Failed!", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
/**
* Get a connection form the connection pool.
*
* @return connection from the pool
*/
public Connection getConnection(DatabaseConfiguration databaseConfiguration, boolean forceNewConnection) throws DatabaseServiceException{
try {
if (connection != null && !forceNewConnection) {
//logger.info("connection closed::{}", connection.isClosed());
if (!connection.isClosed()) {
if(logger.isDebugEnabled()){
logger.debug("Returning existing connection::{}", connection);
}
return connection;
}
}
String dbURL = getDatabaseUrl(databaseConfiguration);
Class.forName(type.getClassPath());
//logger.info("*** type.getClassPath() ::{}, {}**** ", type.getClassPath());
DriverManager.setLoginTimeout(10);
connection = DriverManager.getConnection(dbURL, databaseConfiguration.getDatabaseUser(),
databaseConfiguration.getDatabasePassword());
if(logger.isDebugEnabled()) {
logger.debug("*** Acquired New connection for ::{} **** ", dbURL);
}
return connection;
} catch (ClassNotFoundException e) {
logger.error("Jdbc Driver not found", e);
throw new DatabaseServiceException(e.getMessage());
} catch (SQLException e) {
logger.error("SQLException::Couldn't get a Connection!", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
public void shutdown() {
if (connection != null) {
try {
connection.close();
}
catch (SQLException e) {
logger.warn("Non-Managed connection could not be closed. Whoops!", e);
}
}
}
private String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName() + "?useSSL=" + dbConfig.isUseSSL();
}
}

341
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.mysql;
import java.sql.Connection;
import java.sql.ResultSet;
import java.sql.SQLException;
import java.sql.Statement;
import java.util.ArrayList;
import java.util.List;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.DatabaseUtils;
import com.google.refine.extension.database.SQLType;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseInfo;
import com.google.refine.extension.database.model.DatabaseRow;
//import com.mysql.jdbc.ResultSetMetaData;
public class MySQLDatabaseService extends DatabaseService {
private static final Logger logger = LoggerFactory.getLogger("MySQLDatabaseService");
public static final String DB_NAME = "mysql";
public static final String DB_DRIVER = "com.mysql.jdbc.Driver";
private static MySQLDatabaseService instance;
private MySQLDatabaseService() {
}
public static MySQLDatabaseService getInstance() {
if (instance == null) {
SQLType.registerSQLDriver(DB_NAME, DB_DRIVER, false);
instance = new MySQLDatabaseService();
if(logger.isDebugEnabled()) {
logger.debug("MySQLDatabaseService Instance: {}", instance);
}
}
return instance;
}
@Override
public boolean testConnection(DatabaseConfiguration dbConfig) throws DatabaseServiceException{
return MySQLConnectionManager.getInstance().testConnection(dbConfig);
}
@Override
public DatabaseInfo connect(DatabaseConfiguration dbConfig) throws DatabaseServiceException{
return getMetadata(dbConfig);
}
@Override
public DatabaseInfo executeQuery(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException{
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(dbConfig, false);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
java.sql.ResultSetMetaData metadata = queryResult.getMetaData();
if(metadata instanceof com.mysql.jdbc.ResultSetMetaData) {
metadata = (com.mysql.jdbc.ResultSetMetaData)metadata;
}
//ResultSetMetaData metadata = (ResultSetMetaData)queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
ArrayList<DatabaseColumn> columns = new ArrayList<DatabaseColumn>(columnCount);
for (int i = 1; i <= columnCount; i++) {
DatabaseColumn dc = new DatabaseColumn(
metadata.getColumnName(i),
metadata.getColumnLabel(i),
DatabaseUtils.getDbColumnType(metadata.getColumnType(i)),
metadata.getColumnDisplaySize(i));
columns.add(dc);
}
int index = 0;
List<DatabaseRow> rows = new ArrayList<DatabaseRow>();
while (queryResult.next()) {
DatabaseRow row = new DatabaseRow();
row.setIndex(index);
List<String> values = new ArrayList<String>(columnCount);
for (int i = 1; i <= columnCount; i++) {
values.add(queryResult.getString(i));
}
row.setValues(values);
rows.add(row);
index++;
}
DatabaseInfo dbInfo = new DatabaseInfo();
dbInfo.setColumns(columns);
dbInfo.setRows(rows);
return dbInfo;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}finally {
MySQLConnectionManager.getInstance().shutdown();
}
}
/**
*
* @param connectionInfo
* @return
* @throws DatabaseServiceException
*/
private DatabaseInfo getMetadata(DatabaseConfiguration connectionInfo) throws DatabaseServiceException {
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(connectionInfo, true);
if(connection != null) {
java.sql.DatabaseMetaData metadata;
metadata = connection.getMetaData();
int dbMajorVersion = metadata.getDatabaseMajorVersion();
int dbMinorVersion = metadata.getDatabaseMinorVersion();
String dbProductVersion = metadata.getDatabaseProductVersion();
String dbProductName = metadata.getDatabaseProductName();
DatabaseInfo dbInfo = new DatabaseInfo();
dbInfo.setDatabaseMajorVersion(dbMajorVersion);
dbInfo.setDatabaseMinorVersion(dbMinorVersion);
dbInfo.setDatabaseProductVersion(dbProductVersion);
dbInfo.setDatabaseProductName(dbProductName);
return dbInfo;
}
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
return null;
}
@Override
public String buildLimitQuery(Integer limit, Integer offset, String query) {
if(logger.isDebugEnabled()) {
logger.info( "<<< original input query::{} >>>" , query );
}
final int len = query.length();
String parsedQuery = len > 0 && query.endsWith(";") ? query.substring(0, len - 1) : query;
StringBuilder sb = new StringBuilder();
sb.append(parsedQuery);
if(limit != null) {
sb.append(" LIMIT" + " " + limit);
}
if(offset != null) {
sb.append(" OFFSET" + " " + offset);
}
sb.append(";");
String parsedQueryOut = sb.toString();
if(logger.isDebugEnabled()) {
logger.info( "<<<Final input query::{} >>>" , parsedQueryOut );
}
return parsedQueryOut;
}
@Override
public ArrayList<DatabaseColumn> getColumns(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException{
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(dbConfig, true);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
java.sql.ResultSetMetaData metadata = queryResult.getMetaData();
if(metadata instanceof com.mysql.jdbc.ResultSetMetaData) {
metadata = (com.mysql.jdbc.ResultSetMetaData)metadata;
}
//ResultSetMetaData metadata = (ResultSetMetaData) queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
ArrayList<DatabaseColumn> columns = new ArrayList<DatabaseColumn>(columnCount);
for (int i = 1; i <= columnCount; i++) {
DatabaseColumn dc = new DatabaseColumn(metadata.getColumnName(i), metadata.getColumnLabel(i),
DatabaseUtils.getDbColumnType(metadata.getColumnType(i)), metadata.getColumnDisplaySize(i));
columns.add(dc);
}
return columns;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
@Override
public List<DatabaseRow> getRows(DatabaseConfiguration dbConfig, String query)
throws DatabaseServiceException {
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(dbConfig, false);
Statement statement = connection.createStatement();
statement.setFetchSize(10);
ResultSet queryResult = statement.executeQuery(query);
java.sql.ResultSetMetaData metadata = queryResult.getMetaData();
if(metadata instanceof com.mysql.jdbc.ResultSetMetaData) {
metadata = (com.mysql.jdbc.ResultSetMetaData)metadata;
}
//logger.info("metadata class::" + metadata.getClass());
int columnCount = metadata.getColumnCount();
int index = 0;
List<DatabaseRow> rows = new ArrayList<DatabaseRow>();
while (queryResult.next()) {
DatabaseRow row = new DatabaseRow();
row.setIndex(index);
List<String> values = new ArrayList<String>(columnCount);
for (int i = 1; i <= columnCount; i++) {
values.add(queryResult.getString(i));
}
row.setValues(values);
rows.add(row);
index++;
}
return rows;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
@Override
protected String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName() + "?useSSL=" + dbConfig.isUseSSL();
}
@Override
public Connection getConnection(DatabaseConfiguration dbConfig)
throws DatabaseServiceException {
// TODO Auto-generated method stub
return MySQLConnectionManager.getInstance().getConnection(dbConfig, true);
}
@Override
public DatabaseInfo testQuery(DatabaseConfiguration dbConfig, String query)
throws DatabaseServiceException {
Statement statement = null;
ResultSet queryResult = null;
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(dbConfig, true);
statement = connection.createStatement();
queryResult = statement.executeQuery(query);
DatabaseInfo dbInfo = new DatabaseInfo();
return dbInfo;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
} finally {
try {
if (queryResult != null) {
queryResult.close();
}
if (statement != null) {
statement.close();
}
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
MySQLConnectionManager.getInstance().shutdown();
}
}
}

185
extensions/database/src/com/google/refine/extension/database/pgsql/PgSQLConnectionManager.java
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/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.pgsql;
import java.sql.Connection;
import java.sql.DriverManager;
import java.sql.SQLException;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.SQLType;
public class PgSQLConnectionManager {
private static final Logger logger = LoggerFactory.getLogger("PgSQLConnectionManager");
private Connection connection;
private SQLType type;
private static PgSQLConnectionManager instance;
/**
*
* @param type
* @param databaseConfiguration
* @throws SQLException
*/
private PgSQLConnectionManager() {
type = SQLType.forName(PgSQLDatabaseService.DB_NAME);
}
/**
* Create a new instance of this connection manager.
*
* @return an instance of the manager
*
* @throws DatabaseServiceException
*/
public static PgSQLConnectionManager getInstance() throws DatabaseServiceException {
if (instance == null) {
if(logger.isDebugEnabled()) {
logger.debug("::Creating new PgSQL ConnectionManager ::");
}
instance = new PgSQLConnectionManager();
}
return instance;
}
/**
* Get the SQL Database type.
*
* @return the type
*/
public SQLType getType() {
return this.type;
}
/**
* testConnection
* @param databaseConfiguration
* @return
*/
public boolean testConnection(DatabaseConfiguration databaseConfiguration) throws DatabaseServiceException{
try {
boolean connResult = false;
Connection conn = getConnection(databaseConfiguration, true);
if(conn != null) {
connResult = true;
conn.close();
}
return connResult;
}
catch (SQLException e) {
logger.error("Test connection Failed!", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
/**
* Get a connection form the connection pool.
*
* @return connection from the pool
*/
public Connection getConnection(DatabaseConfiguration databaseConfiguration, boolean forceNewConnection) throws DatabaseServiceException{
try {
// logger.info("connection::{}, forceNewConnection: {}", connection, forceNewConnection);
if (connection != null && !forceNewConnection) {
// logger.info("connection closed::{}", connection.isClosed());
if (!connection.isClosed()) {
if(logger.isDebugEnabled()){
logger.debug("Returning existing connection::{}", connection);
}
return connection;
}
}
Class.forName(type.getClassPath());
DriverManager.setLoginTimeout(10);
String dbURL = getDatabaseUrl(databaseConfiguration);
connection = DriverManager.getConnection(dbURL, databaseConfiguration.getDatabaseUser(),
databaseConfiguration.getDatabasePassword());
logger.debug("*** Acquired New connection for ::{} **** ", dbURL);
return connection;
} catch (ClassNotFoundException e) {
logger.error("Jdbc Driver not found", e);
throw new DatabaseServiceException(e.getMessage());
} catch (SQLException e) {
logger.error("SQLException::Couldn't get a Connection!", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
public void shutdown() {
if (connection != null) {
try {
connection.close();
}
catch (SQLException e) {
logger.warn("Non-Managed connection could not be closed. Whoops!", e);
}
}
}
private static String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType().toLowerCase() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName();
}
}

321
extensions/database/src/com/google/refine/extension/database/pgsql/PgSQLDatabaseService.java
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@ -1,321 +0,0 @@
/*
* Copyright (c) 2017, Tony Opara
* All rights reserved.
*
* Redistribution and use in source and binary forms, with or without
* modification, are permitted provided that the following conditions are met:
* - Redistributions of source code must retain the above copyright notice, this
* list of conditions and the following disclaimer.
* - Redistributions in binary form must reproduce the above copyright notice,
* this list of conditions and the following disclaimer in the documentation
* and/or other materials provided with the distribution.
*
* Neither the name of Google nor the names of its contributors may be used to
* endorse or promote products derived from this software without specific
* prior written permission.
*
* THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS"
* AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO,
* THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR
* PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR
* CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL,
* EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO,
* PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS;
* OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY,
* WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR
* OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF
* ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database.pgsql;
import java.sql.Connection;
import java.sql.ResultSet;
import java.sql.SQLException;
import java.sql.Statement;
import java.util.ArrayList;
import java.util.List;
import org.postgresql.jdbc.PgResultSetMetaData;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.DatabaseUtils;
import com.google.refine.extension.database.SQLType;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseInfo;
import com.google.refine.extension.database.model.DatabaseRow;
import com.google.refine.extension.database.mysql.MySQLConnectionManager;
public class PgSQLDatabaseService extends DatabaseService {
private static final Logger logger = LoggerFactory.getLogger("PgSQLDatabaseService");
public static final String DB_NAME = "postgresql";
public static final String DB_DRIVER = "org.postgresql.Driver";
private static PgSQLDatabaseService instance;
private PgSQLDatabaseService() {
}
public static PgSQLDatabaseService getInstance() {
if (instance == null) {
SQLType.registerSQLDriver(DB_NAME, DB_DRIVER);
instance = new PgSQLDatabaseService();
if(logger.isDebugEnabled()) {
logger.debug("PgSQLDatabaseService Instance: {}", instance);
}
}
return instance;
}
@Override
public boolean testConnection(DatabaseConfiguration dbConfig) throws DatabaseServiceException{
return PgSQLConnectionManager.getInstance().testConnection(dbConfig);
}
@Override
public DatabaseInfo connect(DatabaseConfiguration dbConfig) throws DatabaseServiceException{
return getMetadata(dbConfig);
}
@Override
public DatabaseInfo executeQuery(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException{
try {
Connection connection = PgSQLConnectionManager.getInstance().getConnection(dbConfig, false);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
PgResultSetMetaData metadata = (PgResultSetMetaData)queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
ArrayList<DatabaseColumn> columns = new ArrayList<DatabaseColumn>(columnCount);
for (int i = 1; i <= columnCount; i++) {
DatabaseColumn dc = new DatabaseColumn(
metadata.getColumnName(i),
metadata.getColumnLabel(i),
DatabaseUtils.getDbColumnType(metadata.getColumnType(i)),
metadata.getColumnDisplaySize(i));
columns.add(dc);
}
int index = 0;
List<DatabaseRow> rows = new ArrayList<DatabaseRow>();
while (queryResult.next()) {
DatabaseRow row = new DatabaseRow();
row.setIndex(index);
List<String> values = new ArrayList<String>(columnCount);
for (int i = 1; i <= columnCount; i++) {
values.add(queryResult.getString(i));
}
row.setValues(values);
rows.add(row);
index++;
}
DatabaseInfo dbInfo = new DatabaseInfo();
dbInfo.setColumns(columns);
dbInfo.setRows(rows);
return dbInfo;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}finally {
PgSQLConnectionManager.getInstance().shutdown();
}
}
/**
*
* @param connectionInfo
* @return
* @throws DatabaseServiceException
*/
private DatabaseInfo getMetadata(DatabaseConfiguration connectionInfo) throws DatabaseServiceException {
try {
Connection connection = PgSQLConnectionManager.getInstance().getConnection(connectionInfo, true);
if(connection != null) {
java.sql.DatabaseMetaData metadata;
metadata = connection.getMetaData();
int dbMajorVersion = metadata.getDatabaseMajorVersion();
int dbMinorVersion = metadata.getDatabaseMinorVersion();
String dbProductVersion = metadata.getDatabaseProductVersion();
String dbProductName = metadata.getDatabaseProductName();
DatabaseInfo dbInfo = new DatabaseInfo();
dbInfo.setDatabaseMajorVersion(dbMajorVersion);
dbInfo.setDatabaseMinorVersion(dbMinorVersion);
dbInfo.setDatabaseProductVersion(dbProductVersion);
dbInfo.setDatabaseProductName(dbProductName);
return dbInfo;
}
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
return null;
}
@Override
public String buildLimitQuery(Integer limit, Integer offset, String query) {
if(logger.isDebugEnabled()) {
logger.debug( "<<< original input query::{} >>>" , query );
}
final int len = query.length();
String parsedQuery = len > 0 && query.endsWith(";") ? query.substring(0, len - 1) : query;
StringBuilder sb = new StringBuilder();
sb.append(parsedQuery);
if(limit != null) {
sb.append(" LIMIT" + " " + limit);
}
if(offset != null) {
sb.append(" OFFSET" + " " + offset);
}
sb.append(";");
String parsedQueryOut = sb.toString();
if(logger.isDebugEnabled()) {
logger.debug( "<<<Final input query::{} >>>" , parsedQueryOut );
}
return parsedQueryOut;
}
@Override
public ArrayList<DatabaseColumn> getColumns(DatabaseConfiguration dbConfig, String query) throws DatabaseServiceException{
try {
Connection connection = PgSQLConnectionManager.getInstance().getConnection(dbConfig, true);
Statement statement = connection.createStatement();
ResultSet queryResult = statement.executeQuery(query);
PgResultSetMetaData metadata = (PgResultSetMetaData) queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
ArrayList<DatabaseColumn> columns = new ArrayList<DatabaseColumn>(columnCount);
for (int i = 1; i <= columnCount; i++) {
DatabaseColumn dc = new DatabaseColumn(metadata.getColumnName(i), metadata.getColumnLabel(i),
DatabaseUtils.getDbColumnType(metadata.getColumnType(i)), metadata.getColumnDisplaySize(i));
columns.add(dc);
}
return columns;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
@Override
public List<DatabaseRow> getRows(DatabaseConfiguration dbConfig, String query)
throws DatabaseServiceException {
try {
Connection connection = PgSQLConnectionManager.getInstance().getConnection(dbConfig, false);
Statement statement = connection.createStatement();
statement.setFetchSize(10);
ResultSet queryResult = statement.executeQuery(query);
PgResultSetMetaData metadata = (PgResultSetMetaData)queryResult.getMetaData();
int columnCount = metadata.getColumnCount();
int index = 0;
List<DatabaseRow> rows = new ArrayList<DatabaseRow>();
while (queryResult.next()) {
DatabaseRow row = new DatabaseRow();
row.setIndex(index);
List<String> values = new ArrayList<String>(columnCount);
for (int i = 1; i <= columnCount; i++) {
values.add(queryResult.getString(i));
}
row.setValues(values);
rows.add(row);
index++;
}
return rows;
} catch (SQLException e) {
logger.error("SQLException::{}::{}", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
}
}
@Override
protected String getDatabaseUrl(DatabaseConfiguration dbConfig) {
int port = dbConfig.getDatabasePort();
return "jdbc:" + dbConfig.getDatabaseType() + "://" + dbConfig.getDatabaseHost()
+ ((port == 0) ? "" : (":" + port)) + "/" + dbConfig.getDatabaseName() + "?useSSL=" + dbConfig.isUseSSL();
}
@Override
public Connection getConnection(DatabaseConfiguration dbConfig)
throws DatabaseServiceException {
return PgSQLConnectionManager.getInstance().getConnection(dbConfig, true);
}
@Override
public DatabaseInfo testQuery(DatabaseConfiguration dbConfig, String query)
throws DatabaseServiceException {
Statement statement = null;
ResultSet queryResult = null;
try {
Connection connection = MySQLConnectionManager.getInstance().getConnection(dbConfig, true);
statement = connection.createStatement();
queryResult = statement.executeQuery(query);
DatabaseInfo dbInfo = new DatabaseInfo();
return dbInfo;
} catch (SQLException e) {
logger.error("SQLException::", e);
throw new DatabaseServiceException(true, e.getSQLState(), e.getErrorCode(), e.getMessage());
} finally {
try {
if (queryResult != null) {
queryResult.close();
}
if (statement != null) {
statement.close();
}
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
//MySQLConnectionManager.getInstance().shutdown();
}
}
}

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extensions/database/test/com/google/refine/extension/database/DBExtensionTestUtils.java
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@ -1,456 +0,0 @@
package com.google.refine.extension.database;
import java.io.File;
import java.io.IOException;
import java.sql.Connection;
import java.sql.DatabaseMetaData;
import java.sql.Date;
import java.sql.PreparedStatement;
import java.sql.ResultSet;
import java.sql.SQLException;
import java.sql.Statement;
import java.util.HashMap;
import java.util.Map;
import java.util.Random;
import org.apache.commons.lang.text.StrSubstitutor;
import org.slf4j.Logger;
import org.slf4j.LoggerFactory;
public class DBExtensionTestUtils {
private static final Logger logger = LoggerFactory.getLogger("DBExtensionTestUtils");
private static final String MYSQL_DB_NAME = "mysql";
private static final String DEFAULT_MYSQL_HOST = "127.0.0.1";
private static final int DEFAULT_MYSQL_PORT = 3306;
private static final String DEFAULT_MYSQL_USER = "root";
private static final String DEFAULT_MYSQL_PASSWORD = "secret";
private static final String DEFAULT_MYSQL_DB_NAME = "testdb";
private static final String PGSQL_DB_NAME = "postgresql";
private static final String DEFAULT_PGSQL_HOST = "127.0.0.1";
private static final int DEFAULT_PGSQL_PORT = 5432;
private static final String DEFAULT_PGSQL_USER = "postgres";
private static final String DEFAULT_PGSQL_PASSWORD = "";
private static final String DEFAULT_PGSQL_DB_NAME = "openrefine";
private static final String DEFAULT_TEST_TABLE = "test_data";
private static final int SAMPLE_SIZE = 500000;
private static final int BATCH_SIZE = 1000;
private static Random rand = new Random();
private Map<Integer, Integer> mncMap;
private Map<Integer, Integer> mccMap;
/**
* Create Test Table with one row of Data
* @param dbConfig DatabaseConfiguration to test
* @param tableName
*/
public static void initTestData(DatabaseConfiguration dbConfig, String tableName) {
Statement stmt = null;
Connection conn = null;
try {
DatabaseService dbService = DatabaseService.get(dbConfig.getDatabaseType());
conn = dbService.getConnection(dbConfig);
stmt = conn.createStatement();
DatabaseMetaData dbm = conn.getMetaData();
// check if "employee" table is there
ResultSet tables = dbm.getTables(null, null, tableName, null);
if (tables.next()) {
stmt.executeUpdate("DROP TABLE " + tableName);
//System.out.println("Drop Table Result::" + dropResult);
}
String createSQL = " CREATE TABLE " + tableName + " ( "
+ " ID INT NOT NULL, "
+ " NAME VARCHAR (20) NOT NULL, "
+ " CITY VARCHAR (20) NOT NULL,"
+ " PRIMARY KEY (ID) );";
stmt.executeUpdate(createSQL);
//System.out.println("Create Table Result::" + createResult);
String insertTableSQL = "INSERT INTO " + tableName
+ "(ID, NAME, CITY) " + "VALUES"
+ "(1,'frank lens','Dallas')";
stmt.executeUpdate(insertTableSQL);
// System.out.println("Insert Data Result::" + insertResult);
logger.info("Database Test Init Data Created!!!");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
} finally {
if(stmt != null) {
try {
stmt.close();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
if(conn != null) {
try {
conn.close();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}
}
public static void initTestData(DatabaseConfiguration dbConfig) {
Statement stmt = null;
Connection conn = null;
try {
DatabaseService dbService = DatabaseService.get(dbConfig.getDatabaseType());
conn = dbService.getConnection(dbConfig);
stmt = conn.createStatement();
DatabaseMetaData dbm = conn.getMetaData();
// check if "employee" table is there
ResultSet tables = dbm.getTables(null, null, DEFAULT_TEST_TABLE, null);
if (tables.next()) {
stmt.executeUpdate("DROP TABLE " + DEFAULT_TEST_TABLE);
//System.out.println("Drop Table Result::" + dropResult);
}
String createSQL = " CREATE TABLE TEST_DATA( "
+ " ID INT NOT NULL, "
+ " NAME VARCHAR (20) NOT NULL, "
+ " CITY VARCHAR (20) NOT NULL,"
+ " PRIMARY KEY (ID) );";
stmt.executeUpdate(createSQL);
//System.out.println("Create Table Result::" + createResult);
String insertTableSQL = "INSERT INTO TEST_DATA"
+ "(ID, NAME, CITY) " + "VALUES"
+ "(1,'frank lens','Dallas')";
stmt.executeUpdate(insertTableSQL);
// System.out.println("Insert Data Result::" + insertResult);
logger.info("Database Test Init Data Created!!!");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
} finally {
if(stmt != null) {
try {
stmt.close();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
if(conn != null) {
try {
conn.close();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}
}
/**
* CREATE test data in MySQL
* Table name: test_data
* @param sampleSize
* @param batchSize
*/
public void generateMySQLTestData(int sampleSize, int batchSize) {
mncMap = new HashMap<Integer, Integer>();
mccMap = new HashMap<Integer, Integer>();
mccMap.put(0, 302);
mccMap.put(1, 311);
mccMap.put(2, 730);
mccMap.put(1, 622);
mncMap.put(0, 006);
mncMap.put(1, 140);
mncMap.put(2, 380);
mncMap.put(3, 710);
DatabaseConfiguration dc = new DatabaseConfiguration();
dc.setDatabaseHost(DEFAULT_MYSQL_HOST);
dc.setDatabaseName(DEFAULT_MYSQL_DB_NAME);
dc.setDatabasePassword(DEFAULT_MYSQL_PASSWORD);
dc.setDatabasePort(DEFAULT_MYSQL_PORT);
dc.setDatabaseType(MYSQL_DB_NAME);
dc.setDatabaseUser(DEFAULT_MYSQL_USER);
dc.setUseSSL(false);
String truncateTableSQL = "TRUNCATE test_data";
String insertTableSQL = "INSERT INTO test_data("
+ "id, ue_id, start_time, end_date, bytes_upload, bytes_download, cell_id, mcc, mnc, lac, imei)"
+ " VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?);";
Connection conn;
try {
conn = DatabaseService.get(MYSQL_DB_NAME).getConnection(dc);
Statement truncateStmt = conn.createStatement();
int result = truncateStmt.executeUpdate(truncateTableSQL);
System.out.println("Truncate Table Result::" + result);
truncateStmt.close();
conn.setAutoCommit(false);
PreparedStatement stmt = conn.prepareStatement(insertTableSQL);
int counter=1;
for (int i = 0; i < sampleSize; i++) {
stmt.setLong(1, i);
stmt.setString(2, getNextUeId());
stmt.setDate(3, getNextStartDate());
stmt.setDate(4, getNextEndDate());
stmt.setInt(5, rand.nextInt());
stmt.setInt(6, rand.nextInt());
stmt.setInt(7, rand.nextInt(10));
stmt.setInt(8, getMCC());
stmt.setInt(9, getMNC());
stmt.setInt(10, rand.nextInt(100));
stmt.setString(11, getNextIMEI());
stmt.addBatch();
//Execute batch of 1000 records
if(i%batchSize==0){
stmt.executeBatch();
conn.commit();
System.out.println("Batch "+(counter++)+" executed successfully");
}
}
//execute final batch
stmt.executeBatch();
System.out.println("Final Batch Executed "+(counter++)+" executed successfully");
conn.commit();
conn.close();
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
/**
*
* @param sampleSize
* @param batchSize
*/
public void generatePgSQLTestData(int sampleSize, int batchSize) {
mncMap = new HashMap<Integer, Integer>();
mccMap = new HashMap<Integer, Integer>();
mccMap.put(0, 302);
mccMap.put(1, 311);
mccMap.put(2, 730);
mccMap.put(1, 622);
mncMap.put(0, 006);
mncMap.put(1, 140);
mncMap.put(2, 380);
mncMap.put(3, 710);
DatabaseConfiguration dc = new DatabaseConfiguration();
dc.setDatabaseHost(DEFAULT_PGSQL_HOST);
dc.setDatabaseName(DEFAULT_PGSQL_DB_NAME);
dc.setDatabasePassword(DEFAULT_PGSQL_PASSWORD);
dc.setDatabasePort(DEFAULT_PGSQL_PORT);
dc.setDatabaseType(PGSQL_DB_NAME);
dc.setDatabaseUser(DEFAULT_PGSQL_USER);
dc.setUseSSL(false);
String truncateTableSQL = "TRUNCATE public.test_data";
String insertTableSQL = "INSERT INTO public.test_data("
+ "id, ue_id, start_time, end_date, bytes_upload, bytes_download, cell_id, mcc, mnc, lac, imei)"
+ " VALUES (?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?);";
Connection conn;
try {
conn = DatabaseService.get(PGSQL_DB_NAME).getConnection(dc);
Statement truncateStmt = conn.createStatement();
int result = truncateStmt.executeUpdate(truncateTableSQL);
System.out.println("Truncate Table Result::" + result);
truncateStmt.close();
conn.setAutoCommit(false);
PreparedStatement stmt = conn.prepareStatement(insertTableSQL);
int counter=1;
for (int i = 0; i < sampleSize; i++) {
stmt.setLong(1, i);
stmt.setString(2, getNextUeId());
stmt.setDate(3, getNextStartDate());
stmt.setDate(4, getNextEndDate());
stmt.setInt(5, rand.nextInt());
stmt.setInt(6, rand.nextInt());
stmt.setInt(7, rand.nextInt(10));
stmt.setInt(8, getMCC());
stmt.setInt(9, getMNC());
stmt.setInt(10, rand.nextInt(100));
stmt.setString(11, getNextIMEI());
stmt.addBatch();
//Execute batch of 1000 records
if(i%batchSize==0){
stmt.executeBatch();
conn.commit();
System.out.println("Batch "+(counter++)+" executed successfully");
}
}
//execute final batch
stmt.executeBatch();
System.out.println("Final Batch Executed "+(counter++)+" executed successfully");
conn.commit();
conn.close();
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
private String getNextIMEI() {
int n = 1000000000 + rand.nextInt(900000000);
return "" + n;
}
private int getMNC() {
return mncMap.get(rand.nextInt(3));
}
private int getMCC() {
return mccMap.get(rand.nextInt(3));
}
private Date getNextEndDate() {
return new Date(System.currentTimeMillis() + 1);
}
private Date getNextStartDate() {
return new Date(System.currentTimeMillis());
}
private String getNextUeId() {
int n = 300000000 + rand.nextInt(900000000);
return "" + n;
}
public static void main(String[] args) {
DBExtensionTestUtils testUtil = new DBExtensionTestUtils();
testUtil.generatePgSQLTestData(SAMPLE_SIZE, BATCH_SIZE);
// testUtil.generateMySQLTestData();
}
public static void cleanUpTestData(DatabaseConfiguration dbConfig) {
Statement stmt = null;
Connection conn = null;
try {
DatabaseService dbService = DatabaseService.get(dbConfig.getDatabaseType());
conn = dbService.getConnection(dbConfig);
stmt = conn.createStatement();
DatabaseMetaData dbm = conn.getMetaData();
// check if "employee" table is there
ResultSet tables = dbm.getTables(null, null, DEFAULT_TEST_TABLE, null);
if (tables.next()) {
stmt.executeUpdate("DROP TABLE " + DEFAULT_TEST_TABLE);
//System.out.println("Drop Table Result::" + dropResult);
}
logger.info("Database Test Cleanup Done!!!");
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
} finally {
if(stmt != null) {
try {
stmt.close();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
if(conn != null) {
try {
conn.close();
} catch (SQLException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}
}
public static File createTempDirectory(String name)
throws IOException {
File dir = File.createTempFile(name, "");
dir.delete();
dir.mkdir();
return dir;
}
public static String getJDBCUrl(DatabaseConfiguration dbConfig) {
Map<String, Object> substitutes = new HashMap<String, Object>();
substitutes.put("dbType", dbConfig.getDatabaseType());
substitutes.put("host", dbConfig.getDatabaseHost());
substitutes.put("port", "" + dbConfig.getDatabasePort());
substitutes.put("dbName", dbConfig.getDatabaseName());
substitutes.put("useSSL", dbConfig.isUseSSL());
String urlTemplate = "jdbc:${dbType}://${host}:${port}/${dbName}?useSSL=${useSSL}";
StrSubstitutor strSub = new StrSubstitutor(substitutes);
return strSub.replace(urlTemplate);
}
}

73
extensions/database/test/com/google/refine/extension/database/DBExtensionTests.java
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@ -1,73 +0,0 @@
/*
Copyright 2010,2011 Google Inc.
All rights reserved.
Redistribution and use in source and binary forms, with or without
modification, are permitted provided that the following conditions are
met:
* Redistributions of source code must retain the above copyright
notice, this list of conditions and the following disclaimer.
* Redistributions in binary form must reproduce the above
copyright notice, this list of conditions and the following disclaimer
in the documentation and/or other materials provided with the
distribution.
* Neither the name of Google Inc. nor the names of its
contributors may be used to endorse or promote products derived from
this software without specific prior written permission.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS
"AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT
LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR
A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT
OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL,
SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT
LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE,
DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY
THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE
OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
*/
package com.google.refine.extension.database;
import org.slf4j.Logger;
public class DBExtensionTests {
protected final String MYSQL_DB_NAME = "mysql";
protected final String DEFAULT_MYSQL_HOST = "127.0.0.1";
protected final String DEFAULT_MYSQL_PORT = "3306";
protected final String DEFAULT_MYSQL_USER = "root";
protected final String DEFAULT_MYSQL_PASSWORD = "secret";
protected final String DEFAULT_MYSQL_DB_NAME = "testdb";
protected final String PGSQL_DB_NAME = "postgresql";
protected final String DEFAULT_PGSQL_HOST = "127.0.0.1";
protected final String DEFAULT_PGSQL_PORT = "5432";
protected final String DEFAULT_PGSQL_USER = "postgres";
protected final String DEFAULT_PGSQL_PASSWORD = "";
protected final String DEFAULT_PGSQL_DB_NAME = "testdb";
protected final String MARIA_DB_NAME = "mariadb";
protected final String DEFAULT_MARIADB_HOST = "127.0.0.1";
protected final String DEFAULT_MARIADB_PORT = "3306";
protected final String DEFAULT_MARIADB_USER = "root";
protected final String DEFAULT_MARIADB_PASSWORD = "secret";
protected final String DEFAULT_MARIADB_NAME = "testdb";
protected final String DEFAULT_TEST_TABLE = "test_data";
protected Logger logger;
// @BeforeSuite
// public void init() {
// System.out.println("Log4j init...");
// System.setProperty("log4j.configuration", "log4j-test.properties");
// }
}

285
extensions/database/test/com/google/refine/extension/database/DatabaseImportControllerTest.java
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@ -1,285 +0,0 @@
package com.google.refine.extension.database;
import static org.mockito.Mockito.when;
import java.io.File;
import java.io.IOException;
import java.io.PrintWriter;
import java.io.StringWriter;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONException;
import org.json.JSONObject;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.AfterMethod;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.ProjectManager;
import com.google.refine.ProjectMetadata;
import com.google.refine.RefineServlet;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
import com.google.refine.extension.database.stub.RefineDbServletStub;
import com.google.refine.importing.ImportingJob;
import com.google.refine.importing.ImportingManager;
import com.google.refine.io.FileProjectManager;
import com.google.refine.model.Project;
public class DatabaseImportControllerTest extends DBExtensionTests{
@Mock
private HttpServletRequest request;
@Mock
private HttpServletResponse response;
private Project project;
private ProjectMetadata metadata;
private ImportingJob job;
private RefineServlet servlet;
private String JSON_OPTION = "{\"mode\":\"row-based\"}}";
private DatabaseConfiguration testDbConfig;
private String query;
//System under test
private DatabaseImportController SUT = null;
@BeforeMethod
public void setUp() throws JSONException, IOException {
MockitoAnnotations.initMocks(this);
File dir = DBExtensionTestUtils.createTempDirectory("OR_DBExtension_Test_WorkspaceDir");
FileProjectManager.initialize(dir);
servlet = new RefineDbServletStub();
ImportingManager.initialize(servlet);
project = new Project();
metadata = new ProjectMetadata();
job = ImportingManager.createJob();
metadata.setName("Database Import Test Project");
ProjectManager.singleton.registerProject(project, metadata);
SUT = new DatabaseImportController();
}
@AfterMethod
public void tearDown() {
SUT = null;
request = null;
response = null;
project = null;
metadata = null;
ImportingManager.disposeJob(job.id);
job = null;
//options = null;
}
@Test
public void testDoGet() {
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
SUT.doGet(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String code = json.getString("status");
String message = json.getString("message");
Assert.assertNotNull(code);
Assert.assertNotNull(message);
Assert.assertEquals(code, "error");
Assert.assertEquals(message, "GET not implemented");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoPostInvalidSubCommand() {
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(request.getQueryString()).thenReturn(
"http://127.0.0.1:3333/command/core/importing-controller?controller=database/database-import-controller&subCommand=invalid-sub-command");
when(response.getWriter()).thenReturn(pw);
//test
SUT.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String code = json.getString("status");
String message = json.getString("message");
Assert.assertNotNull(code);
Assert.assertNotNull(message);
Assert.assertEquals(code, "error");
Assert.assertEquals(message, "No such sub command");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoPostInitializeParser() {
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(request.getQueryString()).thenReturn(
"http://127.0.0.1:3333/command/core/importing-controller?controller=database/database-import-controller&subCommand=initialize-parser-ui");
when(response.getWriter()).thenReturn(pw);
SUT.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String status = json.getString("status");
//System.out.println("json::" + json);
Assert.assertEquals(status, "ok");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoPostParsePreview() {
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
long jobId = job.id;
when(request.getQueryString()).thenReturn(
"http://127.0.0.1:3333/command/core/importing-controller?controller=database%2Fdatabase-import-controller&jobID="
+ jobId + "&subCommand=parse-preview");
when(response.getWriter()).thenReturn(pw);
when(request.getParameter("databaseType")).thenReturn(testDbConfig.getDatabaseType());
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
when(request.getParameter("query")).thenReturn(query);
when(request.getParameter("options")).thenReturn(JSON_OPTION);
SUT.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String status = json.getString("status");
//System.out.println("json::" + json);
Assert.assertEquals(status, "ok");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoPostCreateProject() {
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
long jobId = job.id;
when(request.getQueryString()).thenReturn(
"http://127.0.0.1:3333/command/core/importing-controller?controller=database%2Fdatabase-import-controller&jobID="
+ jobId + "&subCommand=create-project");
when(response.getWriter()).thenReturn(pw);
when(request.getParameter("databaseType")).thenReturn(testDbConfig.getDatabaseType());
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
when(request.getParameter("query")).thenReturn(query);
when(request.getParameter("options")).thenReturn(JSON_OPTION);
SUT.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String status = json.getString("status");
//System.out.println("json::" + json);
Assert.assertEquals(status, "ok");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(
@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
query = "SELECT count(*) FROM " + mySqlTestTable;
//testTable = mySqlTestTable;
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
}
}

200
extensions/database/test/com/google/refine/extension/database/DatabaseServiceTest.java
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@ -1,200 +0,0 @@
package com.google.refine.extension.database;
import java.sql.Connection;
import java.util.List;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.mariadb.MariaDBDatabaseService;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseInfo;
import com.google.refine.extension.database.model.DatabaseRow;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
import com.google.refine.extension.database.pgsql.PgSQLDatabaseService;
public class DatabaseServiceTest extends DBExtensionTests{
private DatabaseConfiguration testDbConfig;
private String testTable;
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
testTable = mySqlTestTable;
// DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MariaDBDatabaseService.DB_NAME, MariaDBDatabaseService.getInstance());
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
DatabaseService.DBType.registerDatabase(PgSQLDatabaseService.DB_NAME, PgSQLDatabaseService.getInstance());
}
@Test
public void testGetDatabaseUrl() {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
String dbUrl = dbService.getDatabaseUrl(testDbConfig);
Assert.assertNotNull(dbUrl);
Assert.assertEquals(dbUrl, DBExtensionTestUtils.getJDBCUrl(testDbConfig));
}
@Test
public void testGetPgSQLDBService() {
DatabaseService dbService = DatabaseService.get(PgSQLDatabaseService.DB_NAME);
Assert.assertNotNull(dbService);
Assert.assertEquals(dbService.getClass(), PgSQLDatabaseService.class);
}
@Test
public void testGetMySQLDBService() {
DatabaseService dbService = DatabaseService.get(MySQLDatabaseService.DB_NAME);
Assert.assertNotNull(dbService);
Assert.assertEquals(dbService.getClass(), MySQLDatabaseService.class);
}
@Test
public void testGetMariaDBSQLDBService() {
DatabaseService dbService = DatabaseService.get(MariaDBDatabaseService.DB_NAME);
Assert.assertNotNull(dbService);
Assert.assertEquals(dbService.getClass(), MariaDBDatabaseService.class);
}
@Test
public void testGetConnection() {
try {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
Connection conn = dbService.getConnection(testDbConfig);
Assert.assertNotNull(conn);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testTestConnection() {
try {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
boolean result = dbService.testConnection(testDbConfig);
Assert.assertEquals(result, true);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testConnect() {
try {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
DatabaseInfo databaseInfo = dbService.connect(testDbConfig);
Assert.assertNotNull(databaseInfo);
} catch (DatabaseServiceException e) {
e.printStackTrace();
}
}
@Test
public void testExecuteQuery() {
try {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
DatabaseInfo databaseInfo = dbService.testQuery(testDbConfig,
"SELECT * FROM " + testTable);
Assert.assertNotNull(databaseInfo);
} catch (DatabaseServiceException e) {
e.printStackTrace();
}
}
@Test
public void testBuildLimitQuery() {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
String limitQuery = dbService.buildLimitQuery(100, 0, "SELECT * FROM " + testTable);
Assert.assertNotNull(limitQuery);
Assert.assertEquals(limitQuery, "SELECT * FROM " + testTable + " LIMIT " + 100 + " OFFSET " + 0 + ";");
}
@Test
public void testGetColumns() {
List<DatabaseColumn> dbColumns;
try {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
dbColumns = dbService.getColumns(testDbConfig,"SELECT * FROM " + testTable);
Assert.assertNotNull(dbColumns);
int cols = dbColumns.size();
Assert.assertEquals(cols, 10);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testGetRows() {
try {
DatabaseService dbService = DatabaseService.get(testDbConfig.getDatabaseType());
List<DatabaseRow> dbRows = dbService.getRows(testDbConfig,
"SELECT * FROM " + testTable);
Assert.assertNotNull(dbRows);
Assert.assertEquals(dbRows.size(), 1);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

78
extensions/database/test/com/google/refine/extension/database/DatabaseTestConfig.java
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@ -1,78 +0,0 @@
package com.google.refine.extension.database;
import org.testng.annotations.AfterSuite;
import org.testng.annotations.BeforeSuite;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import com.google.refine.extension.database.mariadb.MariaDBDatabaseService;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
import com.google.refine.extension.database.pgsql.PgSQLDatabaseService;
public class DatabaseTestConfig extends DBExtensionTests {
private DatabaseConfiguration mysqlDbConfig;
private DatabaseConfiguration pgsqlDbConfig;
private DatabaseConfiguration mariadbDbConfig;
@BeforeSuite
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable",
"pgSqlDbName", "pgSqlDbHost", "pgSqlDbPort", "pgSqlDbUser", "pgSqlDbPassword", "pgSqlTestTable",
"mariadbDbName", "mariadbDbHost", "mariadbDbPort", "mariadbyDbUser", "mariadbDbPassword", "mariadbTestTable"})
public void beforeSuite(
@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable,
@Optional(DEFAULT_PGSQL_DB_NAME) String pgSqlDbName, @Optional(DEFAULT_PGSQL_HOST) String pgSqlDbHost,
@Optional(DEFAULT_PGSQL_PORT) String pgSqlDbPort, @Optional(DEFAULT_PGSQL_USER) String pgSqlDbUser,
@Optional(DEFAULT_PGSQL_PASSWORD) String pgSqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String pgSqlTestTable,
@Optional(DEFAULT_MARIADB_NAME) String mariadbDbName, @Optional(DEFAULT_MARIADB_HOST) String mariadbDbHost,
@Optional(DEFAULT_MARIADB_PORT) String mariadbDbPort, @Optional(DEFAULT_MARIADB_USER) String mariadbyDbUser,
@Optional(DEFAULT_MARIADB_PASSWORD) String mariadbDbPassword, @Optional(DEFAULT_TEST_TABLE) String mariadbTestTable) {
//System.out.println("@BeforeSuite\n");
mysqlDbConfig = new DatabaseConfiguration();
mysqlDbConfig.setDatabaseHost(mySqlDbHost);
mysqlDbConfig.setDatabaseName(mySqlDbName);
mysqlDbConfig.setDatabasePassword(mySqlDbPassword);
mysqlDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
mysqlDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
mysqlDbConfig.setDatabaseUser(mySqlDbUser);
mysqlDbConfig.setUseSSL(false);
pgsqlDbConfig = new DatabaseConfiguration();
pgsqlDbConfig.setDatabaseHost(pgSqlDbHost);
pgsqlDbConfig.setDatabaseName(pgSqlDbName);
pgsqlDbConfig.setDatabasePassword(pgSqlDbPassword);
pgsqlDbConfig.setDatabasePort(Integer.parseInt(pgSqlDbPort));
pgsqlDbConfig.setDatabaseType(PgSQLDatabaseService.DB_NAME);
pgsqlDbConfig.setDatabaseUser(pgSqlDbUser);
pgsqlDbConfig.setUseSSL(false);
mariadbDbConfig = new DatabaseConfiguration();
mariadbDbConfig.setDatabaseHost(mariadbDbHost);
mariadbDbConfig.setDatabaseName(mariadbDbName);
mariadbDbConfig.setDatabasePassword(mariadbDbPassword);
mariadbDbConfig.setDatabasePort(Integer.parseInt(mariadbDbPort));
mariadbDbConfig.setDatabaseType(MariaDBDatabaseService.DB_NAME);
mariadbDbConfig.setDatabaseUser(mariadbyDbUser);
mariadbDbConfig.setUseSSL(false);
DBExtensionTestUtils.initTestData(mysqlDbConfig);
DBExtensionTestUtils.initTestData(pgsqlDbConfig);
DBExtensionTestUtils.initTestData(mariadbDbConfig);
}
@AfterSuite
public void afterSuite() {
// System.out.println("@AfterSuite");
DBExtensionTestUtils.cleanUpTestData(mysqlDbConfig);
DBExtensionTestUtils.cleanUpTestData(pgsqlDbConfig);
DBExtensionTestUtils.cleanUpTestData(mariadbDbConfig);
}
}

28
extensions/database/test/com/google/refine/extension/database/SimpleTextEncryptorTest.java
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@ -1,28 +0,0 @@
package com.google.refine.extension.database;
import org.testng.Assert;
import org.testng.annotations.Test;
public class SimpleTextEncryptorTest {
@Test
public void encrypt() {
SimpleTextEncryptor textEncryptor = new SimpleTextEncryptor("WEWssa!@d445d");
String password = "testpass";
String encPass = textEncryptor.encrypt(password);
Assert.assertNotNull(encPass);
Assert.assertNotEquals(encPass, password);
}
@Test
public void decrypt() {
SimpleTextEncryptor textEncryptor = new SimpleTextEncryptor("OOEWssa!@d445d");
String password = "testpass";
String encPass = textEncryptor.encrypt(password);
Assert.assertNotNull(encPass);
Assert.assertNotEquals(encPass, password);
String decPass = textEncryptor.decrypt(encPass);
Assert.assertEquals(decPass, password);
}
}

101
extensions/database/test/com/google/refine/extension/database/cmd/ConnectCommandTest.java
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@ -1,101 +0,0 @@
package com.google.refine.extension.database.cmd;
import static org.mockito.Mockito.when;
import java.io.PrintWriter;
import java.io.StringWriter;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONObject;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
public class ConnectCommandTest extends DBExtensionTests {
@Mock
private HttpServletRequest request;
@Mock
private HttpServletResponse response;
private DatabaseConfiguration testDbConfig;
// private String testTable;
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
//testTable = mySqlTestTable;
//DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
}
@Test
public void testDoPost() {
when(request.getParameter("databaseType")).thenReturn(MySQLDatabaseService.DB_NAME);
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
ConnectCommand connectCommand = new ConnectCommand();
connectCommand.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String code = json.getString("code");
Assert.assertEquals(code, "ok");
String databaseInfo = json.getString("databaseInfo");
Assert.assertNotNull(databaseInfo);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

100
extensions/database/test/com/google/refine/extension/database/cmd/ExecuteQueryCommandTest.java
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@ -1,100 +0,0 @@
package com.google.refine.extension.database.cmd;
import static org.mockito.Mockito.when;
import java.io.PrintWriter;
import java.io.StringWriter;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONObject;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
public class ExecuteQueryCommandTest extends DBExtensionTests {
@Mock
private HttpServletRequest request;
@Mock
private HttpServletResponse response;
private DatabaseConfiguration testDbConfig;
private String testTable;
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
testTable = mySqlTestTable;
// DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
}
@Test
public void testDoPost() {
when(request.getParameter("databaseType")).thenReturn(testDbConfig.getDatabaseType());
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
when(request.getParameter("queryString")).thenReturn("SELECT count(*) FROM " + testTable);
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
ExecuteQueryCommand executeQueryCommand = new ExecuteQueryCommand();
executeQueryCommand.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String code = json.getString("code");
Assert.assertEquals(code, "ok");
String queryResult = json.getString("QueryResult");
Assert.assertNotNull(queryResult);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

315
extensions/database/test/com/google/refine/extension/database/cmd/SavedConnectionCommandTest.java
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package com.google.refine.extension.database.cmd;
import static org.mockito.Mockito.when;
import java.io.File;
import java.io.IOException;
import java.io.PrintWriter;
import java.io.StringWriter;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONArray;
import org.json.JSONException;
import org.json.JSONObject;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.AfterMethod;
import org.testng.annotations.BeforeMethod;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.ProjectManager;
import com.google.refine.ProjectMetadata;
import com.google.refine.RefineServlet;
import com.google.refine.extension.database.DBExtensionTestUtils;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
import com.google.refine.extension.database.stub.RefineDbServletStub;
import com.google.refine.importing.ImportingManager;
import com.google.refine.io.FileProjectManager;
import com.google.refine.model.Project;
public class SavedConnectionCommandTest extends DBExtensionTests{
@Mock
private HttpServletRequest request;
@Mock
private HttpServletResponse response;
private DatabaseConfiguration testDbConfig;
private Project project;
private ProjectMetadata metadata;
//private ImportingJob job;
private RefineServlet servlet;
// private String JSON_OPTION = "{\"mode\":\"row-based\"}}";
//System under test
private SavedConnectionCommand SUT = null;
@BeforeMethod
public void setUp() throws JSONException, IOException {
MockitoAnnotations.initMocks(this);
File dir = DBExtensionTestUtils.createTempDirectory("OR_DBExtension_Test_WorkspaceDir");
FileProjectManager.initialize(dir);
servlet = new RefineDbServletStub();
ImportingManager.initialize(servlet);
project = new Project();
metadata = new ProjectMetadata();
//job = ImportingManager.createJob();
metadata.setName("Save DB Config Test Project");
ProjectManager.singleton.registerProject(project, metadata);
SUT = new SavedConnectionCommand();
}
@AfterMethod
public void tearDown() {
SUT = null;
request = null;
response = null;
project = null;
metadata = null;
// ImportingManager.disposeJob(job.id);
// job = null;
//options = null;
}
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
// MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
}
private void saveDatabaseConfiguration(String savedDbName) {
when(request.getParameter("connectionName")).thenReturn(savedDbName);
when(request.getParameter("databaseType")).thenReturn(MySQLDatabaseService.DB_NAME);
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
SUT.doPost(request, response);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoPost() {
when(request.getParameter("connectionName")).thenReturn("test-db-name");
when(request.getParameter("databaseType")).thenReturn(MySQLDatabaseService.DB_NAME);
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
SUT.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
JSONArray savedConnections = json.getJSONArray("savedConnections");
Assert.assertNotNull(savedConnections);
int len = savedConnections.length();
Assert.assertEquals(len, 1);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoGet() {
String testDbName = "testLocalDb";
//add saved connection
saveDatabaseConfiguration(testDbName);
when(request.getParameter("connectionName")).thenReturn(testDbName);
when(request.getParameter("databaseType")).thenReturn(MySQLDatabaseService.DB_NAME);
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
SUT.doGet(request, response);
JSONObject json = new JSONObject(sw.getBuffer().toString().trim());
JSONArray savedConnections = json.getJSONArray("savedConnections");
Assert.assertNotNull(savedConnections);
Assert.assertEquals(savedConnections.length(), 1);
JSONObject sc = (JSONObject)savedConnections.get(0);
// System.out.println("sc" + sc);
String connName = sc.getString("connectionName");
Assert.assertEquals(connName, testDbName);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoPut() {
String testDbName = "testLocalDb";
saveDatabaseConfiguration(testDbName);
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
//modify database config
String newHost = "localhost";
when(request.getParameter("connectionName")).thenReturn(testDbName);
when(request.getParameter("databaseType")).thenReturn(MySQLDatabaseService.DB_NAME);
when(request.getParameter("databaseServer")).thenReturn(newHost);
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
SUT.doPut(request, response);
JSONObject json = new JSONObject(sw.getBuffer().toString().trim());
JSONArray savedConnections = json.getJSONArray("savedConnections");
Assert.assertNotNull(savedConnections);
Assert.assertEquals(savedConnections.length(), 1);
JSONObject sc = (JSONObject)savedConnections.get(0);
System.out.println("sc" + sc);
String newDbHost = sc.getString("databaseHost");
Assert.assertEquals(newDbHost, newHost);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoDeleteValidConnectionName() {
String testDbName = "testLocalDb";
saveDatabaseConfiguration(testDbName);
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
when(request.getParameter("connectionName")).thenReturn(testDbName);
SUT.doDelete(request, response);
JSONObject json = new JSONObject(sw.getBuffer().toString().trim());
JSONArray savedConnections = json.getJSONArray("savedConnections");
Assert.assertNotNull(savedConnections);
Assert.assertEquals(savedConnections.length(), 0);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testDoDeleteInValidConnectionName() {
String testDbName = "testLocalDb";
saveDatabaseConfiguration(testDbName);
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
when(request.getParameter("connectionName")).thenReturn("noDbName");
SUT.doDelete(request, response);
// String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject();
Assert.assertNotNull(json);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

100
extensions/database/test/com/google/refine/extension/database/cmd/TestConnectCommandTest.java
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@ -1,100 +0,0 @@
package com.google.refine.extension.database.cmd;
import static org.mockito.Mockito.when;
import java.io.PrintWriter;
import java.io.StringWriter;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONObject;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
public class TestConnectCommandTest extends DBExtensionTests{
@Mock
private HttpServletRequest request;
@Mock
private HttpServletResponse response;
private DatabaseConfiguration testDbConfig;
// private String testTable;
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
//testTable = mySqlTestTable;
// DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
}
@Test
public void testDoPost() {
when(request.getParameter("databaseType")).thenReturn(MySQLDatabaseService.DB_NAME);
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
TestConnectCommand connectCommand = new TestConnectCommand();
connectCommand.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String code = json.getString("code");
Assert.assertEquals(code, "ok");
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

101
extensions/database/test/com/google/refine/extension/database/cmd/TestQueryCommandTest.java
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@ -1,101 +0,0 @@
package com.google.refine.extension.database.cmd;
import static org.mockito.Mockito.when;
import java.io.PrintWriter;
import java.io.StringWriter;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;
import org.json.JSONObject;
import org.mockito.Mock;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.mysql.MySQLDatabaseService;
public class TestQueryCommandTest extends DBExtensionTests {
@Mock
private HttpServletRequest request;
@Mock
private HttpServletResponse response;
private DatabaseConfiguration testDbConfig;
private String testTable;
@BeforeTest
@Parameters({ "mySqlDbName", "mySqlDbHost", "mySqlDbPort", "mySqlDbUser", "mySqlDbPassword", "mySqlTestTable"})
public void beforeTest(@Optional(DEFAULT_MYSQL_DB_NAME) String mySqlDbName, @Optional(DEFAULT_MYSQL_HOST) String mySqlDbHost,
@Optional(DEFAULT_MYSQL_PORT) String mySqlDbPort, @Optional(DEFAULT_MYSQL_USER) String mySqlDbUser,
@Optional(DEFAULT_MYSQL_PASSWORD) String mySqlDbPassword, @Optional(DEFAULT_TEST_TABLE) String mySqlTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mySqlDbHost);
testDbConfig.setDatabaseName(mySqlDbName);
testDbConfig.setDatabasePassword(mySqlDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mySqlDbPort));
testDbConfig.setDatabaseType(MySQLDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mySqlDbUser);
testDbConfig.setUseSSL(false);
testTable = mySqlTestTable;
//DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MySQLDatabaseService.DB_NAME, MySQLDatabaseService.getInstance());
}
@Test
public void testDoPost() {
when(request.getParameter("databaseType")).thenReturn(testDbConfig.getDatabaseType());
when(request.getParameter("databaseServer")).thenReturn(testDbConfig.getDatabaseHost());
when(request.getParameter("databasePort")).thenReturn("" + testDbConfig.getDatabasePort());
when(request.getParameter("databaseUser")).thenReturn(testDbConfig.getDatabaseUser());
when(request.getParameter("databasePassword")).thenReturn(testDbConfig.getDatabasePassword());
when(request.getParameter("initialDatabase")).thenReturn(testDbConfig.getDatabaseName());
when(request.getParameter("query")).thenReturn("SELECT count(*) FROM " + testTable);
StringWriter sw = new StringWriter();
PrintWriter pw = new PrintWriter(sw);
try {
when(response.getWriter()).thenReturn(pw);
TestQueryCommand executeQueryCommand = new TestQueryCommand();
executeQueryCommand.doPost(request, response);
String result = sw.getBuffer().toString().trim();
JSONObject json = new JSONObject(result);
String code = json.getString("code");
Assert.assertEquals(code, "ok");
String queryResult = json.getString("QueryResult");
Assert.assertNotNull(queryResult);
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

96
extensions/database/test/com/google/refine/extension/database/mariadb/MariaDBConnectionManagerTest.java
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@ -1,96 +0,0 @@
package com.google.refine.extension.database.mariadb;
import java.sql.Connection;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
public class MariaDBConnectionManagerTest extends DBExtensionTests {
private DatabaseConfiguration testDbConfig;
@BeforeTest
@Parameters({ "mariaDbName", "mariaDbHost", "mariaDbPort", "mariaDbUser", "mariaDbPassword", "mariaDbTestTable"})
public void beforeTest(@Optional(DEFAULT_MARIADB_NAME) String mariaDbName, @Optional(DEFAULT_MARIADB_HOST) String mariaDbHost,
@Optional(DEFAULT_MARIADB_PORT) String mariaDbPort, @Optional(DEFAULT_MARIADB_USER) String mariaDbUser,
@Optional(DEFAULT_MARIADB_PASSWORD) String mariaDbPassword, @Optional(DEFAULT_TEST_TABLE) String mariaDbTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mariaDbHost);
testDbConfig.setDatabaseName(mariaDbName);
testDbConfig.setDatabasePassword(mariaDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mariaDbPort));
testDbConfig.setDatabaseType(MariaDBDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mariaDbUser);
testDbConfig.setUseSSL(false);
// testTable = mariaDbTestTable;
// DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MariaDBDatabaseService.DB_NAME, MariaDBDatabaseService.getInstance());
}
@Test
public void testTestConnection() {
try {
boolean conn = MariaDBConnectionManager.getInstance().testConnection(testDbConfig);
Assert.assertEquals(conn, true);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testGetConnection() {
try {
Connection conn = MariaDBConnectionManager.getInstance().getConnection(testDbConfig, true);
Assert.assertNotNull(conn);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testShutdown() {
try {
Connection conn = MariaDBConnectionManager.getInstance().getConnection(testDbConfig, true);
Assert.assertNotNull(conn);
MariaDBConnectionManager.getInstance().shutdown();
if(conn != null) {
Assert.assertEquals(conn.isClosed(), true);
}
} catch (Exception e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

172
extensions/database/test/com/google/refine/extension/database/mariadb/MariaDBDatabaseServiceTest.java
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package com.google.refine.extension.database.mariadb;
import java.sql.Connection;
import java.util.List;
import org.mockito.MockitoAnnotations;
import org.testng.Assert;
import org.testng.annotations.BeforeTest;
import org.testng.annotations.Optional;
import org.testng.annotations.Parameters;
import org.testng.annotations.Test;
import com.google.refine.extension.database.DBExtensionTestUtils;
import com.google.refine.extension.database.DBExtensionTests;
import com.google.refine.extension.database.DatabaseConfiguration;
import com.google.refine.extension.database.DatabaseService;
import com.google.refine.extension.database.DatabaseServiceException;
import com.google.refine.extension.database.model.DatabaseColumn;
import com.google.refine.extension.database.model.DatabaseInfo;
import com.google.refine.extension.database.model.DatabaseRow;
public class MariaDBDatabaseServiceTest extends DBExtensionTests{
private DatabaseConfiguration testDbConfig;
private String testTable;
@BeforeTest
@Parameters({ "mariaDbName", "mariaDbHost", "mariaDbPort", "mariaDbUser", "mariaDbPassword", "mariaDbTestTable"})
public void beforeTest(@Optional(DEFAULT_MARIADB_NAME) String mariaDbName, @Optional(DEFAULT_MARIADB_HOST) String mariaDbHost,
@Optional(DEFAULT_MARIADB_PORT) String mariaDbPort, @Optional(DEFAULT_MARIADB_USER) String mariaDbUser,
@Optional(DEFAULT_MARIADB_PASSWORD) String mariaDbPassword, @Optional(DEFAULT_TEST_TABLE) String mariaDbTestTable) {
MockitoAnnotations.initMocks(this);
testDbConfig = new DatabaseConfiguration();
testDbConfig.setDatabaseHost(mariaDbHost);
testDbConfig.setDatabaseName(mariaDbName);
testDbConfig.setDatabasePassword(mariaDbPassword);
testDbConfig.setDatabasePort(Integer.parseInt(mariaDbPort));
testDbConfig.setDatabaseType(MariaDBDatabaseService.DB_NAME);
testDbConfig.setDatabaseUser(mariaDbUser);
testDbConfig.setUseSSL(false);
testTable = mariaDbTestTable;
//DBExtensionTestUtils.initTestData(testDbConfig);
DatabaseService.DBType.registerDatabase(MariaDBDatabaseService.DB_NAME, MariaDBDatabaseService.getInstance());
}
@Test
public void testGetDatabaseUrl() {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService)DatabaseService.get(MariaDBDatabaseService.DB_NAME);
String dbUrl = pgSqlService.getDatabaseUrl(testDbConfig);
//System.out.println("dbUrl:" + dbUrl);
Assert.assertNotNull(dbUrl);
Assert.assertEquals(dbUrl, DBExtensionTestUtils.getJDBCUrl(testDbConfig));
}
@Test
public void testGetConnection() {
try {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService)DatabaseService.get(MariaDBDatabaseService.DB_NAME);
Connection conn = pgSqlService.getConnection(testDbConfig);
Assert.assertNotNull(conn);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testTestConnection() {
try {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService)DatabaseService.get(MariaDBDatabaseService.DB_NAME);
boolean result = pgSqlService.testConnection(testDbConfig);
Assert.assertEquals(result, true);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testConnect() {
try {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService)DatabaseService.get(MariaDBDatabaseService.DB_NAME);
DatabaseInfo databaseInfo = pgSqlService.connect(testDbConfig);
Assert.assertNotNull(databaseInfo);
} catch (DatabaseServiceException e) {
e.printStackTrace();
}
}
@Test
public void testExecuteQuery() {
try {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService) DatabaseService
.get(MariaDBDatabaseService.DB_NAME);
DatabaseInfo databaseInfo = pgSqlService.testQuery(testDbConfig, "SELECT * FROM " + testTable);
Assert.assertNotNull(databaseInfo);
} catch (DatabaseServiceException e) {
e.printStackTrace();
}
}
@Test
public void testBuildLimitQuery() {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService) DatabaseService.get(MariaDBDatabaseService.DB_NAME);
String limitQuery = pgSqlService.buildLimitQuery(100, 0, "SELECT * FROM " + testTable);
Assert.assertNotNull(limitQuery);
Assert.assertEquals(limitQuery, "SELECT * FROM " + testTable + " LIMIT " + 100 + " OFFSET " + 0 + ";");
}
@Test
public void testGetRows() {
try {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService) DatabaseService
.get(MariaDBDatabaseService.DB_NAME);
List<DatabaseRow> dbRows = pgSqlService.getRows(testDbConfig, "SELECT * FROM " + testTable);
Assert.assertNotNull(dbRows);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
@Test
public void testGetInstance() {
MariaDBDatabaseService instance = MariaDBDatabaseService.getInstance();
Assert.assertNotNull(instance);
}
@Test
public void testGetColumns() {
List<DatabaseColumn> dbColumns;
try {
MariaDBDatabaseService pgSqlService = (MariaDBDatabaseService) DatabaseService
.get(MariaDBDatabaseService.DB_NAME);
dbColumns = pgSqlService.getColumns(testDbConfig, "SELECT * FROM " + testTable);
Assert.assertNotNull(dbColumns);
} catch (DatabaseServiceException e) {
// TODO Auto-generated catch block
e.printStackTrace();
}
}
}

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