/* Copyright 2011, Google Inc. All rights reserved. Redistribution and use in source and binary forms, with or without modification, are permitted provided that the following conditions are met: * Redistributions of source code must retain the above copyright notice, this list of conditions and the following disclaimer. * Redistributions in binary form must reproduce the above copyright notice, this list of conditions and the following disclaimer in the documentation and/or other materials provided with the distribution. * Neither the name of Google Inc. nor the names of its contributors may be used to endorse or promote products derived from this software without specific prior written permission. THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. */ package com.google.refine.importers; import java.io.IOException; import java.io.Serializable; import java.util.ArrayList; import java.util.List; import org.json.JSONObject; import org.slf4j.Logger; import org.slf4j.LoggerFactory; import com.google.refine.ProjectMetadata; import com.google.refine.expr.ExpressionUtils; import com.google.refine.importing.ImportingJob; import com.google.refine.model.Cell; import com.google.refine.model.Column; import com.google.refine.model.ModelException; import com.google.refine.model.Project; import com.google.refine.model.Row; import com.google.refine.util.JSONUtilities; abstract public class TabularImportingParserBase extends ImportingParserBase { private final static Logger logger = LoggerFactory.getLogger("ImportingParserBase"); static public interface TableDataReader { public List getNextRowOfCells() throws IOException; } @Override public JSONObject createParserUIInitializationData(ImportingJob job, List fileRecords, String format) { JSONObject options = super.createParserUIInitializationData(job, fileRecords, format); JSONUtilities.safePut(options, "ignoreLines", -1); // number of blank lines at the beginning to ignore JSONUtilities.safePut(options, "headerLines", 1); // number of header lines JSONUtilities.safePut(options, "skipDataLines", 0); // number of initial data lines to skip JSONUtilities.safePut(options, "storeBlankRows", true); JSONUtilities.safePut(options, "storeBlankCellsAsNulls", true); return options; } /** * @param useInputStream true if parser takes an InputStream, false if it takes a Reader. * */ protected TabularImportingParserBase(boolean useInputStream) { super(useInputStream); } static public void readTable( Project project, ProjectMetadata metadata, ImportingJob job, TableDataReader reader, String fileSource, int limit, JSONObject options, List exceptions ) { int ignoreLines = JSONUtilities.getInt(options, "ignoreLines", -1); int headerLines = JSONUtilities.getInt(options, "headerLines", 1); int skipDataLines = JSONUtilities.getInt(options, "skipDataLines", 0); int limit2 = JSONUtilities.getInt(options, "limit", -1); if (limit > 0) { if (limit2 > 0) { limit2 = Math.min(limit, limit2); } else { limit2 = limit; } } boolean guessCellValueTypes = JSONUtilities.getBoolean(options, "guessCellValueTypes", false); boolean storeBlankRows = JSONUtilities.getBoolean(options, "storeBlankRows", true); boolean storeBlankCellsAsNulls = JSONUtilities.getBoolean(options, "storeBlankCellsAsNulls", true); boolean includeFileSources = JSONUtilities.getBoolean(options, "includeFileSources", false); String fileNameColumnName = "File"; if (includeFileSources) { if (project.columnModel.getColumnByName(fileNameColumnName) == null) { try { project.columnModel.addColumn( 0, new Column(project.columnModel.allocateNewCellIndex(), fileNameColumnName), false); } catch (ModelException e) { // Ignore: We already checked for duplicate name. logger.info("ModelException",e); } } } List columnNames = new ArrayList(); boolean hasOurOwnColumnNames = headerLines > 0; List cells = null; int rowsWithData = 0; try { while (!job.canceled && (cells = reader.getNextRowOfCells()) != null) { if (ignoreLines > 0) { ignoreLines--; continue; } if (headerLines > 0) { // header lines for (int c = 0; c < cells.size(); c++) { Object cell = cells.get(c); String columnName; if (cell == null) { // add column even if cell is blank columnName = ""; } else if (cell instanceof Cell) { columnName = ((Cell) cell).value.toString().trim(); } else { columnName = cell.toString().trim(); } ImporterUtilities.appendColumnName(columnNames, c, columnName); } headerLines--; if (headerLines == 0) { ImporterUtilities.setupColumns(project, columnNames); } } else { // data lines Row row = new Row(columnNames.size()); if (storeBlankRows) { rowsWithData++; } else if (cells.size() > 0) { rowsWithData++; } if (skipDataLines <= 0 || rowsWithData > skipDataLines) { boolean rowHasData = false; for (int c = 0; c < cells.size(); c++) { Column column = ImporterUtilities.getOrAllocateColumn( project, columnNames, c, hasOurOwnColumnNames); Object value = cells.get(c); if (value instanceof Cell) { row.setCell(column.getCellIndex(), (Cell) value); rowHasData = true; } else if (ExpressionUtils.isNonBlankData(value)) { Serializable storedValue; if (value instanceof String) { storedValue = guessCellValueTypes ? ImporterUtilities.parseCellValue((String) value) : (String) value; } else { storedValue = ExpressionUtils.wrapStorable(value); } row.setCell(column.getCellIndex(), new Cell(storedValue, null)); rowHasData = true; } else if (!storeBlankCellsAsNulls) { row.setCell(column.getCellIndex(), new Cell("", null)); } else { row.setCell(column.getCellIndex(), null); } } if (rowHasData || storeBlankRows) { if (includeFileSources) { row.setCell( project.columnModel.getColumnByName(fileNameColumnName).getCellIndex(), new Cell(fileSource, null)); } project.rows.add(row); } if (limit2 > 0 && project.rows.size() >= limit2) { break; } } } } } catch (IOException e) { exceptions.add(e); } } }