From 5e4ac37a43947374dfa0f0e7acd9be1027d5582b Mon Sep 17 00:00:00 2001 From: s434766 Date: Sat, 15 May 2021 13:41:31 +0200 Subject: [PATCH] mlflow --- MLproject | 11 +++ lab8-mlflow.py | 73 ++++++++++++++++++ .../meta.yaml | 15 ++++ .../metrics/rmse | 1 + .../params/Last loss | 1 + .../params/batch size | 1 + .../params/epochs | 1 + .../tags/mlflow.source.git.commit | 1 + .../tags/mlflow.source.name | 1 + .../tags/mlflow.source.type | 1 + .../tags/mlflow.user | 1 + .../meta.yaml | 15 ++++ .../metrics/rmse | 1 + .../params/Last loss | 1 + .../params/batch size | 1 + .../params/epochs | 1 + .../tags/mlflow.source.git.commit | 1 + .../tags/mlflow.source.name | 1 + .../tags/mlflow.source.type | 1 + .../tags/mlflow.user | 1 + .../meta.yaml | 15 ++++ .../metrics/rmse | 1 + .../params/Last loss | 1 + .../params/batch size | 1 + .../params/epochs | 1 + .../tags/mlflow.source.git.commit | 1 + .../tags/mlflow.source.name | 1 + .../tags/mlflow.source.type | 1 + .../tags/mlflow.user | 1 + 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torch +import sys +import mlflow +import torch.nn.functional as F +from torch import nn +from sklearn.model_selection import train_test_split +from sklearn.metrics import accuracy_score, mean_squared_error +import numpy as np +import pandas as pd +np.set_printoptions(suppress=False) + + +class LogisticRegressionModel(nn.Module): + def __init__(self, input_dim, output_dim): + super(LogisticRegressionModel, self).__init__() + self.linear = nn.Linear(input_dim, output_dim) + self.sigmoid = nn.Sigmoid() + def forward(self, x): + out = self.linear(x) + return self.sigmoid(out) + +with mlflow.start_run(): + data_train = pd.read_csv("data_train.csv") + data_test = pd.read_csv("data_test.csv") + data_val = pd.read_csv("data_val.csv") + FEATURES = ['age','hypertension','heart_disease','ever_married', 'avg_glucose_level', 'bmi'] + + x_train = data_train[FEATURES].astype(np.float32) + y_train = data_train['stroke'].astype(np.float32) + + x_test = data_test[FEATURES].astype(np.float32) + y_test = data_test['stroke'].astype(np.float32) + + fTrain = torch.from_numpy(x_train.values) + tTrain = torch.from_numpy(y_train.values.reshape(2945,1)) + + fTest= torch.from_numpy(x_test.values) + tTest = torch.from_numpy(y_test.values) + + batch_size = int(sys.argv[1]) if len(sys.argv) > 1 else 16 + num_epochs = int(sys.argv[2]) if len(sys.argv) > 2 else 5 + learning_rate = 0.001 + input_dim = 6 + output_dim = 1 + + model = LogisticRegressionModel(input_dim, output_dim) + + criterion = torch.nn.BCELoss(reduction='mean') + optimizer = torch.optim.SGD(model.parameters(), lr = learning_rate) + + for epoch in range(num_epochs): + # print ("Epoch #",epoch) + model.train() + optimizer.zero_grad() + # Forward pass + y_pred = model(fTrain) + # Compute Loss + loss = criterion(y_pred, tTrain) + # print(loss.item()) + # Backward pass + loss.backward() + optimizer.step() + y_pred = model(fTest) + # print("predicted Y value: ", y_pred.data) + + torch.save(model.state_dict(), 'stroke.pth') + + rmse = 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