Added optional file log out
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@ -2,6 +2,7 @@
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A small script to help you analyze the output logs from GA algorithm.
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A small script to help you analyze the output logs from GA algorithm.
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It shows you best and worst population with all values.
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It shows you best and worst population with all values.
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Specify the input file as an exec parameter.
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Specify the input file as an exec parameter.
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Optional: Speficy output file.
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"""
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"""
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import sys
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import sys
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@ -27,26 +28,27 @@ def fitnessPlot(pop):
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print("Figure saved to file.")
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print("Figure saved to file.")
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def printBestWorstGenes(pop):
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def printBestWorstGenes(pop, logOut=sys.stdout):
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"""
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"""
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Print info about best and worst specimen.
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Print info about best and worst specimen.
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:param pop: Population array with fitness
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:param pop: Population array with fitness
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:param logOut: If specified, print messages to a file.
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"""
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"""
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fitnesses = [i[4] for i in pop]
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fitnesses = [i[4] for i in pop]
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bestIdxs = (numpy.where(fitnesses == numpy.max(fitnesses)))[0]
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bestIdxs = (numpy.where(fitnesses == numpy.max(fitnesses)))[0]
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print("Best Fitness:", max(fitnesses))
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print("Best Fitness:", max(fitnesses), file=logOut)
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for idx in bestIdxs:
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for idx in bestIdxs:
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print("Affinities: food={}, water={}, rest={}, walking={}".format(pop[idx][0], pop[idx][1],
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print("Affinities: food={}, water={}, rest={}, walking={}".format(pop[idx][0], pop[idx][1],
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pop[idx][2], pop[idx][3]))
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pop[idx][2], pop[idx][3]), file=logOut)
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worstIdxs = (numpy.where(fitnesses == numpy.min(fitnesses)))[0]
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worstIdxs = (numpy.where(fitnesses == numpy.min(fitnesses)))[0]
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print("Worst Fitness:", min(fitnesses))
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print("Worst Fitness:", min(fitnesses), file=logOut)
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for idx in worstIdxs:
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for idx in worstIdxs:
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print("Affinities: food={}, water={}, rest={}, walking={}".format(pop[idx][0], pop[idx][1],
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print("Affinities: food={}, water={}, rest={}, walking={}".format(pop[idx][0], pop[idx][1],
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pop[idx][2], pop[idx][3]))
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pop[idx][2], pop[idx][3]), file=logOut)
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if len(sys.argv) < 2:
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if len(sys.argv) < 2:
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@ -62,4 +64,9 @@ else:
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pop.append(literal_eval(line))
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pop.append(literal_eval(line))
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fitnessPlot(pop)
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fitnessPlot(pop)
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printBestWorstGenes(pop)
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if len(sys.argv) >= 3:
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with open(sys.argv[2], "w+") as f:
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printBestWorstGenes(pop, f)
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print("Best/worst species saved to file.")
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else:
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printBestWorstGenes(pop)
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