ium_444507/lab07_sacred.py

#!/usr/bin/python

import numpy as np
import torch
from torch import nn
from torch.autograd import Variable
from sklearn.datasets import load_iris
from sklearn.model_selection import train_test_split
from sklearn.metrics import accuracy_score, f1_score
import torch.nn.functional as F
import pandas as pd
from sklearn import preprocessing
import sys
from sacred.observers import MongoObserver, FileStorageObserver
from sacred import Experiment
import random
import time

ex = Experiment(save_git_info=False)
ex.observers.append(MongoObserver(url='mongodb://admin:IUM_2021@172.17.0.1:27017',
                                  db_name='sacred'))
ex.observers.append(FileStorageObserver('s444507_sacred_FileObserver'))

@ex.config
def my_config():
    epochs = "50"


class Model(nn.Module):
    def __init__(self, input_dim):
        super(Model, self).__init__()
        self.layer1 = nn.Linear(input_dim, 100)
        self.layer2 = nn.Linear(100, 60)
        self.layer3 = nn.Linear(60, 5)

    def forward(self, x):
        x = F.relu(self.layer1(x))
        x = F.relu(self.layer2(x))
        x = F.softmax(self.layer3(x))  # To check with the loss function
        return x


def load_dataset_raw():
    """ Load data from .csv file. """
    cars = pd.read_csv('./Car_Prices_Poland_Kaggle.csv', usecols=[1, 4, 5, 6, 10], sep=',')
    return cars


def load_dataset_files():
    """ Load shuffled, splitted dev and train files from .csv files. """

    cars_dev = pd.read_csv('./Car_Prices_Poland_Kaggle_dev.csv', usecols=[1, 4, 5, 6, 10], sep=',', names= [str(i) for i in range(5)])
    cars_train = pd.read_csv('./Car_Prices_Poland_Kaggle_train.csv', usecols=[1, 4, 5, 6, 10], sep=',', names= [str(i) for i in range(5)])

    return cars_dev, cars_train


def remove_rows(data_dev, data_train):
    dev_removed_rows = data_dev.loc[(data_dev['0'] == 'audi') | (data_dev['0'] == 'bmw') | (data_dev['0'] == 'ford') | (data_dev['0'] == 'opel') | (data_dev['0'] == 'volkswagen')]
    train_removed_rows = data_train.loc[(data_train['0'] == 'audi') | (data_train['0'] == 'bmw') | (data_train['0'] == 'ford') | (data_train['0'] == 'opel') | (data_train['0'] == 'volkswagen')]

    return dev_removed_rows, train_removed_rows


def prepare_labels_features(dataset):
    """ Label make column"""
    le = preprocessing.LabelEncoder()
    mark_column = np.array(dataset[:]['0'])
    le.fit(mark_column)

    print(list(le.classes_))
    lab = le.transform(mark_column)
    feat = dataset.drop(['0'], axis=1).to_numpy()

    mm_scaler = preprocessing.MinMaxScaler()
    feat = mm_scaler.fit_transform(feat)

    return lab, feat

@ex.automain
def my_main(epochs, _run):
    # Prepare dataset
    print("Loading dataset...")
    dev, train = load_dataset_files()
    print("Dataset loaded")

    print("Preparing dataset...")
    dev, train = remove_rows(dev, train)
    labels_train, features_train = prepare_labels_features(train)
    labels_test, features_test = prepare_labels_features(dev)
    print("Dataset prepared")

    # Training
    model = Model(features_train.shape[1])
    optimizer = torch.optim.Adam(model.parameters(), lr=0.01)
    loss_fn = nn.CrossEntropyLoss()

    # number of epochs is parametrized
    try:
        epochs_n = int(epochs)
    except Exception as e:
        print(e)
        print("Setting default epochs value to 1000.")
        epochs_n = 10

    print(f"Number of epochs: {epochs_n}")

    print("Starting model training...")
    x_train, y_train = Variable(torch.from_numpy(features_train)).float(), Variable(torch.from_numpy(labels_train)).long()
    for epoch in range(1, epochs_n + 1):
        print("Epoch #", epoch)
        y_pred = model(x_train)
        loss = loss_fn(y_pred, y_train)
        print(f"The loss calculated: {loss}")

        # Zero gradients
        optimizer.zero_grad()
        loss.backward()  # Gradients
        optimizer.step()  # Update
    print("Model training finished")

    x_test = Variable(torch.from_numpy(features_test)).float()
    pred = model(x_test)
    pred = pred.detach().numpy()
    print(f"The accuracy metric is: {accuracy_score(labels_test, np.argmax(pred, axis=1))}")

    accuracy = accuracy_score(labels_test, np.argmax(pred, axis=1))
    f1 = f1_score(labels_test, np.argmax(pred, axis=1), average='weighted')
    _run.log_scalar("measure.accuracy", accuracy)
    _run.log_scalar("measure.f1", f1)

    print("Saving model to file...")
    torch.save(model, "CarPrices_pytorch_model.pkl")
    print("Model saved with name: CarPrices_pytorch_model.pkl")

    saved_model = torch.load("CarPrices_pytorch_model.pkl")
    print(np.argmax(saved_model(x_test[0]).detach().numpy(), axis=0))

    pd_predictions = pd.DataFrame(pred)
    pd_predictions.to_csv("./prediction_results.csv")

# ex.run()
ex.add_artifact("CarPrices_pytorch_model.pkl")