s452108-mlworkshops/count2.sh
2020-04-03 17:03:05 +02:00

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#!/bin/bash
cat output.txt | awk '{print (($7 + $8 + $9)/($7 + $8 + $6))*100;}' > clear.txt
avg=$(numaverage clear.txt)
srr_matching=$(grep -x "0" results.txt | wc -l)
all=$(cat results.txt | wc -l)
echo "$srr_matching"
echo "$all"
srr=$((srr_matching/all))
echo "Medium WER: $avg" >> clear.txt
echo "SRR: $srr" >> clear.txt