1799 lines
60 KiB
Python
1799 lines
60 KiB
Python
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import importlib
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from typing import TYPE_CHECKING, Optional, Sequence, Tuple, Union
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from pandas._config import get_option
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from pandas._typing import Label
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from pandas.util._decorators import Appender, Substitution
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from pandas.core.dtypes.common import is_integer, is_list_like
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from pandas.core.dtypes.generic import ABCDataFrame, ABCSeries
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from pandas.core.base import PandasObject
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if TYPE_CHECKING:
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from pandas import DataFrame
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def hist_series(
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self,
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by=None,
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ax=None,
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grid: bool = True,
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xlabelsize: Optional[int] = None,
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xrot: Optional[float] = None,
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ylabelsize: Optional[int] = None,
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yrot: Optional[float] = None,
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figsize: Optional[Tuple[int, int]] = None,
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bins: Union[int, Sequence[int]] = 10,
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backend: Optional[str] = None,
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legend: bool = False,
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**kwargs,
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):
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"""
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Draw histogram of the input series using matplotlib.
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Parameters
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----------
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by : object, optional
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If passed, then used to form histograms for separate groups.
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ax : matplotlib axis object
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If not passed, uses gca().
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grid : bool, default True
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Whether to show axis grid lines.
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xlabelsize : int, default None
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If specified changes the x-axis label size.
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xrot : float, default None
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Rotation of x axis labels.
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ylabelsize : int, default None
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If specified changes the y-axis label size.
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yrot : float, default None
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Rotation of y axis labels.
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figsize : tuple, default None
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Figure size in inches by default.
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bins : int or sequence, default 10
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Number of histogram bins to be used. If an integer is given, bins + 1
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bin edges are calculated and returned. If bins is a sequence, gives
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bin edges, including left edge of first bin and right edge of last
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bin. In this case, bins is returned unmodified.
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backend : str, default None
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Backend to use instead of the backend specified in the option
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``plotting.backend``. For instance, 'matplotlib'. Alternatively, to
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specify the ``plotting.backend`` for the whole session, set
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``pd.options.plotting.backend``.
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.. versionadded:: 1.0.0
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legend : bool, default False
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Whether to show the legend.
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.. versionadded:: 1.1.0
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**kwargs
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To be passed to the actual plotting function.
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Returns
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-------
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matplotlib.AxesSubplot
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A histogram plot.
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See Also
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--------
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matplotlib.axes.Axes.hist : Plot a histogram using matplotlib.
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"""
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plot_backend = _get_plot_backend(backend)
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return plot_backend.hist_series(
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self,
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by=by,
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ax=ax,
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grid=grid,
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xlabelsize=xlabelsize,
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xrot=xrot,
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ylabelsize=ylabelsize,
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yrot=yrot,
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figsize=figsize,
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bins=bins,
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legend=legend,
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**kwargs,
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)
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def hist_frame(
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data: "DataFrame",
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column: Union[Label, Sequence[Label]] = None,
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by=None,
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grid: bool = True,
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xlabelsize: Optional[int] = None,
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xrot: Optional[float] = None,
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ylabelsize: Optional[int] = None,
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yrot: Optional[float] = None,
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ax=None,
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sharex: bool = False,
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sharey: bool = False,
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figsize: Optional[Tuple[int, int]] = None,
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layout: Optional[Tuple[int, int]] = None,
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bins: Union[int, Sequence[int]] = 10,
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backend: Optional[str] = None,
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legend: bool = False,
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**kwargs,
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):
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"""
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Make a histogram of the DataFrame's.
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A `histogram`_ is a representation of the distribution of data.
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This function calls :meth:`matplotlib.pyplot.hist`, on each series in
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the DataFrame, resulting in one histogram per column.
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.. _histogram: https://en.wikipedia.org/wiki/Histogram
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Parameters
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----------
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data : DataFrame
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The pandas object holding the data.
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column : str or sequence
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If passed, will be used to limit data to a subset of columns.
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by : object, optional
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If passed, then used to form histograms for separate groups.
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grid : bool, default True
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Whether to show axis grid lines.
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xlabelsize : int, default None
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If specified changes the x-axis label size.
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xrot : float, default None
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Rotation of x axis labels. For example, a value of 90 displays the
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x labels rotated 90 degrees clockwise.
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ylabelsize : int, default None
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If specified changes the y-axis label size.
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yrot : float, default None
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Rotation of y axis labels. For example, a value of 90 displays the
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y labels rotated 90 degrees clockwise.
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ax : Matplotlib axes object, default None
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The axes to plot the histogram on.
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sharex : bool, default True if ax is None else False
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In case subplots=True, share x axis and set some x axis labels to
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invisible; defaults to True if ax is None otherwise False if an ax
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is passed in.
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Note that passing in both an ax and sharex=True will alter all x axis
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labels for all subplots in a figure.
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sharey : bool, default False
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In case subplots=True, share y axis and set some y axis labels to
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invisible.
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figsize : tuple
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The size in inches of the figure to create. Uses the value in
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`matplotlib.rcParams` by default.
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layout : tuple, optional
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Tuple of (rows, columns) for the layout of the histograms.
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bins : int or sequence, default 10
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Number of histogram bins to be used. If an integer is given, bins + 1
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bin edges are calculated and returned. If bins is a sequence, gives
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bin edges, including left edge of first bin and right edge of last
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bin. In this case, bins is returned unmodified.
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backend : str, default None
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Backend to use instead of the backend specified in the option
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``plotting.backend``. For instance, 'matplotlib'. Alternatively, to
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specify the ``plotting.backend`` for the whole session, set
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``pd.options.plotting.backend``.
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.. versionadded:: 1.0.0
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legend : bool, default False
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Whether to show the legend.
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.. versionadded:: 1.1.0
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**kwargs
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All other plotting keyword arguments to be passed to
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:meth:`matplotlib.pyplot.hist`.
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Returns
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-------
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matplotlib.AxesSubplot or numpy.ndarray of them
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See Also
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--------
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matplotlib.pyplot.hist : Plot a histogram using matplotlib.
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Examples
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--------
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This example draws a histogram based on the length and width of
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some animals, displayed in three bins
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.. plot::
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:context: close-figs
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>>> df = pd.DataFrame({
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... 'length': [1.5, 0.5, 1.2, 0.9, 3],
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... 'width': [0.7, 0.2, 0.15, 0.2, 1.1]
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... }, index=['pig', 'rabbit', 'duck', 'chicken', 'horse'])
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>>> hist = df.hist(bins=3)
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"""
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plot_backend = _get_plot_backend(backend)
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return plot_backend.hist_frame(
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data,
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column=column,
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by=by,
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grid=grid,
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xlabelsize=xlabelsize,
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xrot=xrot,
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ylabelsize=ylabelsize,
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yrot=yrot,
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ax=ax,
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sharex=sharex,
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sharey=sharey,
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figsize=figsize,
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layout=layout,
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legend=legend,
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bins=bins,
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**kwargs,
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)
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_boxplot_doc = """
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Make a box plot from DataFrame columns.
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Make a box-and-whisker plot from DataFrame columns, optionally grouped
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by some other columns. A box plot is a method for graphically depicting
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groups of numerical data through their quartiles.
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The box extends from the Q1 to Q3 quartile values of the data,
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with a line at the median (Q2). The whiskers extend from the edges
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of box to show the range of the data. By default, they extend no more than
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`1.5 * IQR (IQR = Q3 - Q1)` from the edges of the box, ending at the farthest
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data point within that interval. Outliers are plotted as separate dots.
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For further details see
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Wikipedia's entry for `boxplot <https://en.wikipedia.org/wiki/Box_plot>`_.
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Parameters
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----------
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column : str or list of str, optional
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Column name or list of names, or vector.
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Can be any valid input to :meth:`pandas.DataFrame.groupby`.
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by : str or array-like, optional
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Column in the DataFrame to :meth:`pandas.DataFrame.groupby`.
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One box-plot will be done per value of columns in `by`.
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ax : object of class matplotlib.axes.Axes, optional
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The matplotlib axes to be used by boxplot.
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fontsize : float or str
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Tick label font size in points or as a string (e.g., `large`).
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rot : int or float, default 0
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The rotation angle of labels (in degrees)
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with respect to the screen coordinate system.
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grid : bool, default True
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Setting this to True will show the grid.
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figsize : A tuple (width, height) in inches
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The size of the figure to create in matplotlib.
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layout : tuple (rows, columns), optional
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For example, (3, 5) will display the subplots
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using 3 columns and 5 rows, starting from the top-left.
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return_type : {'axes', 'dict', 'both'} or None, default 'axes'
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The kind of object to return. The default is ``axes``.
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* 'axes' returns the matplotlib axes the boxplot is drawn on.
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* 'dict' returns a dictionary whose values are the matplotlib
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Lines of the boxplot.
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* 'both' returns a namedtuple with the axes and dict.
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* when grouping with ``by``, a Series mapping columns to
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``return_type`` is returned.
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If ``return_type`` is `None`, a NumPy array
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of axes with the same shape as ``layout`` is returned.
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%(backend)s\
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**kwargs
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All other plotting keyword arguments to be passed to
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:func:`matplotlib.pyplot.boxplot`.
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Returns
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-------
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result
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See Notes.
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See Also
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--------
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Series.plot.hist: Make a histogram.
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matplotlib.pyplot.boxplot : Matplotlib equivalent plot.
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Notes
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-----
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The return type depends on the `return_type` parameter:
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* 'axes' : object of class matplotlib.axes.Axes
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* 'dict' : dict of matplotlib.lines.Line2D objects
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* 'both' : a namedtuple with structure (ax, lines)
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For data grouped with ``by``, return a Series of the above or a numpy
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array:
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* :class:`~pandas.Series`
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* :class:`~numpy.array` (for ``return_type = None``)
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Use ``return_type='dict'`` when you want to tweak the appearance
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of the lines after plotting. In this case a dict containing the Lines
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making up the boxes, caps, fliers, medians, and whiskers is returned.
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Examples
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--------
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Boxplots can be created for every column in the dataframe
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by ``df.boxplot()`` or indicating the columns to be used:
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.. plot::
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:context: close-figs
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>>> np.random.seed(1234)
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>>> df = pd.DataFrame(np.random.randn(10, 4),
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... columns=['Col1', 'Col2', 'Col3', 'Col4'])
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>>> boxplot = df.boxplot(column=['Col1', 'Col2', 'Col3'])
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Boxplots of variables distributions grouped by the values of a third
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variable can be created using the option ``by``. For instance:
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.. plot::
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:context: close-figs
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>>> df = pd.DataFrame(np.random.randn(10, 2),
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... columns=['Col1', 'Col2'])
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>>> df['X'] = pd.Series(['A', 'A', 'A', 'A', 'A',
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... 'B', 'B', 'B', 'B', 'B'])
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>>> boxplot = df.boxplot(by='X')
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A list of strings (i.e. ``['X', 'Y']``) can be passed to boxplot
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in order to group the data by combination of the variables in the x-axis:
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.. plot::
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:context: close-figs
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>>> df = pd.DataFrame(np.random.randn(10, 3),
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... columns=['Col1', 'Col2', 'Col3'])
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>>> df['X'] = pd.Series(['A', 'A', 'A', 'A', 'A',
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... 'B', 'B', 'B', 'B', 'B'])
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>>> df['Y'] = pd.Series(['A', 'B', 'A', 'B', 'A',
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... 'B', 'A', 'B', 'A', 'B'])
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>>> boxplot = df.boxplot(column=['Col1', 'Col2'], by=['X', 'Y'])
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The layout of boxplot can be adjusted giving a tuple to ``layout``:
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.. plot::
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:context: close-figs
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>>> boxplot = df.boxplot(column=['Col1', 'Col2'], by='X',
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... layout=(2, 1))
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Additional formatting can be done to the boxplot, like suppressing the grid
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(``grid=False``), rotating the labels in the x-axis (i.e. ``rot=45``)
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or changing the fontsize (i.e. ``fontsize=15``):
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.. plot::
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:context: close-figs
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>>> boxplot = df.boxplot(grid=False, rot=45, fontsize=15)
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The parameter ``return_type`` can be used to select the type of element
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returned by `boxplot`. When ``return_type='axes'`` is selected,
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the matplotlib axes on which the boxplot is drawn are returned:
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>>> boxplot = df.boxplot(column=['Col1', 'Col2'], return_type='axes')
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>>> type(boxplot)
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<class 'matplotlib.axes._subplots.AxesSubplot'>
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When grouping with ``by``, a Series mapping columns to ``return_type``
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is returned:
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>>> boxplot = df.boxplot(column=['Col1', 'Col2'], by='X',
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... return_type='axes')
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>>> type(boxplot)
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<class 'pandas.core.series.Series'>
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If ``return_type`` is `None`, a NumPy array of axes with the same shape
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as ``layout`` is returned:
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>>> boxplot = df.boxplot(column=['Col1', 'Col2'], by='X',
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... return_type=None)
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>>> type(boxplot)
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<class 'numpy.ndarray'>
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"""
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_backend_doc = """\
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backend : str, default None
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Backend to use instead of the backend specified in the option
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|
``plotting.backend``. For instance, 'matplotlib'. Alternatively, to
|
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|
specify the ``plotting.backend`` for the whole session, set
|
||
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``pd.options.plotting.backend``.
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.. versionadded:: 1.0.0
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"""
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_bar_or_line_doc = """
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Parameters
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----------
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x : label or position, optional
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Allows plotting of one column versus another. If not specified,
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the index of the DataFrame is used.
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y : label or position, optional
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Allows plotting of one column versus another. If not specified,
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all numerical columns are used.
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color : str, array_like, or dict, optional
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The color for each of the DataFrame's columns. Possible values are:
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- A single color string referred to by name, RGB or RGBA code,
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for instance 'red' or '#a98d19'.
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- A sequence of color strings referred to by name, RGB or RGBA
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code, which will be used for each column recursively. For
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instance ['green','yellow'] each column's %(kind)s will be filled in
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green or yellow, alternatively.
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- A dict of the form {column name : color}, so that each column will be
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colored accordingly. For example, if your columns are called `a` and
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`b`, then passing {'a': 'green', 'b': 'red'} will color %(kind)ss for
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column `a` in green and %(kind)ss for column `b` in red.
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.. versionadded:: 1.1.0
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||
|
|
||
|
**kwargs
|
||
|
Additional keyword arguments are documented in
|
||
|
:meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
matplotlib.axes.Axes or np.ndarray of them
|
||
|
An ndarray is returned with one :class:`matplotlib.axes.Axes`
|
||
|
per column when ``subplots=True``.
|
||
|
"""
|
||
|
|
||
|
|
||
|
@Substitution(backend="")
|
||
|
@Appender(_boxplot_doc)
|
||
|
def boxplot(
|
||
|
data,
|
||
|
column=None,
|
||
|
by=None,
|
||
|
ax=None,
|
||
|
fontsize=None,
|
||
|
rot=0,
|
||
|
grid=True,
|
||
|
figsize=None,
|
||
|
layout=None,
|
||
|
return_type=None,
|
||
|
**kwargs,
|
||
|
):
|
||
|
plot_backend = _get_plot_backend("matplotlib")
|
||
|
return plot_backend.boxplot(
|
||
|
data,
|
||
|
column=column,
|
||
|
by=by,
|
||
|
ax=ax,
|
||
|
fontsize=fontsize,
|
||
|
rot=rot,
|
||
|
grid=grid,
|
||
|
figsize=figsize,
|
||
|
layout=layout,
|
||
|
return_type=return_type,
|
||
|
**kwargs,
|
||
|
)
|
||
|
|
||
|
|
||
|
@Substitution(backend=_backend_doc)
|
||
|
@Appender(_boxplot_doc)
|
||
|
def boxplot_frame(
|
||
|
self,
|
||
|
column=None,
|
||
|
by=None,
|
||
|
ax=None,
|
||
|
fontsize=None,
|
||
|
rot=0,
|
||
|
grid=True,
|
||
|
figsize=None,
|
||
|
layout=None,
|
||
|
return_type=None,
|
||
|
backend=None,
|
||
|
**kwargs,
|
||
|
):
|
||
|
plot_backend = _get_plot_backend(backend)
|
||
|
return plot_backend.boxplot_frame(
|
||
|
self,
|
||
|
column=column,
|
||
|
by=by,
|
||
|
ax=ax,
|
||
|
fontsize=fontsize,
|
||
|
rot=rot,
|
||
|
grid=grid,
|
||
|
figsize=figsize,
|
||
|
layout=layout,
|
||
|
return_type=return_type,
|
||
|
**kwargs,
|
||
|
)
|
||
|
|
||
|
|
||
|
def boxplot_frame_groupby(
|
||
|
grouped,
|
||
|
subplots=True,
|
||
|
column=None,
|
||
|
fontsize=None,
|
||
|
rot=0,
|
||
|
grid=True,
|
||
|
ax=None,
|
||
|
figsize=None,
|
||
|
layout=None,
|
||
|
sharex=False,
|
||
|
sharey=True,
|
||
|
backend=None,
|
||
|
**kwargs,
|
||
|
):
|
||
|
"""
|
||
|
Make box plots from DataFrameGroupBy data.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
grouped : Grouped DataFrame
|
||
|
subplots : bool
|
||
|
* ``False`` - no subplots will be used
|
||
|
* ``True`` - create a subplot for each group.
|
||
|
|
||
|
column : column name or list of names, or vector
|
||
|
Can be any valid input to groupby.
|
||
|
fontsize : int or str
|
||
|
rot : label rotation angle
|
||
|
grid : Setting this to True will show the grid
|
||
|
ax : Matplotlib axis object, default None
|
||
|
figsize : A tuple (width, height) in inches
|
||
|
layout : tuple (optional)
|
||
|
The layout of the plot: (rows, columns).
|
||
|
sharex : bool, default False
|
||
|
Whether x-axes will be shared among subplots.
|
||
|
sharey : bool, default True
|
||
|
Whether y-axes will be shared among subplots.
|
||
|
backend : str, default None
|
||
|
Backend to use instead of the backend specified in the option
|
||
|
``plotting.backend``. For instance, 'matplotlib'. Alternatively, to
|
||
|
specify the ``plotting.backend`` for the whole session, set
|
||
|
``pd.options.plotting.backend``.
|
||
|
|
||
|
.. versionadded:: 1.0.0
|
||
|
|
||
|
**kwargs
|
||
|
All other plotting keyword arguments to be passed to
|
||
|
matplotlib's boxplot function.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
dict of key/value = group key/DataFrame.boxplot return value
|
||
|
or DataFrame.boxplot return value in case subplots=figures=False
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
You can create boxplots for grouped data and show them as separate subplots:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> import itertools
|
||
|
>>> tuples = [t for t in itertools.product(range(1000), range(4))]
|
||
|
>>> index = pd.MultiIndex.from_tuples(tuples, names=['lvl0', 'lvl1'])
|
||
|
>>> data = np.random.randn(len(index),4)
|
||
|
>>> df = pd.DataFrame(data, columns=list('ABCD'), index=index)
|
||
|
>>> grouped = df.groupby(level='lvl1')
|
||
|
>>> grouped.boxplot(rot=45, fontsize=12, figsize=(8,10))
|
||
|
|
||
|
The ``subplots=False`` option shows the boxplots in a single figure.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> grouped.boxplot(subplots=False, rot=45, fontsize=12)
|
||
|
"""
|
||
|
plot_backend = _get_plot_backend(backend)
|
||
|
return plot_backend.boxplot_frame_groupby(
|
||
|
grouped,
|
||
|
subplots=subplots,
|
||
|
column=column,
|
||
|
fontsize=fontsize,
|
||
|
rot=rot,
|
||
|
grid=grid,
|
||
|
ax=ax,
|
||
|
figsize=figsize,
|
||
|
layout=layout,
|
||
|
sharex=sharex,
|
||
|
sharey=sharey,
|
||
|
**kwargs,
|
||
|
)
|
||
|
|
||
|
|
||
|
class PlotAccessor(PandasObject):
|
||
|
"""
|
||
|
Make plots of Series or DataFrame.
|
||
|
|
||
|
Uses the backend specified by the
|
||
|
option ``plotting.backend``. By default, matplotlib is used.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
data : Series or DataFrame
|
||
|
The object for which the method is called.
|
||
|
x : label or position, default None
|
||
|
Only used if data is a DataFrame.
|
||
|
y : label, position or list of label, positions, default None
|
||
|
Allows plotting of one column versus another. Only used if data is a
|
||
|
DataFrame.
|
||
|
kind : str
|
||
|
The kind of plot to produce:
|
||
|
|
||
|
- 'line' : line plot (default)
|
||
|
- 'bar' : vertical bar plot
|
||
|
- 'barh' : horizontal bar plot
|
||
|
- 'hist' : histogram
|
||
|
- 'box' : boxplot
|
||
|
- 'kde' : Kernel Density Estimation plot
|
||
|
- 'density' : same as 'kde'
|
||
|
- 'area' : area plot
|
||
|
- 'pie' : pie plot
|
||
|
- 'scatter' : scatter plot
|
||
|
- 'hexbin' : hexbin plot.
|
||
|
ax : matplotlib axes object, default None
|
||
|
An axes of the current figure.
|
||
|
subplots : bool, default False
|
||
|
Make separate subplots for each column.
|
||
|
sharex : bool, default True if ax is None else False
|
||
|
In case ``subplots=True``, share x axis and set some x axis labels
|
||
|
to invisible; defaults to True if ax is None otherwise False if
|
||
|
an ax is passed in; Be aware, that passing in both an ax and
|
||
|
``sharex=True`` will alter all x axis labels for all axis in a figure.
|
||
|
sharey : bool, default False
|
||
|
In case ``subplots=True``, share y axis and set some y axis labels to invisible.
|
||
|
layout : tuple, optional
|
||
|
(rows, columns) for the layout of subplots.
|
||
|
figsize : a tuple (width, height) in inches
|
||
|
Size of a figure object.
|
||
|
use_index : bool, default True
|
||
|
Use index as ticks for x axis.
|
||
|
title : str or list
|
||
|
Title to use for the plot. If a string is passed, print the string
|
||
|
at the top of the figure. If a list is passed and `subplots` is
|
||
|
True, print each item in the list above the corresponding subplot.
|
||
|
grid : bool, default None (matlab style default)
|
||
|
Axis grid lines.
|
||
|
legend : bool or {'reverse'}
|
||
|
Place legend on axis subplots.
|
||
|
style : list or dict
|
||
|
The matplotlib line style per column.
|
||
|
logx : bool or 'sym', default False
|
||
|
Use log scaling or symlog scaling on x axis.
|
||
|
.. versionchanged:: 0.25.0
|
||
|
|
||
|
logy : bool or 'sym' default False
|
||
|
Use log scaling or symlog scaling on y axis.
|
||
|
.. versionchanged:: 0.25.0
|
||
|
|
||
|
loglog : bool or 'sym', default False
|
||
|
Use log scaling or symlog scaling on both x and y axes.
|
||
|
.. versionchanged:: 0.25.0
|
||
|
|
||
|
xticks : sequence
|
||
|
Values to use for the xticks.
|
||
|
yticks : sequence
|
||
|
Values to use for the yticks.
|
||
|
xlim : 2-tuple/list
|
||
|
Set the x limits of the current axes.
|
||
|
ylim : 2-tuple/list
|
||
|
Set the y limits of the current axes.
|
||
|
xlabel : label, optional
|
||
|
Name to use for the xlabel on x-axis. Default uses index name as xlabel, or the
|
||
|
x-column name for planar plots.
|
||
|
|
||
|
.. versionadded:: 1.1.0
|
||
|
|
||
|
.. versionchanged:: 1.2.0
|
||
|
|
||
|
Now applicable to planar plots (`scatter`, `hexbin`).
|
||
|
|
||
|
ylabel : label, optional
|
||
|
Name to use for the ylabel on y-axis. Default will show no ylabel, or the
|
||
|
y-column name for planar plots.
|
||
|
|
||
|
.. versionadded:: 1.1.0
|
||
|
|
||
|
.. versionchanged:: 1.2.0
|
||
|
|
||
|
Now applicable to planar plots (`scatter`, `hexbin`).
|
||
|
|
||
|
rot : int, default None
|
||
|
Rotation for ticks (xticks for vertical, yticks for horizontal
|
||
|
plots).
|
||
|
fontsize : int, default None
|
||
|
Font size for xticks and yticks.
|
||
|
colormap : str or matplotlib colormap object, default None
|
||
|
Colormap to select colors from. If string, load colormap with that
|
||
|
name from matplotlib.
|
||
|
colorbar : bool, optional
|
||
|
If True, plot colorbar (only relevant for 'scatter' and 'hexbin'
|
||
|
plots).
|
||
|
position : float
|
||
|
Specify relative alignments for bar plot layout.
|
||
|
From 0 (left/bottom-end) to 1 (right/top-end). Default is 0.5
|
||
|
(center).
|
||
|
table : bool, Series or DataFrame, default False
|
||
|
If True, draw a table using the data in the DataFrame and the data
|
||
|
will be transposed to meet matplotlib's default layout.
|
||
|
If a Series or DataFrame is passed, use passed data to draw a
|
||
|
table.
|
||
|
yerr : DataFrame, Series, array-like, dict and str
|
||
|
See :ref:`Plotting with Error Bars <visualization.errorbars>` for
|
||
|
detail.
|
||
|
xerr : DataFrame, Series, array-like, dict and str
|
||
|
Equivalent to yerr.
|
||
|
stacked : bool, default False in line and bar plots, and True in area plot
|
||
|
If True, create stacked plot.
|
||
|
sort_columns : bool, default False
|
||
|
Sort column names to determine plot ordering.
|
||
|
secondary_y : bool or sequence, default False
|
||
|
Whether to plot on the secondary y-axis if a list/tuple, which
|
||
|
columns to plot on secondary y-axis.
|
||
|
mark_right : bool, default True
|
||
|
When using a secondary_y axis, automatically mark the column
|
||
|
labels with "(right)" in the legend.
|
||
|
include_bool : bool, default is False
|
||
|
If True, boolean values can be plotted.
|
||
|
backend : str, default None
|
||
|
Backend to use instead of the backend specified in the option
|
||
|
``plotting.backend``. For instance, 'matplotlib'. Alternatively, to
|
||
|
specify the ``plotting.backend`` for the whole session, set
|
||
|
``pd.options.plotting.backend``.
|
||
|
|
||
|
.. versionadded:: 1.0.0
|
||
|
|
||
|
**kwargs
|
||
|
Options to pass to matplotlib plotting method.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
:class:`matplotlib.axes.Axes` or numpy.ndarray of them
|
||
|
If the backend is not the default matplotlib one, the return value
|
||
|
will be the object returned by the backend.
|
||
|
|
||
|
Notes
|
||
|
-----
|
||
|
- See matplotlib documentation online for more on this subject
|
||
|
- If `kind` = 'bar' or 'barh', you can specify relative alignments
|
||
|
for bar plot layout by `position` keyword.
|
||
|
From 0 (left/bottom-end) to 1 (right/top-end). Default is 0.5
|
||
|
(center)
|
||
|
"""
|
||
|
|
||
|
_common_kinds = ("line", "bar", "barh", "kde", "density", "area", "hist", "box")
|
||
|
_series_kinds = ("pie",)
|
||
|
_dataframe_kinds = ("scatter", "hexbin")
|
||
|
_kind_aliases = {"density": "kde"}
|
||
|
_all_kinds = _common_kinds + _series_kinds + _dataframe_kinds
|
||
|
|
||
|
def __init__(self, data):
|
||
|
self._parent = data
|
||
|
|
||
|
@staticmethod
|
||
|
def _get_call_args(backend_name, data, args, kwargs):
|
||
|
"""
|
||
|
This function makes calls to this accessor `__call__` method compatible
|
||
|
with the previous `SeriesPlotMethods.__call__` and
|
||
|
`DataFramePlotMethods.__call__`. Those had slightly different
|
||
|
signatures, since `DataFramePlotMethods` accepted `x` and `y`
|
||
|
parameters.
|
||
|
"""
|
||
|
if isinstance(data, ABCSeries):
|
||
|
arg_def = [
|
||
|
("kind", "line"),
|
||
|
("ax", None),
|
||
|
("figsize", None),
|
||
|
("use_index", True),
|
||
|
("title", None),
|
||
|
("grid", None),
|
||
|
("legend", False),
|
||
|
("style", None),
|
||
|
("logx", False),
|
||
|
("logy", False),
|
||
|
("loglog", False),
|
||
|
("xticks", None),
|
||
|
("yticks", None),
|
||
|
("xlim", None),
|
||
|
("ylim", None),
|
||
|
("rot", None),
|
||
|
("fontsize", None),
|
||
|
("colormap", None),
|
||
|
("table", False),
|
||
|
("yerr", None),
|
||
|
("xerr", None),
|
||
|
("label", None),
|
||
|
("secondary_y", False),
|
||
|
("xlabel", None),
|
||
|
("ylabel", None),
|
||
|
]
|
||
|
elif isinstance(data, ABCDataFrame):
|
||
|
arg_def = [
|
||
|
("x", None),
|
||
|
("y", None),
|
||
|
("kind", "line"),
|
||
|
("ax", None),
|
||
|
("subplots", False),
|
||
|
("sharex", None),
|
||
|
("sharey", False),
|
||
|
("layout", None),
|
||
|
("figsize", None),
|
||
|
("use_index", True),
|
||
|
("title", None),
|
||
|
("grid", None),
|
||
|
("legend", True),
|
||
|
("style", None),
|
||
|
("logx", False),
|
||
|
("logy", False),
|
||
|
("loglog", False),
|
||
|
("xticks", None),
|
||
|
("yticks", None),
|
||
|
("xlim", None),
|
||
|
("ylim", None),
|
||
|
("rot", None),
|
||
|
("fontsize", None),
|
||
|
("colormap", None),
|
||
|
("table", False),
|
||
|
("yerr", None),
|
||
|
("xerr", None),
|
||
|
("secondary_y", False),
|
||
|
("sort_columns", False),
|
||
|
("xlabel", None),
|
||
|
("ylabel", None),
|
||
|
]
|
||
|
else:
|
||
|
raise TypeError(
|
||
|
f"Called plot accessor for type {type(data).__name__}, "
|
||
|
"expected Series or DataFrame"
|
||
|
)
|
||
|
|
||
|
if args and isinstance(data, ABCSeries):
|
||
|
positional_args = str(args)[1:-1]
|
||
|
keyword_args = ", ".join(
|
||
|
f"{name}={repr(value)}" for (name, default), value in zip(arg_def, args)
|
||
|
)
|
||
|
msg = (
|
||
|
"`Series.plot()` should not be called with positional "
|
||
|
"arguments, only keyword arguments. The order of "
|
||
|
"positional arguments will change in the future. "
|
||
|
f"Use `Series.plot({keyword_args})` instead of "
|
||
|
f"`Series.plot({positional_args})`."
|
||
|
)
|
||
|
raise TypeError(msg)
|
||
|
|
||
|
pos_args = {name: value for value, (name, _) in zip(args, arg_def)}
|
||
|
if backend_name == "pandas.plotting._matplotlib":
|
||
|
kwargs = dict(arg_def, **pos_args, **kwargs)
|
||
|
else:
|
||
|
kwargs = dict(pos_args, **kwargs)
|
||
|
|
||
|
x = kwargs.pop("x", None)
|
||
|
y = kwargs.pop("y", None)
|
||
|
kind = kwargs.pop("kind", "line")
|
||
|
return x, y, kind, kwargs
|
||
|
|
||
|
def __call__(self, *args, **kwargs):
|
||
|
plot_backend = _get_plot_backend(kwargs.pop("backend", None))
|
||
|
|
||
|
x, y, kind, kwargs = self._get_call_args(
|
||
|
plot_backend.__name__, self._parent, args, kwargs
|
||
|
)
|
||
|
|
||
|
kind = self._kind_aliases.get(kind, kind)
|
||
|
|
||
|
# when using another backend, get out of the way
|
||
|
if plot_backend.__name__ != "pandas.plotting._matplotlib":
|
||
|
return plot_backend.plot(self._parent, x=x, y=y, kind=kind, **kwargs)
|
||
|
|
||
|
if kind not in self._all_kinds:
|
||
|
raise ValueError(f"{kind} is not a valid plot kind")
|
||
|
|
||
|
# The original data structured can be transformed before passed to the
|
||
|
# backend. For example, for DataFrame is common to set the index as the
|
||
|
# `x` parameter, and return a Series with the parameter `y` as values.
|
||
|
data = self._parent.copy()
|
||
|
|
||
|
if isinstance(data, ABCSeries):
|
||
|
kwargs["reuse_plot"] = True
|
||
|
|
||
|
if kind in self._dataframe_kinds:
|
||
|
if isinstance(data, ABCDataFrame):
|
||
|
return plot_backend.plot(data, x=x, y=y, kind=kind, **kwargs)
|
||
|
else:
|
||
|
raise ValueError(f"plot kind {kind} can only be used for data frames")
|
||
|
elif kind in self._series_kinds:
|
||
|
if isinstance(data, ABCDataFrame):
|
||
|
if y is None and kwargs.get("subplots") is False:
|
||
|
raise ValueError(
|
||
|
f"{kind} requires either y column or 'subplots=True'"
|
||
|
)
|
||
|
elif y is not None:
|
||
|
if is_integer(y) and not data.columns.holds_integer():
|
||
|
y = data.columns[y]
|
||
|
# converted to series actually. copy to not modify
|
||
|
data = data[y].copy()
|
||
|
data.index.name = y
|
||
|
elif isinstance(data, ABCDataFrame):
|
||
|
data_cols = data.columns
|
||
|
if x is not None:
|
||
|
if is_integer(x) and not data.columns.holds_integer():
|
||
|
x = data_cols[x]
|
||
|
elif not isinstance(data[x], ABCSeries):
|
||
|
raise ValueError("x must be a label or position")
|
||
|
data = data.set_index(x)
|
||
|
if y is not None:
|
||
|
# check if we have y as int or list of ints
|
||
|
int_ylist = is_list_like(y) and all(is_integer(c) for c in y)
|
||
|
int_y_arg = is_integer(y) or int_ylist
|
||
|
if int_y_arg and not data.columns.holds_integer():
|
||
|
y = data_cols[y]
|
||
|
|
||
|
label_kw = kwargs["label"] if "label" in kwargs else False
|
||
|
for kw in ["xerr", "yerr"]:
|
||
|
if kw in kwargs and (
|
||
|
isinstance(kwargs[kw], str) or is_integer(kwargs[kw])
|
||
|
):
|
||
|
try:
|
||
|
kwargs[kw] = data[kwargs[kw]]
|
||
|
except (IndexError, KeyError, TypeError):
|
||
|
pass
|
||
|
|
||
|
# don't overwrite
|
||
|
data = data[y].copy()
|
||
|
|
||
|
if isinstance(data, ABCSeries):
|
||
|
label_name = label_kw or y
|
||
|
data.name = label_name
|
||
|
else:
|
||
|
match = is_list_like(label_kw) and len(label_kw) == len(y)
|
||
|
if label_kw and not match:
|
||
|
raise ValueError(
|
||
|
"label should be list-like and same length as y"
|
||
|
)
|
||
|
label_name = label_kw or data.columns
|
||
|
data.columns = label_name
|
||
|
|
||
|
return plot_backend.plot(data, kind=kind, **kwargs)
|
||
|
|
||
|
__call__.__doc__ = __doc__
|
||
|
|
||
|
@Appender(
|
||
|
"""
|
||
|
See Also
|
||
|
--------
|
||
|
matplotlib.pyplot.plot : Plot y versus x as lines and/or markers.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> s = pd.Series([1, 3, 2])
|
||
|
>>> s.plot.line()
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
The following example shows the populations for some animals
|
||
|
over the years.
|
||
|
|
||
|
>>> df = pd.DataFrame({
|
||
|
... 'pig': [20, 18, 489, 675, 1776],
|
||
|
... 'horse': [4, 25, 281, 600, 1900]
|
||
|
... }, index=[1990, 1997, 2003, 2009, 2014])
|
||
|
>>> lines = df.plot.line()
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
An example with subplots, so an array of axes is returned.
|
||
|
|
||
|
>>> axes = df.plot.line(subplots=True)
|
||
|
>>> type(axes)
|
||
|
<class 'numpy.ndarray'>
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
Let's repeat the same example, but specifying colors for
|
||
|
each column (in this case, for each animal).
|
||
|
|
||
|
>>> axes = df.plot.line(
|
||
|
... subplots=True, color={"pig": "pink", "horse": "#742802"}
|
||
|
... )
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
The following example shows the relationship between both
|
||
|
populations.
|
||
|
|
||
|
>>> lines = df.plot.line(x='pig', y='horse')
|
||
|
"""
|
||
|
)
|
||
|
@Substitution(kind="line")
|
||
|
@Appender(_bar_or_line_doc)
|
||
|
def line(self, x=None, y=None, **kwargs):
|
||
|
"""
|
||
|
Plot Series or DataFrame as lines.
|
||
|
|
||
|
This function is useful to plot lines using DataFrame's values
|
||
|
as coordinates.
|
||
|
"""
|
||
|
return self(kind="line", x=x, y=y, **kwargs)
|
||
|
|
||
|
@Appender(
|
||
|
"""
|
||
|
See Also
|
||
|
--------
|
||
|
DataFrame.plot.barh : Horizontal bar plot.
|
||
|
DataFrame.plot : Make plots of a DataFrame.
|
||
|
matplotlib.pyplot.bar : Make a bar plot with matplotlib.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
Basic plot.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame({'lab':['A', 'B', 'C'], 'val':[10, 30, 20]})
|
||
|
>>> ax = df.plot.bar(x='lab', y='val', rot=0)
|
||
|
|
||
|
Plot a whole dataframe to a bar plot. Each column is assigned a
|
||
|
distinct color, and each row is nested in a group along the
|
||
|
horizontal axis.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> speed = [0.1, 17.5, 40, 48, 52, 69, 88]
|
||
|
>>> lifespan = [2, 8, 70, 1.5, 25, 12, 28]
|
||
|
>>> index = ['snail', 'pig', 'elephant',
|
||
|
... 'rabbit', 'giraffe', 'coyote', 'horse']
|
||
|
>>> df = pd.DataFrame({'speed': speed,
|
||
|
... 'lifespan': lifespan}, index=index)
|
||
|
>>> ax = df.plot.bar(rot=0)
|
||
|
|
||
|
Plot stacked bar charts for the DataFrame
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.bar(stacked=True)
|
||
|
|
||
|
Instead of nesting, the figure can be split by column with
|
||
|
``subplots=True``. In this case, a :class:`numpy.ndarray` of
|
||
|
:class:`matplotlib.axes.Axes` are returned.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> axes = df.plot.bar(rot=0, subplots=True)
|
||
|
>>> axes[1].legend(loc=2) # doctest: +SKIP
|
||
|
|
||
|
If you don't like the default colours, you can specify how you'd
|
||
|
like each column to be colored.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> axes = df.plot.bar(
|
||
|
... rot=0, subplots=True, color={"speed": "red", "lifespan": "green"}
|
||
|
... )
|
||
|
>>> axes[1].legend(loc=2) # doctest: +SKIP
|
||
|
|
||
|
Plot a single column.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.bar(y='speed', rot=0)
|
||
|
|
||
|
Plot only selected categories for the DataFrame.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.bar(x='lifespan', rot=0)
|
||
|
"""
|
||
|
)
|
||
|
@Substitution(kind="bar")
|
||
|
@Appender(_bar_or_line_doc)
|
||
|
def bar(self, x=None, y=None, **kwargs):
|
||
|
"""
|
||
|
Vertical bar plot.
|
||
|
|
||
|
A bar plot is a plot that presents categorical data with
|
||
|
rectangular bars with lengths proportional to the values that they
|
||
|
represent. A bar plot shows comparisons among discrete categories. One
|
||
|
axis of the plot shows the specific categories being compared, and the
|
||
|
other axis represents a measured value.
|
||
|
"""
|
||
|
return self(kind="bar", x=x, y=y, **kwargs)
|
||
|
|
||
|
@Appender(
|
||
|
"""
|
||
|
See Also
|
||
|
--------
|
||
|
DataFrame.plot.bar: Vertical bar plot.
|
||
|
DataFrame.plot : Make plots of DataFrame using matplotlib.
|
||
|
matplotlib.axes.Axes.bar : Plot a vertical bar plot using matplotlib.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
Basic example
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame({'lab': ['A', 'B', 'C'], 'val': [10, 30, 20]})
|
||
|
>>> ax = df.plot.barh(x='lab', y='val')
|
||
|
|
||
|
Plot a whole DataFrame to a horizontal bar plot
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> speed = [0.1, 17.5, 40, 48, 52, 69, 88]
|
||
|
>>> lifespan = [2, 8, 70, 1.5, 25, 12, 28]
|
||
|
>>> index = ['snail', 'pig', 'elephant',
|
||
|
... 'rabbit', 'giraffe', 'coyote', 'horse']
|
||
|
>>> df = pd.DataFrame({'speed': speed,
|
||
|
... 'lifespan': lifespan}, index=index)
|
||
|
>>> ax = df.plot.barh()
|
||
|
|
||
|
Plot stacked barh charts for the DataFrame
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.barh(stacked=True)
|
||
|
|
||
|
We can specify colors for each column
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.barh(color={"speed": "red", "lifespan": "green"})
|
||
|
|
||
|
Plot a column of the DataFrame to a horizontal bar plot
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> speed = [0.1, 17.5, 40, 48, 52, 69, 88]
|
||
|
>>> lifespan = [2, 8, 70, 1.5, 25, 12, 28]
|
||
|
>>> index = ['snail', 'pig', 'elephant',
|
||
|
... 'rabbit', 'giraffe', 'coyote', 'horse']
|
||
|
>>> df = pd.DataFrame({'speed': speed,
|
||
|
... 'lifespan': lifespan}, index=index)
|
||
|
>>> ax = df.plot.barh(y='speed')
|
||
|
|
||
|
Plot DataFrame versus the desired column
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> speed = [0.1, 17.5, 40, 48, 52, 69, 88]
|
||
|
>>> lifespan = [2, 8, 70, 1.5, 25, 12, 28]
|
||
|
>>> index = ['snail', 'pig', 'elephant',
|
||
|
... 'rabbit', 'giraffe', 'coyote', 'horse']
|
||
|
>>> df = pd.DataFrame({'speed': speed,
|
||
|
... 'lifespan': lifespan}, index=index)
|
||
|
>>> ax = df.plot.barh(x='lifespan')
|
||
|
"""
|
||
|
)
|
||
|
@Substitution(kind="bar")
|
||
|
@Appender(_bar_or_line_doc)
|
||
|
def barh(self, x=None, y=None, **kwargs):
|
||
|
"""
|
||
|
Make a horizontal bar plot.
|
||
|
|
||
|
A horizontal bar plot is a plot that presents quantitative data with
|
||
|
rectangular bars with lengths proportional to the values that they
|
||
|
represent. A bar plot shows comparisons among discrete categories. One
|
||
|
axis of the plot shows the specific categories being compared, and the
|
||
|
other axis represents a measured value.
|
||
|
"""
|
||
|
return self(kind="barh", x=x, y=y, **kwargs)
|
||
|
|
||
|
def box(self, by=None, **kwargs):
|
||
|
r"""
|
||
|
Make a box plot of the DataFrame columns.
|
||
|
|
||
|
A box plot is a method for graphically depicting groups of numerical
|
||
|
data through their quartiles.
|
||
|
The box extends from the Q1 to Q3 quartile values of the data,
|
||
|
with a line at the median (Q2). The whiskers extend from the edges
|
||
|
of box to show the range of the data. The position of the whiskers
|
||
|
is set by default to 1.5*IQR (IQR = Q3 - Q1) from the edges of the
|
||
|
box. Outlier points are those past the end of the whiskers.
|
||
|
|
||
|
For further details see Wikipedia's
|
||
|
entry for `boxplot <https://en.wikipedia.org/wiki/Box_plot>`__.
|
||
|
|
||
|
A consideration when using this chart is that the box and the whiskers
|
||
|
can overlap, which is very common when plotting small sets of data.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
by : str or sequence
|
||
|
Column in the DataFrame to group by.
|
||
|
**kwargs
|
||
|
Additional keywords are documented in
|
||
|
:meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
:class:`matplotlib.axes.Axes` or numpy.ndarray of them
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
DataFrame.boxplot: Another method to draw a box plot.
|
||
|
Series.plot.box: Draw a box plot from a Series object.
|
||
|
matplotlib.pyplot.boxplot: Draw a box plot in matplotlib.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
Draw a box plot from a DataFrame with four columns of randomly
|
||
|
generated data.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> data = np.random.randn(25, 4)
|
||
|
>>> df = pd.DataFrame(data, columns=list('ABCD'))
|
||
|
>>> ax = df.plot.box()
|
||
|
"""
|
||
|
return self(kind="box", by=by, **kwargs)
|
||
|
|
||
|
def hist(self, by=None, bins=10, **kwargs):
|
||
|
"""
|
||
|
Draw one histogram of the DataFrame's columns.
|
||
|
|
||
|
A histogram is a representation of the distribution of data.
|
||
|
This function groups the values of all given Series in the DataFrame
|
||
|
into bins and draws all bins in one :class:`matplotlib.axes.Axes`.
|
||
|
This is useful when the DataFrame's Series are in a similar scale.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
by : str or sequence, optional
|
||
|
Column in the DataFrame to group by.
|
||
|
bins : int, default 10
|
||
|
Number of histogram bins to be used.
|
||
|
**kwargs
|
||
|
Additional keyword arguments are documented in
|
||
|
:meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
class:`matplotlib.AxesSubplot`
|
||
|
Return a histogram plot.
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
DataFrame.hist : Draw histograms per DataFrame's Series.
|
||
|
Series.hist : Draw a histogram with Series' data.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
When we draw a dice 6000 times, we expect to get each value around 1000
|
||
|
times. But when we draw two dices and sum the result, the distribution
|
||
|
is going to be quite different. A histogram illustrates those
|
||
|
distributions.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame(
|
||
|
... np.random.randint(1, 7, 6000),
|
||
|
... columns = ['one'])
|
||
|
>>> df['two'] = df['one'] + np.random.randint(1, 7, 6000)
|
||
|
>>> ax = df.plot.hist(bins=12, alpha=0.5)
|
||
|
"""
|
||
|
return self(kind="hist", by=by, bins=bins, **kwargs)
|
||
|
|
||
|
def kde(self, bw_method=None, ind=None, **kwargs):
|
||
|
"""
|
||
|
Generate Kernel Density Estimate plot using Gaussian kernels.
|
||
|
|
||
|
In statistics, `kernel density estimation`_ (KDE) is a non-parametric
|
||
|
way to estimate the probability density function (PDF) of a random
|
||
|
variable. This function uses Gaussian kernels and includes automatic
|
||
|
bandwidth determination.
|
||
|
|
||
|
.. _kernel density estimation:
|
||
|
https://en.wikipedia.org/wiki/Kernel_density_estimation
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
bw_method : str, scalar or callable, optional
|
||
|
The method used to calculate the estimator bandwidth. This can be
|
||
|
'scott', 'silverman', a scalar constant or a callable.
|
||
|
If None (default), 'scott' is used.
|
||
|
See :class:`scipy.stats.gaussian_kde` for more information.
|
||
|
ind : NumPy array or int, optional
|
||
|
Evaluation points for the estimated PDF. If None (default),
|
||
|
1000 equally spaced points are used. If `ind` is a NumPy array, the
|
||
|
KDE is evaluated at the points passed. If `ind` is an integer,
|
||
|
`ind` number of equally spaced points are used.
|
||
|
**kwargs
|
||
|
Additional keyword arguments are documented in
|
||
|
:meth:`pandas.%(this-datatype)s.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
matplotlib.axes.Axes or numpy.ndarray of them
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
scipy.stats.gaussian_kde : Representation of a kernel-density
|
||
|
estimate using Gaussian kernels. This is the function used
|
||
|
internally to estimate the PDF.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
Given a Series of points randomly sampled from an unknown
|
||
|
distribution, estimate its PDF using KDE with automatic
|
||
|
bandwidth determination and plot the results, evaluating them at
|
||
|
1000 equally spaced points (default):
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> s = pd.Series([1, 2, 2.5, 3, 3.5, 4, 5])
|
||
|
>>> ax = s.plot.kde()
|
||
|
|
||
|
A scalar bandwidth can be specified. Using a small bandwidth value can
|
||
|
lead to over-fitting, while using a large bandwidth value may result
|
||
|
in under-fitting:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = s.plot.kde(bw_method=0.3)
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = s.plot.kde(bw_method=3)
|
||
|
|
||
|
Finally, the `ind` parameter determines the evaluation points for the
|
||
|
plot of the estimated PDF:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = s.plot.kde(ind=[1, 2, 3, 4, 5])
|
||
|
|
||
|
For DataFrame, it works in the same way:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame({
|
||
|
... 'x': [1, 2, 2.5, 3, 3.5, 4, 5],
|
||
|
... 'y': [4, 4, 4.5, 5, 5.5, 6, 6],
|
||
|
... })
|
||
|
>>> ax = df.plot.kde()
|
||
|
|
||
|
A scalar bandwidth can be specified. Using a small bandwidth value can
|
||
|
lead to over-fitting, while using a large bandwidth value may result
|
||
|
in under-fitting:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.kde(bw_method=0.3)
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.kde(bw_method=3)
|
||
|
|
||
|
Finally, the `ind` parameter determines the evaluation points for the
|
||
|
plot of the estimated PDF:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.kde(ind=[1, 2, 3, 4, 5, 6])
|
||
|
"""
|
||
|
return self(kind="kde", bw_method=bw_method, ind=ind, **kwargs)
|
||
|
|
||
|
density = kde
|
||
|
|
||
|
def area(self, x=None, y=None, **kwargs):
|
||
|
"""
|
||
|
Draw a stacked area plot.
|
||
|
|
||
|
An area plot displays quantitative data visually.
|
||
|
This function wraps the matplotlib area function.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
x : label or position, optional
|
||
|
Coordinates for the X axis. By default uses the index.
|
||
|
y : label or position, optional
|
||
|
Column to plot. By default uses all columns.
|
||
|
stacked : bool, default True
|
||
|
Area plots are stacked by default. Set to False to create a
|
||
|
unstacked plot.
|
||
|
**kwargs
|
||
|
Additional keyword arguments are documented in
|
||
|
:meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
matplotlib.axes.Axes or numpy.ndarray
|
||
|
Area plot, or array of area plots if subplots is True.
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
DataFrame.plot : Make plots of DataFrame using matplotlib / pylab.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
Draw an area plot based on basic business metrics:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame({
|
||
|
... 'sales': [3, 2, 3, 9, 10, 6],
|
||
|
... 'signups': [5, 5, 6, 12, 14, 13],
|
||
|
... 'visits': [20, 42, 28, 62, 81, 50],
|
||
|
... }, index=pd.date_range(start='2018/01/01', end='2018/07/01',
|
||
|
... freq='M'))
|
||
|
>>> ax = df.plot.area()
|
||
|
|
||
|
Area plots are stacked by default. To produce an unstacked plot,
|
||
|
pass ``stacked=False``:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.area(stacked=False)
|
||
|
|
||
|
Draw an area plot for a single column:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax = df.plot.area(y='sales')
|
||
|
|
||
|
Draw with a different `x`:
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame({
|
||
|
... 'sales': [3, 2, 3],
|
||
|
... 'visits': [20, 42, 28],
|
||
|
... 'day': [1, 2, 3],
|
||
|
... })
|
||
|
>>> ax = df.plot.area(x='day')
|
||
|
"""
|
||
|
return self(kind="area", x=x, y=y, **kwargs)
|
||
|
|
||
|
def pie(self, **kwargs):
|
||
|
"""
|
||
|
Generate a pie plot.
|
||
|
|
||
|
A pie plot is a proportional representation of the numerical data in a
|
||
|
column. This function wraps :meth:`matplotlib.pyplot.pie` for the
|
||
|
specified column. If no column reference is passed and
|
||
|
``subplots=True`` a pie plot is drawn for each numerical column
|
||
|
independently.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
y : int or label, optional
|
||
|
Label or position of the column to plot.
|
||
|
If not provided, ``subplots=True`` argument must be passed.
|
||
|
**kwargs
|
||
|
Keyword arguments to pass on to :meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
matplotlib.axes.Axes or np.ndarray of them
|
||
|
A NumPy array is returned when `subplots` is True.
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
Series.plot.pie : Generate a pie plot for a Series.
|
||
|
DataFrame.plot : Make plots of a DataFrame.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
In the example below we have a DataFrame with the information about
|
||
|
planet's mass and radius. We pass the 'mass' column to the
|
||
|
pie function to get a pie plot.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame({'mass': [0.330, 4.87 , 5.97],
|
||
|
... 'radius': [2439.7, 6051.8, 6378.1]},
|
||
|
... index=['Mercury', 'Venus', 'Earth'])
|
||
|
>>> plot = df.plot.pie(y='mass', figsize=(5, 5))
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> plot = df.plot.pie(subplots=True, figsize=(11, 6))
|
||
|
"""
|
||
|
if (
|
||
|
isinstance(self._parent, ABCDataFrame)
|
||
|
and kwargs.get("y", None) is None
|
||
|
and not kwargs.get("subplots", False)
|
||
|
):
|
||
|
raise ValueError("pie requires either y column or 'subplots=True'")
|
||
|
return self(kind="pie", **kwargs)
|
||
|
|
||
|
def scatter(self, x, y, s=None, c=None, **kwargs):
|
||
|
"""
|
||
|
Create a scatter plot with varying marker point size and color.
|
||
|
|
||
|
The coordinates of each point are defined by two dataframe columns and
|
||
|
filled circles are used to represent each point. This kind of plot is
|
||
|
useful to see complex correlations between two variables. Points could
|
||
|
be for instance natural 2D coordinates like longitude and latitude in
|
||
|
a map or, in general, any pair of metrics that can be plotted against
|
||
|
each other.
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
x : int or str
|
||
|
The column name or column position to be used as horizontal
|
||
|
coordinates for each point.
|
||
|
y : int or str
|
||
|
The column name or column position to be used as vertical
|
||
|
coordinates for each point.
|
||
|
s : str, scalar or array_like, optional
|
||
|
The size of each point. Possible values are:
|
||
|
|
||
|
- A string with the name of the column to be used for marker's size.
|
||
|
|
||
|
- A single scalar so all points have the same size.
|
||
|
|
||
|
- A sequence of scalars, which will be used for each point's size
|
||
|
recursively. For instance, when passing [2,14] all points size
|
||
|
will be either 2 or 14, alternatively.
|
||
|
|
||
|
.. versionchanged:: 1.1.0
|
||
|
|
||
|
c : str, int or array_like, optional
|
||
|
The color of each point. Possible values are:
|
||
|
|
||
|
- A single color string referred to by name, RGB or RGBA code,
|
||
|
for instance 'red' or '#a98d19'.
|
||
|
|
||
|
- A sequence of color strings referred to by name, RGB or RGBA
|
||
|
code, which will be used for each point's color recursively. For
|
||
|
instance ['green','yellow'] all points will be filled in green or
|
||
|
yellow, alternatively.
|
||
|
|
||
|
- A column name or position whose values will be used to color the
|
||
|
marker points according to a colormap.
|
||
|
|
||
|
**kwargs
|
||
|
Keyword arguments to pass on to :meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
:class:`matplotlib.axes.Axes` or numpy.ndarray of them
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
matplotlib.pyplot.scatter : Scatter plot using multiple input data
|
||
|
formats.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
Let's see how to draw a scatter plot using coordinates from the values
|
||
|
in a DataFrame's columns.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> df = pd.DataFrame([[5.1, 3.5, 0], [4.9, 3.0, 0], [7.0, 3.2, 1],
|
||
|
... [6.4, 3.2, 1], [5.9, 3.0, 2]],
|
||
|
... columns=['length', 'width', 'species'])
|
||
|
>>> ax1 = df.plot.scatter(x='length',
|
||
|
... y='width',
|
||
|
... c='DarkBlue')
|
||
|
|
||
|
And now with the color determined by a column as well.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> ax2 = df.plot.scatter(x='length',
|
||
|
... y='width',
|
||
|
... c='species',
|
||
|
... colormap='viridis')
|
||
|
"""
|
||
|
return self(kind="scatter", x=x, y=y, s=s, c=c, **kwargs)
|
||
|
|
||
|
def hexbin(self, x, y, C=None, reduce_C_function=None, gridsize=None, **kwargs):
|
||
|
"""
|
||
|
Generate a hexagonal binning plot.
|
||
|
|
||
|
Generate a hexagonal binning plot of `x` versus `y`. If `C` is `None`
|
||
|
(the default), this is a histogram of the number of occurrences
|
||
|
of the observations at ``(x[i], y[i])``.
|
||
|
|
||
|
If `C` is specified, specifies values at given coordinates
|
||
|
``(x[i], y[i])``. These values are accumulated for each hexagonal
|
||
|
bin and then reduced according to `reduce_C_function`,
|
||
|
having as default the NumPy's mean function (:meth:`numpy.mean`).
|
||
|
(If `C` is specified, it must also be a 1-D sequence
|
||
|
of the same length as `x` and `y`, or a column label.)
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
x : int or str
|
||
|
The column label or position for x points.
|
||
|
y : int or str
|
||
|
The column label or position for y points.
|
||
|
C : int or str, optional
|
||
|
The column label or position for the value of `(x, y)` point.
|
||
|
reduce_C_function : callable, default `np.mean`
|
||
|
Function of one argument that reduces all the values in a bin to
|
||
|
a single number (e.g. `np.mean`, `np.max`, `np.sum`, `np.std`).
|
||
|
gridsize : int or tuple of (int, int), default 100
|
||
|
The number of hexagons in the x-direction.
|
||
|
The corresponding number of hexagons in the y-direction is
|
||
|
chosen in a way that the hexagons are approximately regular.
|
||
|
Alternatively, gridsize can be a tuple with two elements
|
||
|
specifying the number of hexagons in the x-direction and the
|
||
|
y-direction.
|
||
|
**kwargs
|
||
|
Additional keyword arguments are documented in
|
||
|
:meth:`DataFrame.plot`.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
matplotlib.AxesSubplot
|
||
|
The matplotlib ``Axes`` on which the hexbin is plotted.
|
||
|
|
||
|
See Also
|
||
|
--------
|
||
|
DataFrame.plot : Make plots of a DataFrame.
|
||
|
matplotlib.pyplot.hexbin : Hexagonal binning plot using matplotlib,
|
||
|
the matplotlib function that is used under the hood.
|
||
|
|
||
|
Examples
|
||
|
--------
|
||
|
The following examples are generated with random data from
|
||
|
a normal distribution.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> n = 10000
|
||
|
>>> df = pd.DataFrame({'x': np.random.randn(n),
|
||
|
... 'y': np.random.randn(n)})
|
||
|
>>> ax = df.plot.hexbin(x='x', y='y', gridsize=20)
|
||
|
|
||
|
The next example uses `C` and `np.sum` as `reduce_C_function`.
|
||
|
Note that `'observations'` values ranges from 1 to 5 but the result
|
||
|
plot shows values up to more than 25. This is because of the
|
||
|
`reduce_C_function`.
|
||
|
|
||
|
.. plot::
|
||
|
:context: close-figs
|
||
|
|
||
|
>>> n = 500
|
||
|
>>> df = pd.DataFrame({
|
||
|
... 'coord_x': np.random.uniform(-3, 3, size=n),
|
||
|
... 'coord_y': np.random.uniform(30, 50, size=n),
|
||
|
... 'observations': np.random.randint(1,5, size=n)
|
||
|
... })
|
||
|
>>> ax = df.plot.hexbin(x='coord_x',
|
||
|
... y='coord_y',
|
||
|
... C='observations',
|
||
|
... reduce_C_function=np.sum,
|
||
|
... gridsize=10,
|
||
|
... cmap="viridis")
|
||
|
"""
|
||
|
if reduce_C_function is not None:
|
||
|
kwargs["reduce_C_function"] = reduce_C_function
|
||
|
if gridsize is not None:
|
||
|
kwargs["gridsize"] = gridsize
|
||
|
|
||
|
return self(kind="hexbin", x=x, y=y, C=C, **kwargs)
|
||
|
|
||
|
|
||
|
_backends = {}
|
||
|
|
||
|
|
||
|
def _find_backend(backend: str):
|
||
|
"""
|
||
|
Find a pandas plotting backend>
|
||
|
|
||
|
Parameters
|
||
|
----------
|
||
|
backend : str
|
||
|
The identifier for the backend. Either an entrypoint item registered
|
||
|
with pkg_resources, or a module name.
|
||
|
|
||
|
Notes
|
||
|
-----
|
||
|
Modifies _backends with imported backends as a side effect.
|
||
|
|
||
|
Returns
|
||
|
-------
|
||
|
types.ModuleType
|
||
|
The imported backend.
|
||
|
"""
|
||
|
import pkg_resources # Delay import for performance.
|
||
|
|
||
|
for entry_point in pkg_resources.iter_entry_points("pandas_plotting_backends"):
|
||
|
if entry_point.name == "matplotlib":
|
||
|
# matplotlib is an optional dependency. When
|
||
|
# missing, this would raise.
|
||
|
continue
|
||
|
_backends[entry_point.name] = entry_point.load()
|
||
|
|
||
|
try:
|
||
|
return _backends[backend]
|
||
|
except KeyError:
|
||
|
# Fall back to unregistered, module name approach.
|
||
|
try:
|
||
|
module = importlib.import_module(backend)
|
||
|
except ImportError:
|
||
|
# We re-raise later on.
|
||
|
pass
|
||
|
else:
|
||
|
if hasattr(module, "plot"):
|
||
|
# Validate that the interface is implemented when the option
|
||
|
# is set, rather than at plot time.
|
||
|
_backends[backend] = module
|
||
|
return module
|
||
|
|
||
|
raise ValueError(
|
||
|
f"Could not find plotting backend '{backend}'. Ensure that you've installed "
|
||
|
f"the package providing the '{backend}' entrypoint, or that the package has a "
|
||
|
"top-level `.plot` method."
|
||
|
)
|
||
|
|
||
|
|
||
|
def _get_plot_backend(backend=None):
|
||
|
"""
|
||
|
Return the plotting backend to use (e.g. `pandas.plotting._matplotlib`).
|
||
|
|
||
|
The plotting system of pandas has been using matplotlib, but the idea here
|
||
|
is that it can also work with other third-party backends. In the future,
|
||
|
this function will return the backend from a pandas option, and all the
|
||
|
rest of the code in this file will use the backend specified there for the
|
||
|
plotting.
|
||
|
|
||
|
The backend is imported lazily, as matplotlib is a soft dependency, and
|
||
|
pandas can be used without it being installed.
|
||
|
"""
|
||
|
backend = backend or get_option("plotting.backend")
|
||
|
|
||
|
if backend == "matplotlib":
|
||
|
# Because matplotlib is an optional dependency and first-party backend,
|
||
|
# we need to attempt an import here to raise an ImportError if needed.
|
||
|
try:
|
||
|
import pandas.plotting._matplotlib as module
|
||
|
except ImportError:
|
||
|
raise ImportError(
|
||
|
"matplotlib is required for plotting when the "
|
||
|
'default backend "matplotlib" is selected.'
|
||
|
) from None
|
||
|
|
||
|
_backends["matplotlib"] = module
|
||
|
|
||
|
if backend in _backends:
|
||
|
return _backends[backend]
|
||
|
|
||
|
module = _find_backend(backend)
|
||
|
_backends[backend] = module
|
||
|
return module
|