projektAI/venv/Lib/site-packages/pandas/tests/groupby/aggregate/test_other.py

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"""
test all other .agg behavior
"""
import datetime as dt
from functools import partial
import numpy as np
import pytest
import pandas as pd
from pandas import (
DataFrame,
Index,
MultiIndex,
PeriodIndex,
Series,
date_range,
period_range,
)
import pandas._testing as tm
from pandas.core.base import SpecificationError
from pandas.io.formats.printing import pprint_thing
def test_agg_api():
# GH 6337
# https://stackoverflow.com/questions/21706030/pandas-groupby-agg-function-column-dtype-error
# different api for agg when passed custom function with mixed frame
df = DataFrame(
{
"data1": np.random.randn(5),
"data2": np.random.randn(5),
"key1": ["a", "a", "b", "b", "a"],
"key2": ["one", "two", "one", "two", "one"],
}
)
grouped = df.groupby("key1")
def peak_to_peak(arr):
return arr.max() - arr.min()
expected = grouped.agg([peak_to_peak])
expected.columns = ["data1", "data2"]
result = grouped.agg(peak_to_peak)
tm.assert_frame_equal(result, expected)
def test_agg_datetimes_mixed():
data = [[1, "2012-01-01", 1.0], [2, "2012-01-02", 2.0], [3, None, 3.0]]
df1 = DataFrame(
{
"key": [x[0] for x in data],
"date": [x[1] for x in data],
"value": [x[2] for x in data],
}
)
data = [
[
row[0],
(dt.datetime.strptime(row[1], "%Y-%m-%d").date() if row[1] else None),
row[2],
]
for row in data
]
df2 = DataFrame(
{
"key": [x[0] for x in data],
"date": [x[1] for x in data],
"value": [x[2] for x in data],
}
)
df1["weights"] = df1["value"] / df1["value"].sum()
gb1 = df1.groupby("date").aggregate(np.sum)
df2["weights"] = df1["value"] / df1["value"].sum()
gb2 = df2.groupby("date").aggregate(np.sum)
assert len(gb1) == len(gb2)
def test_agg_period_index():
prng = period_range("2012-1-1", freq="M", periods=3)
df = DataFrame(np.random.randn(3, 2), index=prng)
rs = df.groupby(level=0).sum()
assert isinstance(rs.index, PeriodIndex)
# GH 3579
index = period_range(start="1999-01", periods=5, freq="M")
s1 = Series(np.random.rand(len(index)), index=index)
s2 = Series(np.random.rand(len(index)), index=index)
df = DataFrame.from_dict({"s1": s1, "s2": s2})
grouped = df.groupby(df.index.month)
list(grouped)
def test_agg_dict_parameter_cast_result_dtypes():
# GH 12821
df = DataFrame(
{
"class": ["A", "A", "B", "B", "C", "C", "D", "D"],
"time": date_range("1/1/2011", periods=8, freq="H"),
}
)
df.loc[[0, 1, 2, 5], "time"] = None
# test for `first` function
exp = df.loc[[0, 3, 4, 6]].set_index("class")
grouped = df.groupby("class")
tm.assert_frame_equal(grouped.first(), exp)
tm.assert_frame_equal(grouped.agg("first"), exp)
tm.assert_frame_equal(grouped.agg({"time": "first"}), exp)
tm.assert_series_equal(grouped.time.first(), exp["time"])
tm.assert_series_equal(grouped.time.agg("first"), exp["time"])
# test for `last` function
exp = df.loc[[0, 3, 4, 7]].set_index("class")
grouped = df.groupby("class")
tm.assert_frame_equal(grouped.last(), exp)
tm.assert_frame_equal(grouped.agg("last"), exp)
tm.assert_frame_equal(grouped.agg({"time": "last"}), exp)
tm.assert_series_equal(grouped.time.last(), exp["time"])
tm.assert_series_equal(grouped.time.agg("last"), exp["time"])
# count
exp = Series([2, 2, 2, 2], index=Index(list("ABCD"), name="class"), name="time")
tm.assert_series_equal(grouped.time.agg(len), exp)
tm.assert_series_equal(grouped.time.size(), exp)
exp = Series([0, 1, 1, 2], index=Index(list("ABCD"), name="class"), name="time")
tm.assert_series_equal(grouped.time.count(), exp)
def test_agg_cast_results_dtypes():
# similar to GH12821
# xref #11444
u = [dt.datetime(2015, x + 1, 1) for x in range(12)]
v = list("aaabbbbbbccd")
df = DataFrame({"X": v, "Y": u})
result = df.groupby("X")["Y"].agg(len)
expected = df.groupby("X")["Y"].count()
tm.assert_series_equal(result, expected)
def test_aggregate_float64_no_int64():
# see gh-11199
df = DataFrame({"a": [1, 2, 3, 4, 5], "b": [1, 2, 2, 4, 5], "c": [1, 2, 3, 4, 5]})
expected = DataFrame({"a": [1, 2.5, 4, 5]}, index=[1, 2, 4, 5])
expected.index.name = "b"
result = df.groupby("b")[["a"]].mean()
tm.assert_frame_equal(result, expected)
expected = DataFrame({"a": [1, 2.5, 4, 5], "c": [1, 2.5, 4, 5]}, index=[1, 2, 4, 5])
expected.index.name = "b"
result = df.groupby("b")[["a", "c"]].mean()
tm.assert_frame_equal(result, expected)
def test_aggregate_api_consistency():
# GH 9052
# make sure that the aggregates via dict
# are consistent
df = DataFrame(
{
"A": ["foo", "bar", "foo", "bar", "foo", "bar", "foo", "foo"],
"B": ["one", "one", "two", "two", "two", "two", "one", "two"],
"C": np.random.randn(8) + 1.0,
"D": np.arange(8),
}
)
grouped = df.groupby(["A", "B"])
c_mean = grouped["C"].mean()
c_sum = grouped["C"].sum()
d_mean = grouped["D"].mean()
d_sum = grouped["D"].sum()
result = grouped["D"].agg(["sum", "mean"])
expected = pd.concat([d_sum, d_mean], axis=1)
expected.columns = ["sum", "mean"]
tm.assert_frame_equal(result, expected, check_like=True)
result = grouped.agg([np.sum, np.mean])
expected = pd.concat([c_sum, c_mean, d_sum, d_mean], axis=1)
expected.columns = MultiIndex.from_product([["C", "D"], ["sum", "mean"]])
tm.assert_frame_equal(result, expected, check_like=True)
result = grouped[["D", "C"]].agg([np.sum, np.mean])
expected = pd.concat([d_sum, d_mean, c_sum, c_mean], axis=1)
expected.columns = MultiIndex.from_product([["D", "C"], ["sum", "mean"]])
tm.assert_frame_equal(result, expected, check_like=True)
result = grouped.agg({"C": "mean", "D": "sum"})
expected = pd.concat([d_sum, c_mean], axis=1)
tm.assert_frame_equal(result, expected, check_like=True)
result = grouped.agg({"C": ["mean", "sum"], "D": ["mean", "sum"]})
expected = pd.concat([c_mean, c_sum, d_mean, d_sum], axis=1)
expected.columns = MultiIndex.from_product([["C", "D"], ["mean", "sum"]])
msg = r"Column\(s\) \['r', 'r2'\] do not exist"
with pytest.raises(SpecificationError, match=msg):
grouped[["D", "C"]].agg({"r": np.sum, "r2": np.mean})
def test_agg_dict_renaming_deprecation():
# 15931
df = DataFrame({"A": [1, 1, 1, 2, 2], "B": range(5), "C": range(5)})
msg = r"nested renamer is not supported"
with pytest.raises(SpecificationError, match=msg):
df.groupby("A").agg(
{"B": {"foo": ["sum", "max"]}, "C": {"bar": ["count", "min"]}}
)
msg = r"Column\(s\) \['ma'\] do not exist"
with pytest.raises(SpecificationError, match=msg):
df.groupby("A")[["B", "C"]].agg({"ma": "max"})
msg = r"nested renamer is not supported"
with pytest.raises(SpecificationError, match=msg):
df.groupby("A").B.agg({"foo": "count"})
def test_agg_compat():
# GH 12334
df = DataFrame(
{
"A": ["foo", "bar", "foo", "bar", "foo", "bar", "foo", "foo"],
"B": ["one", "one", "two", "two", "two", "two", "one", "two"],
"C": np.random.randn(8) + 1.0,
"D": np.arange(8),
}
)
g = df.groupby(["A", "B"])
msg = r"nested renamer is not supported"
with pytest.raises(SpecificationError, match=msg):
g["D"].agg({"C": ["sum", "std"]})
with pytest.raises(SpecificationError, match=msg):
g["D"].agg({"C": "sum", "D": "std"})
def test_agg_nested_dicts():
# API change for disallowing these types of nested dicts
df = DataFrame(
{
"A": ["foo", "bar", "foo", "bar", "foo", "bar", "foo", "foo"],
"B": ["one", "one", "two", "two", "two", "two", "one", "two"],
"C": np.random.randn(8) + 1.0,
"D": np.arange(8),
}
)
g = df.groupby(["A", "B"])
msg = r"nested renamer is not supported"
with pytest.raises(SpecificationError, match=msg):
g.aggregate({"r1": {"C": ["mean", "sum"]}, "r2": {"D": ["mean", "sum"]}})
with pytest.raises(SpecificationError, match=msg):
g.agg({"C": {"ra": ["mean", "std"]}, "D": {"rb": ["mean", "std"]}})
# same name as the original column
# GH9052
with pytest.raises(SpecificationError, match=msg):
g["D"].agg({"result1": np.sum, "result2": np.mean})
with pytest.raises(SpecificationError, match=msg):
g["D"].agg({"D": np.sum, "result2": np.mean})
def test_agg_item_by_item_raise_typeerror():
df = DataFrame(np.random.randint(10, size=(20, 10)))
def raiseException(df):
pprint_thing("----------------------------------------")
pprint_thing(df.to_string())
raise TypeError("test")
with pytest.raises(TypeError, match="test"):
df.groupby(0).agg(raiseException)
def test_series_agg_multikey():
ts = tm.makeTimeSeries()
grouped = ts.groupby([lambda x: x.year, lambda x: x.month])
result = grouped.agg(np.sum)
expected = grouped.sum()
tm.assert_series_equal(result, expected)
def test_series_agg_multi_pure_python():
data = DataFrame(
{
"A": [
"foo",
"foo",
"foo",
"foo",
"bar",
"bar",
"bar",
"bar",
"foo",
"foo",
"foo",
],
"B": [
"one",
"one",
"one",
"two",
"one",
"one",
"one",
"two",
"two",
"two",
"one",
],
"C": [
"dull",
"dull",
"shiny",
"dull",
"dull",
"shiny",
"shiny",
"dull",
"shiny",
"shiny",
"shiny",
],
"D": np.random.randn(11),
"E": np.random.randn(11),
"F": np.random.randn(11),
}
)
def bad(x):
assert len(x.values.base) > 0
return "foo"
result = data.groupby(["A", "B"]).agg(bad)
expected = data.groupby(["A", "B"]).agg(lambda x: "foo")
tm.assert_frame_equal(result, expected)
def test_agg_consistency():
# agg with ([]) and () not consistent
# GH 6715
def P1(a):
return np.percentile(a.dropna(), q=1)
df = DataFrame(
{
"col1": [1, 2, 3, 4],
"col2": [10, 25, 26, 31],
"date": [
dt.date(2013, 2, 10),
dt.date(2013, 2, 10),
dt.date(2013, 2, 11),
dt.date(2013, 2, 11),
],
}
)
g = df.groupby("date")
expected = g.agg([P1])
expected.columns = expected.columns.levels[0]
result = g.agg(P1)
tm.assert_frame_equal(result, expected)
def test_agg_callables():
# GH 7929
df = DataFrame({"foo": [1, 2], "bar": [3, 4]}).astype(np.int64)
class fn_class:
def __call__(self, x):
return sum(x)
equiv_callables = [
sum,
np.sum,
lambda x: sum(x),
lambda x: x.sum(),
partial(sum),
fn_class(),
]
expected = df.groupby("foo").agg(sum)
for ecall in equiv_callables:
result = df.groupby("foo").agg(ecall)
tm.assert_frame_equal(result, expected)
def test_agg_over_numpy_arrays():
# GH 3788
df = DataFrame(
[
[1, np.array([10, 20, 30])],
[1, np.array([40, 50, 60])],
[2, np.array([20, 30, 40])],
],
columns=["category", "arraydata"],
)
result = df.groupby("category").agg(sum)
expected_data = [[np.array([50, 70, 90])], [np.array([20, 30, 40])]]
expected_index = Index([1, 2], name="category")
expected_column = ["arraydata"]
expected = DataFrame(expected_data, index=expected_index, columns=expected_column)
tm.assert_frame_equal(result, expected)
def test_agg_tzaware_non_datetime_result():
# discussed in GH#29589, fixed in GH#29641, operating on tzaware values
# with function that is not dtype-preserving
dti = pd.date_range("2012-01-01", periods=4, tz="UTC")
df = DataFrame({"a": [0, 0, 1, 1], "b": dti})
gb = df.groupby("a")
# Case that _does_ preserve the dtype
result = gb["b"].agg(lambda x: x.iloc[0])
expected = Series(dti[::2], name="b")
expected.index.name = "a"
tm.assert_series_equal(result, expected)
# Cases that do _not_ preserve the dtype
result = gb["b"].agg(lambda x: x.iloc[0].year)
expected = Series([2012, 2012], name="b")
expected.index.name = "a"
tm.assert_series_equal(result, expected)
result = gb["b"].agg(lambda x: x.iloc[-1] - x.iloc[0])
expected = Series([pd.Timedelta(days=1), pd.Timedelta(days=1)], name="b")
expected.index.name = "a"
tm.assert_series_equal(result, expected)
def test_agg_timezone_round_trip():
# GH 15426
ts = pd.Timestamp("2016-01-01 12:00:00", tz="US/Pacific")
df = DataFrame({"a": 1, "b": [ts + dt.timedelta(minutes=nn) for nn in range(10)]})
result1 = df.groupby("a")["b"].agg(np.min).iloc[0]
result2 = df.groupby("a")["b"].agg(lambda x: np.min(x)).iloc[0]
result3 = df.groupby("a")["b"].min().iloc[0]
assert result1 == ts
assert result2 == ts
assert result3 == ts
dates = [
pd.Timestamp(f"2016-01-0{i:d} 12:00:00", tz="US/Pacific") for i in range(1, 5)
]
df = DataFrame({"A": ["a", "b"] * 2, "B": dates})
grouped = df.groupby("A")
ts = df["B"].iloc[0]
assert ts == grouped.nth(0)["B"].iloc[0]
assert ts == grouped.head(1)["B"].iloc[0]
assert ts == grouped.first()["B"].iloc[0]
# GH#27110 applying iloc should return a DataFrame
assert ts == grouped.apply(lambda x: x.iloc[0]).iloc[0, 1]
ts = df["B"].iloc[2]
assert ts == grouped.last()["B"].iloc[0]
# GH#27110 applying iloc should return a DataFrame
assert ts == grouped.apply(lambda x: x.iloc[-1]).iloc[0, 1]
def test_sum_uint64_overflow():
# see gh-14758
# Convert to uint64 and don't overflow
df = DataFrame([[1, 2], [3, 4], [5, 6]], dtype=object)
df = df + 9223372036854775807
index = Index(
[9223372036854775808, 9223372036854775810, 9223372036854775812], dtype=np.uint64
)
expected = DataFrame(
{1: [9223372036854775809, 9223372036854775811, 9223372036854775813]},
index=index,
)
expected.index.name = 0
result = df.groupby(0).sum()
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize(
"structure, expected",
[
(tuple, DataFrame({"C": {(1, 1): (1, 1, 1), (3, 4): (3, 4, 4)}})),
(list, DataFrame({"C": {(1, 1): [1, 1, 1], (3, 4): [3, 4, 4]}})),
(
lambda x: tuple(x),
DataFrame({"C": {(1, 1): (1, 1, 1), (3, 4): (3, 4, 4)}}),
),
(
lambda x: list(x),
DataFrame({"C": {(1, 1): [1, 1, 1], (3, 4): [3, 4, 4]}}),
),
],
)
def test_agg_structs_dataframe(structure, expected):
df = DataFrame(
{"A": [1, 1, 1, 3, 3, 3], "B": [1, 1, 1, 4, 4, 4], "C": [1, 1, 1, 3, 4, 4]}
)
result = df.groupby(["A", "B"]).aggregate(structure)
expected.index.names = ["A", "B"]
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize(
"structure, expected",
[
(tuple, Series([(1, 1, 1), (3, 4, 4)], index=[1, 3], name="C")),
(list, Series([[1, 1, 1], [3, 4, 4]], index=[1, 3], name="C")),
(lambda x: tuple(x), Series([(1, 1, 1), (3, 4, 4)], index=[1, 3], name="C")),
(lambda x: list(x), Series([[1, 1, 1], [3, 4, 4]], index=[1, 3], name="C")),
],
)
def test_agg_structs_series(structure, expected):
# Issue #18079
df = DataFrame(
{"A": [1, 1, 1, 3, 3, 3], "B": [1, 1, 1, 4, 4, 4], "C": [1, 1, 1, 3, 4, 4]}
)
result = df.groupby("A")["C"].aggregate(structure)
expected.index.name = "A"
tm.assert_series_equal(result, expected)
def test_agg_category_nansum(observed):
categories = ["a", "b", "c"]
df = DataFrame(
{"A": pd.Categorical(["a", "a", "b"], categories=categories), "B": [1, 2, 3]}
)
result = df.groupby("A", observed=observed).B.agg(np.nansum)
expected = Series(
[3, 3, 0],
index=pd.CategoricalIndex(["a", "b", "c"], categories=categories, name="A"),
name="B",
)
if observed:
expected = expected[expected != 0]
tm.assert_series_equal(result, expected)
def test_agg_list_like_func():
# GH 18473
df = DataFrame({"A": [str(x) for x in range(3)], "B": [str(x) for x in range(3)]})
grouped = df.groupby("A", as_index=False, sort=False)
result = grouped.agg({"B": lambda x: list(x)})
expected = DataFrame(
{"A": [str(x) for x in range(3)], "B": [[str(x)] for x in range(3)]}
)
tm.assert_frame_equal(result, expected)
def test_agg_lambda_with_timezone():
# GH 23683
df = DataFrame(
{
"tag": [1, 1],
"date": [
pd.Timestamp("2018-01-01", tz="UTC"),
pd.Timestamp("2018-01-02", tz="UTC"),
],
}
)
result = df.groupby("tag").agg({"date": lambda e: e.head(1)})
expected = DataFrame(
[pd.Timestamp("2018-01-01", tz="UTC")],
index=Index([1], name="tag"),
columns=["date"],
)
tm.assert_frame_equal(result, expected)
@pytest.mark.parametrize(
"err_cls",
[
NotImplementedError,
RuntimeError,
KeyError,
IndexError,
OSError,
ValueError,
ArithmeticError,
AttributeError,
],
)
def test_groupby_agg_err_catching(err_cls):
# make sure we suppress anything other than TypeError or AssertionError
# in _python_agg_general
# Use a non-standard EA to make sure we don't go down ndarray paths
from pandas.tests.extension.decimal.array import DecimalArray, make_data, to_decimal
data = make_data()[:5]
df = DataFrame(
{"id1": [0, 0, 0, 1, 1], "id2": [0, 1, 0, 1, 1], "decimals": DecimalArray(data)}
)
expected = Series(to_decimal([data[0], data[3]]))
def weird_func(x):
# weird function that raise something other than TypeError or IndexError
# in _python_agg_general
if len(x) == 0:
raise err_cls
return x.iloc[0]
result = df["decimals"].groupby(df["id1"]).agg(weird_func)
tm.assert_series_equal(result, expected, check_names=False)