import bz2 from collections import Counter from contextlib import contextmanager from datetime import datetime from functools import wraps import gzip import operator import os from pathlib import Path import random import re from shutil import rmtree import string import tempfile from typing import IO, Any, Callable, ContextManager, List, Optional, Type, Union, cast import warnings import zipfile import numpy as np from numpy.random import rand, randn from pandas._config.localization import ( # noqa:F401 can_set_locale, get_locales, set_locale, ) from pandas._libs.lib import no_default import pandas._libs.testing as _testing from pandas._typing import Dtype, FilePathOrBuffer, FrameOrSeries from pandas.compat import get_lzma_file, import_lzma from pandas.core.dtypes.common import ( is_bool, is_categorical_dtype, is_datetime64_dtype, is_datetime64tz_dtype, is_extension_array_dtype, is_interval_dtype, is_number, is_numeric_dtype, is_period_dtype, is_sequence, is_timedelta64_dtype, needs_i8_conversion, ) from pandas.core.dtypes.missing import array_equivalent import pandas as pd from pandas import ( Categorical, CategoricalIndex, DataFrame, DatetimeIndex, Index, IntervalIndex, MultiIndex, RangeIndex, Series, bdate_range, ) from pandas.core.algorithms import safe_sort, take_1d from pandas.core.arrays import ( DatetimeArray, ExtensionArray, IntervalArray, PeriodArray, TimedeltaArray, period_array, ) from pandas.core.arrays.datetimelike import DatetimeLikeArrayMixin from pandas.io.common import urlopen from pandas.io.formats.printing import pprint_thing lzma = import_lzma() _N = 30 _K = 4 _RAISE_NETWORK_ERROR_DEFAULT = False UNSIGNED_INT_DTYPES: List[Dtype] = ["uint8", "uint16", "uint32", "uint64"] UNSIGNED_EA_INT_DTYPES: List[Dtype] = ["UInt8", "UInt16", "UInt32", "UInt64"] SIGNED_INT_DTYPES: List[Dtype] = [int, "int8", "int16", "int32", "int64"] SIGNED_EA_INT_DTYPES: List[Dtype] = ["Int8", "Int16", "Int32", "Int64"] ALL_INT_DTYPES = UNSIGNED_INT_DTYPES + SIGNED_INT_DTYPES ALL_EA_INT_DTYPES = UNSIGNED_EA_INT_DTYPES + SIGNED_EA_INT_DTYPES FLOAT_DTYPES: List[Dtype] = [float, "float32", "float64"] FLOAT_EA_DTYPES: List[Dtype] = ["Float32", "Float64"] COMPLEX_DTYPES: List[Dtype] = [complex, "complex64", "complex128"] STRING_DTYPES: List[Dtype] = [str, "str", "U"] DATETIME64_DTYPES: List[Dtype] = ["datetime64[ns]", "M8[ns]"] TIMEDELTA64_DTYPES: List[Dtype] = ["timedelta64[ns]", "m8[ns]"] BOOL_DTYPES = [bool, "bool"] BYTES_DTYPES = [bytes, "bytes"] OBJECT_DTYPES = [object, "object"] ALL_REAL_DTYPES = FLOAT_DTYPES + ALL_INT_DTYPES ALL_NUMPY_DTYPES = ( ALL_REAL_DTYPES + COMPLEX_DTYPES + STRING_DTYPES + DATETIME64_DTYPES + TIMEDELTA64_DTYPES + BOOL_DTYPES + OBJECT_DTYPES + BYTES_DTYPES ) NULL_OBJECTS = [None, np.nan, pd.NaT, float("nan"), pd.NA] # set testing_mode _testing_mode_warnings = (DeprecationWarning, ResourceWarning) def set_testing_mode(): # set the testing mode filters testing_mode = os.environ.get("PANDAS_TESTING_MODE", "None") if "deprecate" in testing_mode: # pandas\_testing.py:119: error: Argument 2 to "simplefilter" has # incompatible type "Tuple[Type[DeprecationWarning], # Type[ResourceWarning]]"; expected "Type[Warning]" warnings.simplefilter( "always", _testing_mode_warnings # type: ignore[arg-type] ) def reset_testing_mode(): # reset the testing mode filters testing_mode = os.environ.get("PANDAS_TESTING_MODE", "None") if "deprecate" in testing_mode: # pandas\_testing.py:126: error: Argument 2 to "simplefilter" has # incompatible type "Tuple[Type[DeprecationWarning], # Type[ResourceWarning]]"; expected "Type[Warning]" warnings.simplefilter( "ignore", _testing_mode_warnings # type: ignore[arg-type] ) set_testing_mode() def reset_display_options(): """ Reset the display options for printing and representing objects. """ pd.reset_option("^display.", silent=True) def round_trip_pickle( obj: Any, path: Optional[FilePathOrBuffer] = None ) -> FrameOrSeries: """ Pickle an object and then read it again. Parameters ---------- obj : any object The object to pickle and then re-read. path : str, path object or file-like object, default None The path where the pickled object is written and then read. Returns ------- pandas object The original object that was pickled and then re-read. """ _path = path if _path is None: _path = f"__{rands(10)}__.pickle" with ensure_clean(_path) as temp_path: pd.to_pickle(obj, temp_path) return pd.read_pickle(temp_path) def round_trip_pathlib(writer, reader, path: Optional[str] = None): """ Write an object to file specified by a pathlib.Path and read it back Parameters ---------- writer : callable bound to pandas object IO writing function (e.g. DataFrame.to_csv ) reader : callable IO reading function (e.g. pd.read_csv ) path : str, default None The path where the object is written and then read. Returns ------- pandas object The original object that was serialized and then re-read. """ import pytest Path = pytest.importorskip("pathlib").Path if path is None: path = "___pathlib___" with ensure_clean(path) as path: writer(Path(path)) obj = reader(Path(path)) return obj def round_trip_localpath(writer, reader, path: Optional[str] = None): """ Write an object to file specified by a py.path LocalPath and read it back. Parameters ---------- writer : callable bound to pandas object IO writing function (e.g. DataFrame.to_csv ) reader : callable IO reading function (e.g. pd.read_csv ) path : str, default None The path where the object is written and then read. Returns ------- pandas object The original object that was serialized and then re-read. """ import pytest LocalPath = pytest.importorskip("py.path").local if path is None: path = "___localpath___" with ensure_clean(path) as path: writer(LocalPath(path)) obj = reader(LocalPath(path)) return obj @contextmanager def decompress_file(path, compression): """ Open a compressed file and return a file object. Parameters ---------- path : str The path where the file is read from. compression : {'gzip', 'bz2', 'zip', 'xz', None} Name of the decompression to use Returns ------- file object """ if compression is None: f = open(path, "rb") elif compression == "gzip": # pandas\_testing.py:243: error: Incompatible types in assignment # (expression has type "IO[Any]", variable has type "BinaryIO") f = gzip.open(path, "rb") # type: ignore[assignment] elif compression == "bz2": # pandas\_testing.py:245: error: Incompatible types in assignment # (expression has type "BZ2File", variable has type "BinaryIO") f = bz2.BZ2File(path, "rb") # type: ignore[assignment] elif compression == "xz": f = get_lzma_file(lzma)(path, "rb") elif compression == "zip": zip_file = zipfile.ZipFile(path) zip_names = zip_file.namelist() if len(zip_names) == 1: # pandas\_testing.py:252: error: Incompatible types in assignment # (expression has type "IO[bytes]", variable has type "BinaryIO") f = zip_file.open(zip_names.pop()) # type: ignore[assignment] else: raise ValueError(f"ZIP file {path} error. Only one file per ZIP.") else: raise ValueError(f"Unrecognized compression type: {compression}") try: yield f finally: f.close() if compression == "zip": zip_file.close() def write_to_compressed(compression, path, data, dest="test"): """ Write data to a compressed file. Parameters ---------- compression : {'gzip', 'bz2', 'zip', 'xz'} The compression type to use. path : str The file path to write the data. data : str The data to write. dest : str, default "test" The destination file (for ZIP only) Raises ------ ValueError : An invalid compression value was passed in. """ if compression == "zip": compress_method = zipfile.ZipFile elif compression == "gzip": # pandas\_testing.py:288: error: Incompatible types in assignment # (expression has type "Type[GzipFile]", variable has type # "Type[ZipFile]") compress_method = gzip.GzipFile # type: ignore[assignment] elif compression == "bz2": # pandas\_testing.py:290: error: Incompatible types in assignment # (expression has type "Type[BZ2File]", variable has type # "Type[ZipFile]") compress_method = bz2.BZ2File # type: ignore[assignment] elif compression == "xz": compress_method = get_lzma_file(lzma) else: raise ValueError(f"Unrecognized compression type: {compression}") if compression == "zip": mode = "w" args = (dest, data) method = "writestr" else: mode = "wb" # pandas\_testing.py:302: error: Incompatible types in assignment # (expression has type "Tuple[Any]", variable has type "Tuple[Any, # Any]") args = (data,) # type: ignore[assignment] method = "write" with compress_method(path, mode=mode) as f: getattr(f, method)(*args) def _get_tol_from_less_precise(check_less_precise: Union[bool, int]) -> float: """ Return the tolerance equivalent to the deprecated `check_less_precise` parameter. Parameters ---------- check_less_precise : bool or int Returns ------- float Tolerance to be used as relative/absolute tolerance. Examples -------- >>> # Using check_less_precise as a bool: >>> _get_tol_from_less_precise(False) 0.5e-5 >>> _get_tol_from_less_precise(True) 0.5e-3 >>> # Using check_less_precise as an int representing the decimal >>> # tolerance intended: >>> _get_tol_from_less_precise(2) 0.5e-2 >>> _get_tol_from_less_precise(8) 0.5e-8 """ if isinstance(check_less_precise, bool): if check_less_precise: # 3-digit tolerance return 0.5e-3 else: # 5-digit tolerance return 0.5e-5 else: # Equivalent to setting checking_less_precise= return 0.5 * 10 ** -check_less_precise def assert_almost_equal( left, right, check_dtype: Union[bool, str] = "equiv", check_less_precise: Union[bool, int] = no_default, rtol: float = 1.0e-5, atol: float = 1.0e-8, **kwargs, ): """ Check that the left and right objects are approximately equal. By approximately equal, we refer to objects that are numbers or that contain numbers which may be equivalent to specific levels of precision. Parameters ---------- left : object right : object check_dtype : bool or {'equiv'}, default 'equiv' Check dtype if both a and b are the same type. If 'equiv' is passed in, then `RangeIndex` and `Int64Index` are also considered equivalent when doing type checking. check_less_precise : bool or int, default False Specify comparison precision. 5 digits (False) or 3 digits (True) after decimal points are compared. If int, then specify the number of digits to compare. When comparing two numbers, if the first number has magnitude less than 1e-5, we compare the two numbers directly and check whether they are equivalent within the specified precision. Otherwise, we compare the **ratio** of the second number to the first number and check whether it is equivalent to 1 within the specified precision. .. deprecated:: 1.1.0 Use `rtol` and `atol` instead to define relative/absolute tolerance, respectively. Similar to :func:`math.isclose`. rtol : float, default 1e-5 Relative tolerance. .. versionadded:: 1.1.0 atol : float, default 1e-8 Absolute tolerance. .. versionadded:: 1.1.0 """ if check_less_precise is not no_default: warnings.warn( "The 'check_less_precise' keyword in testing.assert_*_equal " "is deprecated and will be removed in a future version. " "You can stop passing 'check_less_precise' to silence this warning.", FutureWarning, stacklevel=2, ) rtol = atol = _get_tol_from_less_precise(check_less_precise) if isinstance(left, pd.Index): assert_index_equal( left, right, check_exact=False, exact=check_dtype, rtol=rtol, atol=atol, **kwargs, ) elif isinstance(left, pd.Series): assert_series_equal( left, right, check_exact=False, check_dtype=check_dtype, rtol=rtol, atol=atol, **kwargs, ) elif isinstance(left, pd.DataFrame): assert_frame_equal( left, right, check_exact=False, check_dtype=check_dtype, rtol=rtol, atol=atol, **kwargs, ) else: # Other sequences. if check_dtype: if is_number(left) and is_number(right): # Do not compare numeric classes, like np.float64 and float. pass elif is_bool(left) and is_bool(right): # Do not compare bool classes, like np.bool_ and bool. pass else: if isinstance(left, np.ndarray) or isinstance(right, np.ndarray): obj = "numpy array" else: obj = "Input" assert_class_equal(left, right, obj=obj) _testing.assert_almost_equal( left, right, check_dtype=check_dtype, rtol=rtol, atol=atol, **kwargs ) def _check_isinstance(left, right, cls): """ Helper method for our assert_* methods that ensures that the two objects being compared have the right type before proceeding with the comparison. Parameters ---------- left : The first object being compared. right : The second object being compared. cls : The class type to check against. Raises ------ AssertionError : Either `left` or `right` is not an instance of `cls`. """ cls_name = cls.__name__ if not isinstance(left, cls): raise AssertionError( f"{cls_name} Expected type {cls}, found {type(left)} instead" ) if not isinstance(right, cls): raise AssertionError( f"{cls_name} Expected type {cls}, found {type(right)} instead" ) def assert_dict_equal(left, right, compare_keys: bool = True): _check_isinstance(left, right, dict) _testing.assert_dict_equal(left, right, compare_keys=compare_keys) def randbool(size=(), p: float = 0.5): return rand(*size) <= p RANDS_CHARS = np.array(list(string.ascii_letters + string.digits), dtype=(np.str_, 1)) RANDU_CHARS = np.array( list("".join(map(chr, range(1488, 1488 + 26))) + string.digits), dtype=(np.unicode_, 1), ) def rands_array(nchars, size, dtype="O"): """ Generate an array of byte strings. """ retval = ( np.random.choice(RANDS_CHARS, size=nchars * np.prod(size)) .view((np.str_, nchars)) .reshape(size) ) return retval.astype(dtype) def randu_array(nchars, size, dtype="O"): """ Generate an array of unicode strings. """ retval = ( np.random.choice(RANDU_CHARS, size=nchars * np.prod(size)) .view((np.unicode_, nchars)) .reshape(size) ) return retval.astype(dtype) def rands(nchars): """ Generate one random byte string. See `rands_array` if you want to create an array of random strings. """ return "".join(np.random.choice(RANDS_CHARS, nchars)) def close(fignum=None): from matplotlib.pyplot import close as _close, get_fignums if fignum is None: for fignum in get_fignums(): _close(fignum) else: _close(fignum) # ----------------------------------------------------------------------------- # contextmanager to ensure the file cleanup @contextmanager def ensure_clean(filename=None, return_filelike: bool = False, **kwargs: Any): """ Gets a temporary path and agrees to remove on close. This implementation does not use tempfile.mkstemp to avoid having a file handle. If the code using the returned path wants to delete the file itself, windows requires that no program has a file handle to it. Parameters ---------- filename : str (optional) suffix of the created file. return_filelike : bool (default False) if True, returns a file-like which is *always* cleaned. Necessary for savefig and other functions which want to append extensions. **kwargs Additional keywords are passed to open(). """ folder = Path(tempfile.gettempdir()) if filename is None: filename = "" filename = ( "".join(random.choices(string.ascii_letters + string.digits, k=30)) + filename ) path = folder / filename path.touch() handle_or_str: Union[str, IO] = str(path) if return_filelike: kwargs.setdefault("mode", "w+b") handle_or_str = open(path, **kwargs) try: yield handle_or_str finally: if not isinstance(handle_or_str, str): handle_or_str.close() if path.is_file(): path.unlink() @contextmanager def ensure_clean_dir(): """ Get a temporary directory path and agrees to remove on close. Yields ------ Temporary directory path """ directory_name = tempfile.mkdtemp(suffix="") try: yield directory_name finally: try: rmtree(directory_name) except OSError: pass @contextmanager def ensure_safe_environment_variables(): """ Get a context manager to safely set environment variables All changes will be undone on close, hence environment variables set within this contextmanager will neither persist nor change global state. """ saved_environ = dict(os.environ) try: yield finally: os.environ.clear() os.environ.update(saved_environ) # ----------------------------------------------------------------------------- # Comparators def equalContents(arr1, arr2) -> bool: """ Checks if the set of unique elements of arr1 and arr2 are equivalent. """ return frozenset(arr1) == frozenset(arr2) def assert_index_equal( left: Index, right: Index, exact: Union[bool, str] = "equiv", check_names: bool = True, check_less_precise: Union[bool, int] = no_default, check_exact: bool = True, check_categorical: bool = True, check_order: bool = True, rtol: float = 1.0e-5, atol: float = 1.0e-8, obj: str = "Index", ) -> None: """ Check that left and right Index are equal. Parameters ---------- left : Index right : Index exact : bool or {'equiv'}, default 'equiv' Whether to check the Index class, dtype and inferred_type are identical. If 'equiv', then RangeIndex can be substituted for Int64Index as well. check_names : bool, default True Whether to check the names attribute. check_less_precise : bool or int, default False Specify comparison precision. Only used when check_exact is False. 5 digits (False) or 3 digits (True) after decimal points are compared. If int, then specify the digits to compare. .. deprecated:: 1.1.0 Use `rtol` and `atol` instead to define relative/absolute tolerance, respectively. Similar to :func:`math.isclose`. check_exact : bool, default True Whether to compare number exactly. check_categorical : bool, default True Whether to compare internal Categorical exactly. check_order : bool, default True Whether to compare the order of index entries as well as their values. If True, both indexes must contain the same elements, in the same order. If False, both indexes must contain the same elements, but in any order. .. versionadded:: 1.2.0 rtol : float, default 1e-5 Relative tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 atol : float, default 1e-8 Absolute tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 obj : str, default 'Index' Specify object name being compared, internally used to show appropriate assertion message. Examples -------- >>> from pandas.testing import assert_index_equal >>> a = pd.Index([1, 2, 3]) >>> b = pd.Index([1, 2, 3]) >>> assert_index_equal(a, b) """ __tracebackhide__ = True def _check_types(left, right, obj="Index"): if exact: assert_class_equal(left, right, exact=exact, obj=obj) # Skip exact dtype checking when `check_categorical` is False if check_categorical: assert_attr_equal("dtype", left, right, obj=obj) # allow string-like to have different inferred_types if left.inferred_type in ("string"): assert right.inferred_type in ("string") else: assert_attr_equal("inferred_type", left, right, obj=obj) def _get_ilevel_values(index, level): # accept level number only unique = index.levels[level] level_codes = index.codes[level] filled = take_1d(unique._values, level_codes, fill_value=unique._na_value) return unique._shallow_copy(filled, name=index.names[level]) if check_less_precise is not no_default: warnings.warn( "The 'check_less_precise' keyword in testing.assert_*_equal " "is deprecated and will be removed in a future version. " "You can stop passing 'check_less_precise' to silence this warning.", FutureWarning, stacklevel=2, ) rtol = atol = _get_tol_from_less_precise(check_less_precise) # instance validation _check_isinstance(left, right, Index) # class / dtype comparison _check_types(left, right, obj=obj) # level comparison if left.nlevels != right.nlevels: msg1 = f"{obj} levels are different" msg2 = f"{left.nlevels}, {left}" msg3 = f"{right.nlevels}, {right}" raise_assert_detail(obj, msg1, msg2, msg3) # length comparison if len(left) != len(right): msg1 = f"{obj} length are different" msg2 = f"{len(left)}, {left}" msg3 = f"{len(right)}, {right}" raise_assert_detail(obj, msg1, msg2, msg3) # If order doesn't matter then sort the index entries if not check_order: left = Index(safe_sort(left)) right = Index(safe_sort(right)) # MultiIndex special comparison for little-friendly error messages if left.nlevels > 1: left = cast(MultiIndex, left) right = cast(MultiIndex, right) for level in range(left.nlevels): # cannot use get_level_values here because it can change dtype llevel = _get_ilevel_values(left, level) rlevel = _get_ilevel_values(right, level) lobj = f"MultiIndex level [{level}]" assert_index_equal( llevel, rlevel, exact=exact, check_names=check_names, check_exact=check_exact, rtol=rtol, atol=atol, obj=lobj, ) # get_level_values may change dtype _check_types(left.levels[level], right.levels[level], obj=obj) # skip exact index checking when `check_categorical` is False if check_exact and check_categorical: if not left.equals(right): diff = np.sum((left.values != right.values).astype(int)) * 100.0 / len(left) msg = f"{obj} values are different ({np.round(diff, 5)} %)" raise_assert_detail(obj, msg, left, right) else: _testing.assert_almost_equal( left.values, right.values, rtol=rtol, atol=atol, check_dtype=exact, obj=obj, lobj=left, robj=right, ) # metadata comparison if check_names: assert_attr_equal("names", left, right, obj=obj) if isinstance(left, pd.PeriodIndex) or isinstance(right, pd.PeriodIndex): assert_attr_equal("freq", left, right, obj=obj) if isinstance(left, pd.IntervalIndex) or isinstance(right, pd.IntervalIndex): assert_interval_array_equal(left._values, right._values) if check_categorical: if is_categorical_dtype(left.dtype) or is_categorical_dtype(right.dtype): assert_categorical_equal(left._values, right._values, obj=f"{obj} category") def assert_class_equal(left, right, exact: Union[bool, str] = True, obj="Input"): """ Checks classes are equal. """ __tracebackhide__ = True def repr_class(x): if isinstance(x, Index): # return Index as it is to include values in the error message return x return type(x).__name__ if exact == "equiv": if type(left) != type(right): # allow equivalence of Int64Index/RangeIndex types = {type(left).__name__, type(right).__name__} if len(types - {"Int64Index", "RangeIndex"}): msg = f"{obj} classes are not equivalent" raise_assert_detail(obj, msg, repr_class(left), repr_class(right)) elif exact: if type(left) != type(right): msg = f"{obj} classes are different" raise_assert_detail(obj, msg, repr_class(left), repr_class(right)) def assert_attr_equal(attr: str, left, right, obj: str = "Attributes"): """ Check attributes are equal. Both objects must have attribute. Parameters ---------- attr : str Attribute name being compared. left : object right : object obj : str, default 'Attributes' Specify object name being compared, internally used to show appropriate assertion message """ __tracebackhide__ = True left_attr = getattr(left, attr) right_attr = getattr(right, attr) if left_attr is right_attr: return True elif ( is_number(left_attr) and np.isnan(left_attr) and is_number(right_attr) and np.isnan(right_attr) ): # np.nan return True try: result = left_attr == right_attr except TypeError: # datetimetz on rhs may raise TypeError result = False if not isinstance(result, bool): result = result.all() if result: return True else: msg = f'Attribute "{attr}" are different' raise_assert_detail(obj, msg, left_attr, right_attr) def assert_is_valid_plot_return_object(objs): import matplotlib.pyplot as plt if isinstance(objs, (pd.Series, np.ndarray)): for el in objs.ravel(): msg = ( "one of 'objs' is not a matplotlib Axes instance, " f"type encountered {repr(type(el).__name__)}" ) assert isinstance(el, (plt.Axes, dict)), msg else: msg = ( "objs is neither an ndarray of Artist instances nor a single " "ArtistArtist instance, tuple, or dict, 'objs' is a " f"{repr(type(objs).__name__)}" ) assert isinstance(objs, (plt.Artist, tuple, dict)), msg def assert_is_sorted(seq): """Assert that the sequence is sorted.""" if isinstance(seq, (Index, Series)): seq = seq.values # sorting does not change precisions assert_numpy_array_equal(seq, np.sort(np.array(seq))) def assert_categorical_equal( left, right, check_dtype=True, check_category_order=True, obj="Categorical" ): """ Test that Categoricals are equivalent. Parameters ---------- left : Categorical right : Categorical check_dtype : bool, default True Check that integer dtype of the codes are the same check_category_order : bool, default True Whether the order of the categories should be compared, which implies identical integer codes. If False, only the resulting values are compared. The ordered attribute is checked regardless. obj : str, default 'Categorical' Specify object name being compared, internally used to show appropriate assertion message """ _check_isinstance(left, right, Categorical) if check_category_order: assert_index_equal(left.categories, right.categories, obj=f"{obj}.categories") assert_numpy_array_equal( left.codes, right.codes, check_dtype=check_dtype, obj=f"{obj}.codes" ) else: try: lc = left.categories.sort_values() rc = right.categories.sort_values() except TypeError: # e.g. '<' not supported between instances of 'int' and 'str' lc, rc = left.categories, right.categories assert_index_equal(lc, rc, obj=f"{obj}.categories") assert_index_equal( left.categories.take(left.codes), right.categories.take(right.codes), obj=f"{obj}.values", ) assert_attr_equal("ordered", left, right, obj=obj) def assert_interval_array_equal(left, right, exact="equiv", obj="IntervalArray"): """ Test that two IntervalArrays are equivalent. Parameters ---------- left, right : IntervalArray The IntervalArrays to compare. exact : bool or {'equiv'}, default 'equiv' Whether to check the Index class, dtype and inferred_type are identical. If 'equiv', then RangeIndex can be substituted for Int64Index as well. obj : str, default 'IntervalArray' Specify object name being compared, internally used to show appropriate assertion message """ _check_isinstance(left, right, IntervalArray) kwargs = {} if left._left.dtype.kind in ["m", "M"]: # We have a DatetimeArray or TimedeltaArray kwargs["check_freq"] = False assert_equal(left._left, right._left, obj=f"{obj}.left", **kwargs) assert_equal(left._right, right._right, obj=f"{obj}.left", **kwargs) assert_attr_equal("closed", left, right, obj=obj) def assert_period_array_equal(left, right, obj="PeriodArray"): _check_isinstance(left, right, PeriodArray) assert_numpy_array_equal(left._data, right._data, obj=f"{obj}._data") assert_attr_equal("freq", left, right, obj=obj) def assert_datetime_array_equal(left, right, obj="DatetimeArray", check_freq=True): __tracebackhide__ = True _check_isinstance(left, right, DatetimeArray) assert_numpy_array_equal(left._data, right._data, obj=f"{obj}._data") if check_freq: assert_attr_equal("freq", left, right, obj=obj) assert_attr_equal("tz", left, right, obj=obj) def assert_timedelta_array_equal(left, right, obj="TimedeltaArray", check_freq=True): __tracebackhide__ = True _check_isinstance(left, right, TimedeltaArray) assert_numpy_array_equal(left._data, right._data, obj=f"{obj}._data") if check_freq: assert_attr_equal("freq", left, right, obj=obj) def raise_assert_detail(obj, message, left, right, diff=None, index_values=None): __tracebackhide__ = True msg = f"""{obj} are different {message}""" if isinstance(index_values, np.ndarray): msg += f"\n[index]: {pprint_thing(index_values)}" if isinstance(left, np.ndarray): left = pprint_thing(left) elif is_categorical_dtype(left): left = repr(left) if isinstance(right, np.ndarray): right = pprint_thing(right) elif is_categorical_dtype(right): right = repr(right) msg += f""" [left]: {left} [right]: {right}""" if diff is not None: msg += f"\n[diff]: {diff}" raise AssertionError(msg) def assert_numpy_array_equal( left, right, strict_nan=False, check_dtype=True, err_msg=None, check_same=None, obj="numpy array", index_values=None, ): """ Check that 'np.ndarray' is equivalent. Parameters ---------- left, right : numpy.ndarray or iterable The two arrays to be compared. strict_nan : bool, default False If True, consider NaN and None to be different. check_dtype : bool, default True Check dtype if both a and b are np.ndarray. err_msg : str, default None If provided, used as assertion message. check_same : None|'copy'|'same', default None Ensure left and right refer/do not refer to the same memory area. obj : str, default 'numpy array' Specify object name being compared, internally used to show appropriate assertion message. index_values : numpy.ndarray, default None optional index (shared by both left and right), used in output. """ __tracebackhide__ = True # instance validation # Show a detailed error message when classes are different assert_class_equal(left, right, obj=obj) # both classes must be an np.ndarray _check_isinstance(left, right, np.ndarray) def _get_base(obj): return obj.base if getattr(obj, "base", None) is not None else obj left_base = _get_base(left) right_base = _get_base(right) if check_same == "same": if left_base is not right_base: raise AssertionError(f"{repr(left_base)} is not {repr(right_base)}") elif check_same == "copy": if left_base is right_base: raise AssertionError(f"{repr(left_base)} is {repr(right_base)}") def _raise(left, right, err_msg): if err_msg is None: if left.shape != right.shape: raise_assert_detail( obj, f"{obj} shapes are different", left.shape, right.shape ) diff = 0 for left_arr, right_arr in zip(left, right): # count up differences if not array_equivalent(left_arr, right_arr, strict_nan=strict_nan): diff += 1 diff = diff * 100.0 / left.size msg = f"{obj} values are different ({np.round(diff, 5)} %)" raise_assert_detail(obj, msg, left, right, index_values=index_values) raise AssertionError(err_msg) # compare shape and values if not array_equivalent(left, right, strict_nan=strict_nan): _raise(left, right, err_msg) if check_dtype: if isinstance(left, np.ndarray) and isinstance(right, np.ndarray): assert_attr_equal("dtype", left, right, obj=obj) def assert_extension_array_equal( left, right, check_dtype=True, index_values=None, check_less_precise=no_default, check_exact=False, rtol: float = 1.0e-5, atol: float = 1.0e-8, ): """ Check that left and right ExtensionArrays are equal. Parameters ---------- left, right : ExtensionArray The two arrays to compare. check_dtype : bool, default True Whether to check if the ExtensionArray dtypes are identical. index_values : numpy.ndarray, default None Optional index (shared by both left and right), used in output. check_less_precise : bool or int, default False Specify comparison precision. Only used when check_exact is False. 5 digits (False) or 3 digits (True) after decimal points are compared. If int, then specify the digits to compare. .. deprecated:: 1.1.0 Use `rtol` and `atol` instead to define relative/absolute tolerance, respectively. Similar to :func:`math.isclose`. check_exact : bool, default False Whether to compare number exactly. rtol : float, default 1e-5 Relative tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 atol : float, default 1e-8 Absolute tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 Notes ----- Missing values are checked separately from valid values. A mask of missing values is computed for each and checked to match. The remaining all-valid values are cast to object dtype and checked. Examples -------- >>> from pandas.testing import assert_extension_array_equal >>> a = pd.Series([1, 2, 3, 4]) >>> b, c = a.array, a.array >>> assert_extension_array_equal(b, c) """ if check_less_precise is not no_default: warnings.warn( "The 'check_less_precise' keyword in testing.assert_*_equal " "is deprecated and will be removed in a future version. " "You can stop passing 'check_less_precise' to silence this warning.", FutureWarning, stacklevel=2, ) rtol = atol = _get_tol_from_less_precise(check_less_precise) assert isinstance(left, ExtensionArray), "left is not an ExtensionArray" assert isinstance(right, ExtensionArray), "right is not an ExtensionArray" if check_dtype: assert_attr_equal("dtype", left, right, obj="ExtensionArray") if ( isinstance(left, DatetimeLikeArrayMixin) and isinstance(right, DatetimeLikeArrayMixin) and type(right) == type(left) ): # Avoid slow object-dtype comparisons # np.asarray for case where we have a np.MaskedArray assert_numpy_array_equal( np.asarray(left.asi8), np.asarray(right.asi8), index_values=index_values ) return left_na = np.asarray(left.isna()) right_na = np.asarray(right.isna()) assert_numpy_array_equal( left_na, right_na, obj="ExtensionArray NA mask", index_values=index_values ) left_valid = np.asarray(left[~left_na].astype(object)) right_valid = np.asarray(right[~right_na].astype(object)) if check_exact: assert_numpy_array_equal( left_valid, right_valid, obj="ExtensionArray", index_values=index_values ) else: _testing.assert_almost_equal( left_valid, right_valid, check_dtype=check_dtype, rtol=rtol, atol=atol, obj="ExtensionArray", index_values=index_values, ) # This could be refactored to use the NDFrame.equals method def assert_series_equal( left, right, check_dtype=True, check_index_type="equiv", check_series_type=True, check_less_precise=no_default, check_names=True, check_exact=False, check_datetimelike_compat=False, check_categorical=True, check_category_order=True, check_freq=True, check_flags=True, rtol=1.0e-5, atol=1.0e-8, obj="Series", ): """ Check that left and right Series are equal. Parameters ---------- left : Series right : Series check_dtype : bool, default True Whether to check the Series dtype is identical. check_index_type : bool or {'equiv'}, default 'equiv' Whether to check the Index class, dtype and inferred_type are identical. check_series_type : bool, default True Whether to check the Series class is identical. check_less_precise : bool or int, default False Specify comparison precision. Only used when check_exact is False. 5 digits (False) or 3 digits (True) after decimal points are compared. If int, then specify the digits to compare. When comparing two numbers, if the first number has magnitude less than 1e-5, we compare the two numbers directly and check whether they are equivalent within the specified precision. Otherwise, we compare the **ratio** of the second number to the first number and check whether it is equivalent to 1 within the specified precision. .. deprecated:: 1.1.0 Use `rtol` and `atol` instead to define relative/absolute tolerance, respectively. Similar to :func:`math.isclose`. check_names : bool, default True Whether to check the Series and Index names attribute. check_exact : bool, default False Whether to compare number exactly. check_datetimelike_compat : bool, default False Compare datetime-like which is comparable ignoring dtype. check_categorical : bool, default True Whether to compare internal Categorical exactly. check_category_order : bool, default True Whether to compare category order of internal Categoricals. .. versionadded:: 1.0.2 check_freq : bool, default True Whether to check the `freq` attribute on a DatetimeIndex or TimedeltaIndex. .. versionadded:: 1.1.0 check_flags : bool, default True Whether to check the `flags` attribute. .. versionadded:: 1.2.0 rtol : float, default 1e-5 Relative tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 atol : float, default 1e-8 Absolute tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 obj : str, default 'Series' Specify object name being compared, internally used to show appropriate assertion message. Examples -------- >>> from pandas.testing import assert_series_equal >>> a = pd.Series([1, 2, 3, 4]) >>> b = pd.Series([1, 2, 3, 4]) >>> assert_series_equal(a, b) """ __tracebackhide__ = True if check_less_precise is not no_default: warnings.warn( "The 'check_less_precise' keyword in testing.assert_*_equal " "is deprecated and will be removed in a future version. " "You can stop passing 'check_less_precise' to silence this warning.", FutureWarning, stacklevel=2, ) rtol = atol = _get_tol_from_less_precise(check_less_precise) # instance validation _check_isinstance(left, right, Series) if check_series_type: assert_class_equal(left, right, obj=obj) # length comparison if len(left) != len(right): msg1 = f"{len(left)}, {left.index}" msg2 = f"{len(right)}, {right.index}" raise_assert_detail(obj, "Series length are different", msg1, msg2) if check_flags: assert left.flags == right.flags, f"{repr(left.flags)} != {repr(right.flags)}" # index comparison assert_index_equal( left.index, right.index, exact=check_index_type, check_names=check_names, check_exact=check_exact, check_categorical=check_categorical, rtol=rtol, atol=atol, obj=f"{obj}.index", ) if check_freq and isinstance(left.index, (pd.DatetimeIndex, pd.TimedeltaIndex)): lidx = left.index ridx = right.index assert lidx.freq == ridx.freq, (lidx.freq, ridx.freq) if check_dtype: # We want to skip exact dtype checking when `check_categorical` # is False. We'll still raise if only one is a `Categorical`, # regardless of `check_categorical` if ( is_categorical_dtype(left.dtype) and is_categorical_dtype(right.dtype) and not check_categorical ): pass else: assert_attr_equal("dtype", left, right, obj=f"Attributes of {obj}") if check_exact and is_numeric_dtype(left.dtype) and is_numeric_dtype(right.dtype): left_values = left._values right_values = right._values # Only check exact if dtype is numeric if is_extension_array_dtype(left_values) and is_extension_array_dtype( right_values ): assert_extension_array_equal( left_values, right_values, check_dtype=check_dtype, index_values=np.asarray(left.index), ) else: assert_numpy_array_equal( left_values, right_values, check_dtype=check_dtype, obj=str(obj), index_values=np.asarray(left.index), ) elif check_datetimelike_compat and ( needs_i8_conversion(left.dtype) or needs_i8_conversion(right.dtype) ): # we want to check only if we have compat dtypes # e.g. integer and M|m are NOT compat, but we can simply check # the values in that case # datetimelike may have different objects (e.g. datetime.datetime # vs Timestamp) but will compare equal if not Index(left._values).equals(Index(right._values)): msg = ( f"[datetimelike_compat=True] {left._values} " f"is not equal to {right._values}." ) raise AssertionError(msg) elif is_interval_dtype(left.dtype) and is_interval_dtype(right.dtype): assert_interval_array_equal(left.array, right.array) elif is_categorical_dtype(left.dtype) or is_categorical_dtype(right.dtype): _testing.assert_almost_equal( left._values, right._values, rtol=rtol, atol=atol, check_dtype=check_dtype, obj=str(obj), index_values=np.asarray(left.index), ) elif is_extension_array_dtype(left.dtype) and is_extension_array_dtype(right.dtype): assert_extension_array_equal( left._values, right._values, check_dtype=check_dtype, index_values=np.asarray(left.index), ) elif is_extension_array_dtype_and_needs_i8_conversion( left.dtype, right.dtype ) or is_extension_array_dtype_and_needs_i8_conversion(right.dtype, left.dtype): assert_extension_array_equal( left._values, right._values, check_dtype=check_dtype, index_values=np.asarray(left.index), ) elif needs_i8_conversion(left.dtype) and needs_i8_conversion(right.dtype): # DatetimeArray or TimedeltaArray assert_extension_array_equal( left._values, right._values, check_dtype=check_dtype, index_values=np.asarray(left.index), ) else: _testing.assert_almost_equal( left._values, right._values, rtol=rtol, atol=atol, check_dtype=check_dtype, obj=str(obj), index_values=np.asarray(left.index), ) # metadata comparison if check_names: assert_attr_equal("name", left, right, obj=obj) if check_categorical: if is_categorical_dtype(left.dtype) or is_categorical_dtype(right.dtype): assert_categorical_equal( left._values, right._values, obj=f"{obj} category", check_category_order=check_category_order, ) # This could be refactored to use the NDFrame.equals method def assert_frame_equal( left, right, check_dtype=True, check_index_type="equiv", check_column_type="equiv", check_frame_type=True, check_less_precise=no_default, check_names=True, by_blocks=False, check_exact=False, check_datetimelike_compat=False, check_categorical=True, check_like=False, check_freq=True, check_flags=True, rtol=1.0e-5, atol=1.0e-8, obj="DataFrame", ): """ Check that left and right DataFrame are equal. This function is intended to compare two DataFrames and output any differences. Is is mostly intended for use in unit tests. Additional parameters allow varying the strictness of the equality checks performed. Parameters ---------- left : DataFrame First DataFrame to compare. right : DataFrame Second DataFrame to compare. check_dtype : bool, default True Whether to check the DataFrame dtype is identical. check_index_type : bool or {'equiv'}, default 'equiv' Whether to check the Index class, dtype and inferred_type are identical. check_column_type : bool or {'equiv'}, default 'equiv' Whether to check the columns class, dtype and inferred_type are identical. Is passed as the ``exact`` argument of :func:`assert_index_equal`. check_frame_type : bool, default True Whether to check the DataFrame class is identical. check_less_precise : bool or int, default False Specify comparison precision. Only used when check_exact is False. 5 digits (False) or 3 digits (True) after decimal points are compared. If int, then specify the digits to compare. When comparing two numbers, if the first number has magnitude less than 1e-5, we compare the two numbers directly and check whether they are equivalent within the specified precision. Otherwise, we compare the **ratio** of the second number to the first number and check whether it is equivalent to 1 within the specified precision. .. deprecated:: 1.1.0 Use `rtol` and `atol` instead to define relative/absolute tolerance, respectively. Similar to :func:`math.isclose`. check_names : bool, default True Whether to check that the `names` attribute for both the `index` and `column` attributes of the DataFrame is identical. by_blocks : bool, default False Specify how to compare internal data. If False, compare by columns. If True, compare by blocks. check_exact : bool, default False Whether to compare number exactly. check_datetimelike_compat : bool, default False Compare datetime-like which is comparable ignoring dtype. check_categorical : bool, default True Whether to compare internal Categorical exactly. check_like : bool, default False If True, ignore the order of index & columns. Note: index labels must match their respective rows (same as in columns) - same labels must be with the same data. check_freq : bool, default True Whether to check the `freq` attribute on a DatetimeIndex or TimedeltaIndex. .. versionadded:: 1.1.0 check_flags : bool, default True Whether to check the `flags` attribute. rtol : float, default 1e-5 Relative tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 atol : float, default 1e-8 Absolute tolerance. Only used when check_exact is False. .. versionadded:: 1.1.0 obj : str, default 'DataFrame' Specify object name being compared, internally used to show appropriate assertion message. See Also -------- assert_series_equal : Equivalent method for asserting Series equality. DataFrame.equals : Check DataFrame equality. Examples -------- This example shows comparing two DataFrames that are equal but with columns of differing dtypes. >>> from pandas._testing import assert_frame_equal >>> df1 = pd.DataFrame({'a': [1, 2], 'b': [3, 4]}) >>> df2 = pd.DataFrame({'a': [1, 2], 'b': [3.0, 4.0]}) df1 equals itself. >>> assert_frame_equal(df1, df1) df1 differs from df2 as column 'b' is of a different type. >>> assert_frame_equal(df1, df2) Traceback (most recent call last): ... AssertionError: Attributes of DataFrame.iloc[:, 1] (column name="b") are different Attribute "dtype" are different [left]: int64 [right]: float64 Ignore differing dtypes in columns with check_dtype. >>> assert_frame_equal(df1, df2, check_dtype=False) """ __tracebackhide__ = True if check_less_precise is not no_default: warnings.warn( "The 'check_less_precise' keyword in testing.assert_*_equal " "is deprecated and will be removed in a future version. " "You can stop passing 'check_less_precise' to silence this warning.", FutureWarning, stacklevel=2, ) rtol = atol = _get_tol_from_less_precise(check_less_precise) # instance validation _check_isinstance(left, right, DataFrame) if check_frame_type: assert isinstance(left, type(right)) # assert_class_equal(left, right, obj=obj) # shape comparison if left.shape != right.shape: raise_assert_detail( obj, f"{obj} shape mismatch", f"{repr(left.shape)}", f"{repr(right.shape)}" ) if check_flags: assert left.flags == right.flags, f"{repr(left.flags)} != {repr(right.flags)}" # index comparison assert_index_equal( left.index, right.index, exact=check_index_type, check_names=check_names, check_exact=check_exact, check_categorical=check_categorical, check_order=not check_like, rtol=rtol, atol=atol, obj=f"{obj}.index", ) # column comparison assert_index_equal( left.columns, right.columns, exact=check_column_type, check_names=check_names, check_exact=check_exact, check_categorical=check_categorical, check_order=not check_like, rtol=rtol, atol=atol, obj=f"{obj}.columns", ) if check_like: left, right = left.reindex_like(right), right # compare by blocks if by_blocks: rblocks = right._to_dict_of_blocks() lblocks = left._to_dict_of_blocks() for dtype in list(set(list(lblocks.keys()) + list(rblocks.keys()))): assert dtype in lblocks assert dtype in rblocks assert_frame_equal( lblocks[dtype], rblocks[dtype], check_dtype=check_dtype, obj=obj ) # compare by columns else: for i, col in enumerate(left.columns): assert col in right lcol = left.iloc[:, i] rcol = right.iloc[:, i] assert_series_equal( lcol, rcol, check_dtype=check_dtype, check_index_type=check_index_type, check_exact=check_exact, check_names=check_names, check_datetimelike_compat=check_datetimelike_compat, check_categorical=check_categorical, check_freq=check_freq, obj=f'{obj}.iloc[:, {i}] (column name="{col}")', rtol=rtol, atol=atol, ) def assert_equal(left, right, **kwargs): """ Wrapper for tm.assert_*_equal to dispatch to the appropriate test function. Parameters ---------- left, right : Index, Series, DataFrame, ExtensionArray, or np.ndarray The two items to be compared. **kwargs All keyword arguments are passed through to the underlying assert method. """ __tracebackhide__ = True if isinstance(left, pd.Index): assert_index_equal(left, right, **kwargs) if isinstance(left, (pd.DatetimeIndex, pd.TimedeltaIndex)): assert left.freq == right.freq, (left.freq, right.freq) elif isinstance(left, pd.Series): assert_series_equal(left, right, **kwargs) elif isinstance(left, pd.DataFrame): assert_frame_equal(left, right, **kwargs) elif isinstance(left, IntervalArray): assert_interval_array_equal(left, right, **kwargs) elif isinstance(left, PeriodArray): assert_period_array_equal(left, right, **kwargs) elif isinstance(left, DatetimeArray): assert_datetime_array_equal(left, right, **kwargs) elif isinstance(left, TimedeltaArray): assert_timedelta_array_equal(left, right, **kwargs) elif isinstance(left, ExtensionArray): assert_extension_array_equal(left, right, **kwargs) elif isinstance(left, np.ndarray): assert_numpy_array_equal(left, right, **kwargs) elif isinstance(left, str): assert kwargs == {} assert left == right else: raise NotImplementedError(type(left)) def box_expected(expected, box_cls, transpose=True): """ Helper function to wrap the expected output of a test in a given box_class. Parameters ---------- expected : np.ndarray, Index, Series box_cls : {Index, Series, DataFrame} Returns ------- subclass of box_cls """ if box_cls is pd.array: expected = pd.array(expected) elif box_cls is pd.Index: expected = pd.Index(expected) elif box_cls is pd.Series: expected = pd.Series(expected) elif box_cls is pd.DataFrame: expected = pd.Series(expected).to_frame() if transpose: # for vector operations, we need a DataFrame to be a single-row, # not a single-column, in order to operate against non-DataFrame # vectors of the same length. expected = expected.T elif box_cls is PeriodArray: # the PeriodArray constructor is not as flexible as period_array expected = period_array(expected) elif box_cls is DatetimeArray: expected = DatetimeArray(expected) elif box_cls is TimedeltaArray: expected = TimedeltaArray(expected) elif box_cls is np.ndarray: expected = np.array(expected) elif box_cls is to_array: expected = to_array(expected) else: raise NotImplementedError(box_cls) return expected def to_array(obj): # temporary implementation until we get pd.array in place dtype = getattr(obj, "dtype", None) if is_period_dtype(dtype): return period_array(obj) elif is_datetime64_dtype(dtype) or is_datetime64tz_dtype(dtype): return DatetimeArray._from_sequence(obj) elif is_timedelta64_dtype(dtype): return TimedeltaArray._from_sequence(obj) else: return np.array(obj) # ----------------------------------------------------------------------------- # Sparse def assert_sp_array_equal(left, right): """ Check that the left and right SparseArray are equal. Parameters ---------- left : SparseArray right : SparseArray """ _check_isinstance(left, right, pd.arrays.SparseArray) assert_numpy_array_equal(left.sp_values, right.sp_values) # SparseIndex comparison assert isinstance(left.sp_index, pd._libs.sparse.SparseIndex) assert isinstance(right.sp_index, pd._libs.sparse.SparseIndex) left_index = left.sp_index right_index = right.sp_index if not left_index.equals(right_index): raise_assert_detail( "SparseArray.index", "index are not equal", left_index, right_index ) else: # Just ensure a pass assert_attr_equal("fill_value", left, right) assert_attr_equal("dtype", left, right) assert_numpy_array_equal(left.to_dense(), right.to_dense()) # ----------------------------------------------------------------------------- # Others def assert_contains_all(iterable, dic): for k in iterable: assert k in dic, f"Did not contain item: {repr(k)}" def assert_copy(iter1, iter2, **eql_kwargs): """ iter1, iter2: iterables that produce elements comparable with assert_almost_equal Checks that the elements are equal, but not the same object. (Does not check that items in sequences are also not the same object) """ for elem1, elem2 in zip(iter1, iter2): assert_almost_equal(elem1, elem2, **eql_kwargs) msg = ( f"Expected object {repr(type(elem1))} and object {repr(type(elem2))} to be " "different objects, but they were the same object." ) assert elem1 is not elem2, msg def is_extension_array_dtype_and_needs_i8_conversion(left_dtype, right_dtype) -> bool: """ Checks that we have the combination of an ExtensionArraydtype and a dtype that should be converted to int64 Returns ------- bool Related to issue #37609 """ return is_extension_array_dtype(left_dtype) and needs_i8_conversion(right_dtype) def getCols(k): return string.ascii_uppercase[:k] # make index def makeStringIndex(k=10, name=None): return Index(rands_array(nchars=10, size=k), name=name) def makeUnicodeIndex(k=10, name=None): return Index(randu_array(nchars=10, size=k), name=name) def makeCategoricalIndex(k=10, n=3, name=None, **kwargs): """ make a length k index or n categories """ x = rands_array(nchars=4, size=n) return CategoricalIndex( Categorical.from_codes(np.arange(k) % n, categories=x), name=name, **kwargs ) def makeIntervalIndex(k=10, name=None, **kwargs): """ make a length k IntervalIndex """ x = np.linspace(0, 100, num=(k + 1)) return IntervalIndex.from_breaks(x, name=name, **kwargs) def makeBoolIndex(k=10, name=None): if k == 1: return Index([True], name=name) elif k == 2: return Index([False, True], name=name) return Index([False, True] + [False] * (k - 2), name=name) def makeIntIndex(k=10, name=None): return Index(list(range(k)), name=name) def makeUIntIndex(k=10, name=None): return Index([2 ** 63 + i for i in range(k)], name=name) def makeRangeIndex(k=10, name=None, **kwargs): return RangeIndex(0, k, 1, name=name, **kwargs) def makeFloatIndex(k=10, name=None): values = sorted(np.random.random_sample(k)) - np.random.random_sample(1) return Index(values * (10 ** np.random.randint(0, 9)), name=name) def makeDateIndex(k=10, freq="B", name=None, **kwargs): dt = datetime(2000, 1, 1) dr = bdate_range(dt, periods=k, freq=freq, name=name) return DatetimeIndex(dr, name=name, **kwargs) def makeTimedeltaIndex(k=10, freq="D", name=None, **kwargs): return pd.timedelta_range(start="1 day", periods=k, freq=freq, name=name, **kwargs) def makePeriodIndex(k=10, name=None, **kwargs): dt = datetime(2000, 1, 1) return pd.period_range(start=dt, periods=k, freq="B", name=name, **kwargs) def makeMultiIndex(k=10, names=None, **kwargs): return MultiIndex.from_product((("foo", "bar"), (1, 2)), names=names, **kwargs) _names = [ "Alice", "Bob", "Charlie", "Dan", "Edith", "Frank", "George", "Hannah", "Ingrid", "Jerry", "Kevin", "Laura", "Michael", "Norbert", "Oliver", "Patricia", "Quinn", "Ray", "Sarah", "Tim", "Ursula", "Victor", "Wendy", "Xavier", "Yvonne", "Zelda", ] def _make_timeseries(start="2000-01-01", end="2000-12-31", freq="1D", seed=None): """ Make a DataFrame with a DatetimeIndex Parameters ---------- start : str or Timestamp, default "2000-01-01" The start of the index. Passed to date_range with `freq`. end : str or Timestamp, default "2000-12-31" The end of the index. Passed to date_range with `freq`. freq : str or Freq The frequency to use for the DatetimeIndex seed : int, optional The random state seed. * name : object dtype with string names * id : int dtype with * x, y : float dtype Examples -------- >>> _make_timeseries() id name x y timestamp 2000-01-01 982 Frank 0.031261 0.986727 2000-01-02 1025 Edith -0.086358 -0.032920 2000-01-03 982 Edith 0.473177 0.298654 2000-01-04 1009 Sarah 0.534344 -0.750377 2000-01-05 963 Zelda -0.271573 0.054424 ... ... ... ... ... 2000-12-27 980 Ingrid -0.132333 -0.422195 2000-12-28 972 Frank -0.376007 -0.298687 2000-12-29 1009 Ursula -0.865047 -0.503133 2000-12-30 1000 Hannah -0.063757 -0.507336 2000-12-31 972 Tim -0.869120 0.531685 """ index = pd.date_range(start=start, end=end, freq=freq, name="timestamp") n = len(index) state = np.random.RandomState(seed) columns = { "name": state.choice(_names, size=n), "id": state.poisson(1000, size=n), "x": state.rand(n) * 2 - 1, "y": state.rand(n) * 2 - 1, } df = pd.DataFrame(columns, index=index, columns=sorted(columns)) if df.index[-1] == end: df = df.iloc[:-1] return df def index_subclass_makers_generator(): make_index_funcs = [ makeDateIndex, makePeriodIndex, makeTimedeltaIndex, makeRangeIndex, makeIntervalIndex, makeCategoricalIndex, makeMultiIndex, ] yield from make_index_funcs def all_timeseries_index_generator(k=10): """ Generator which can be iterated over to get instances of all the classes which represent time-series. Parameters ---------- k: length of each of the index instances """ make_index_funcs = [makeDateIndex, makePeriodIndex, makeTimedeltaIndex] for make_index_func in make_index_funcs: # pandas\_testing.py:1986: error: Cannot call function of unknown type yield make_index_func(k=k) # type: ignore[operator] # make series def makeFloatSeries(name=None): index = makeStringIndex(_N) return Series(randn(_N), index=index, name=name) def makeStringSeries(name=None): index = makeStringIndex(_N) return Series(randn(_N), index=index, name=name) def makeObjectSeries(name=None): data = makeStringIndex(_N) data = Index(data, dtype=object) index = makeStringIndex(_N) return Series(data, index=index, name=name) def getSeriesData(): index = makeStringIndex(_N) return {c: Series(randn(_N), index=index) for c in getCols(_K)} def makeTimeSeries(nper=None, freq="B", name=None): if nper is None: nper = _N return Series(randn(nper), index=makeDateIndex(nper, freq=freq), name=name) def makePeriodSeries(nper=None, name=None): if nper is None: nper = _N return Series(randn(nper), index=makePeriodIndex(nper), name=name) def getTimeSeriesData(nper=None, freq="B"): return {c: makeTimeSeries(nper, freq) for c in getCols(_K)} def getPeriodData(nper=None): return {c: makePeriodSeries(nper) for c in getCols(_K)} # make frame def makeTimeDataFrame(nper=None, freq="B"): data = getTimeSeriesData(nper, freq) return DataFrame(data) def makeDataFrame(): data = getSeriesData() return DataFrame(data) def getMixedTypeDict(): index = Index(["a", "b", "c", "d", "e"]) data = { "A": [0.0, 1.0, 2.0, 3.0, 4.0], "B": [0.0, 1.0, 0.0, 1.0, 0.0], "C": ["foo1", "foo2", "foo3", "foo4", "foo5"], "D": bdate_range("1/1/2009", periods=5), } return index, data def makeMixedDataFrame(): return DataFrame(getMixedTypeDict()[1]) def makePeriodFrame(nper=None): data = getPeriodData(nper) return DataFrame(data) def makeCustomIndex( nentries, nlevels, prefix="#", names=False, ndupe_l=None, idx_type=None ): """ Create an index/multindex with given dimensions, levels, names, etc' nentries - number of entries in index nlevels - number of levels (> 1 produces multindex) prefix - a string prefix for labels names - (Optional), bool or list of strings. if True will use default names, if false will use no names, if a list is given, the name of each level in the index will be taken from the list. ndupe_l - (Optional), list of ints, the number of rows for which the label will repeated at the corresponding level, you can specify just the first few, the rest will use the default ndupe_l of 1. len(ndupe_l) <= nlevels. idx_type - "i"/"f"/"s"/"u"/"dt"/"p"/"td". If idx_type is not None, `idx_nlevels` must be 1. "i"/"f" creates an integer/float index, "s"/"u" creates a string/unicode index "dt" create a datetime index. "td" create a datetime index. if unspecified, string labels will be generated. """ if ndupe_l is None: ndupe_l = [1] * nlevels assert is_sequence(ndupe_l) and len(ndupe_l) <= nlevels assert names is None or names is False or names is True or len(names) is nlevels assert idx_type is None or ( idx_type in ("i", "f", "s", "u", "dt", "p", "td") and nlevels == 1 ) if names is True: # build default names names = [prefix + str(i) for i in range(nlevels)] if names is False: # pass None to index constructor for no name names = None # make singleton case uniform if isinstance(names, str) and nlevels == 1: names = [names] # specific 1D index type requested? idx_func = { "i": makeIntIndex, "f": makeFloatIndex, "s": makeStringIndex, "u": makeUnicodeIndex, "dt": makeDateIndex, "td": makeTimedeltaIndex, "p": makePeriodIndex, }.get(idx_type) if idx_func: # pandas\_testing.py:2120: error: Cannot call function of unknown type idx = idx_func(nentries) # type: ignore[operator] # but we need to fill in the name if names: idx.name = names[0] return idx elif idx_type is not None: raise ValueError( f"{repr(idx_type)} is not a legal value for `idx_type`, " "use 'i'/'f'/'s'/'u'/'dt'/'p'/'td'." ) if len(ndupe_l) < nlevels: ndupe_l.extend([1] * (nlevels - len(ndupe_l))) assert len(ndupe_l) == nlevels assert all(x > 0 for x in ndupe_l) tuples = [] for i in range(nlevels): def keyfunc(x): import re numeric_tuple = re.sub(r"[^\d_]_?", "", x).split("_") return [int(num) for num in numeric_tuple] # build a list of lists to create the index from div_factor = nentries // ndupe_l[i] + 1 # pandas\_testing.py:2148: error: Need type annotation for 'cnt' cnt = Counter() # type: ignore[var-annotated] for j in range(div_factor): label = f"{prefix}_l{i}_g{j}" cnt[label] = ndupe_l[i] # cute Counter trick result = sorted(cnt.elements(), key=keyfunc)[:nentries] tuples.append(result) tuples = list(zip(*tuples)) # convert tuples to index if nentries == 1: # we have a single level of tuples, i.e. a regular Index index = Index(tuples[0], name=names[0]) elif nlevels == 1: name = None if names is None else names[0] index = Index((x[0] for x in tuples), name=name) else: index = MultiIndex.from_tuples(tuples, names=names) return index def makeCustomDataframe( nrows, ncols, c_idx_names=True, r_idx_names=True, c_idx_nlevels=1, r_idx_nlevels=1, data_gen_f=None, c_ndupe_l=None, r_ndupe_l=None, dtype=None, c_idx_type=None, r_idx_type=None, ): """ Create a DataFrame using supplied parameters. Parameters ---------- nrows, ncols - number of data rows/cols c_idx_names, idx_names - False/True/list of strings, yields No names , default names or uses the provided names for the levels of the corresponding index. You can provide a single string when c_idx_nlevels ==1. c_idx_nlevels - number of levels in columns index. > 1 will yield MultiIndex r_idx_nlevels - number of levels in rows index. > 1 will yield MultiIndex data_gen_f - a function f(row,col) which return the data value at that position, the default generator used yields values of the form "RxCy" based on position. c_ndupe_l, r_ndupe_l - list of integers, determines the number of duplicates for each label at a given level of the corresponding index. The default `None` value produces a multiplicity of 1 across all levels, i.e. a unique index. Will accept a partial list of length N < idx_nlevels, for just the first N levels. If ndupe doesn't divide nrows/ncol, the last label might have lower multiplicity. dtype - passed to the DataFrame constructor as is, in case you wish to have more control in conjunction with a custom `data_gen_f` r_idx_type, c_idx_type - "i"/"f"/"s"/"u"/"dt"/"td". If idx_type is not None, `idx_nlevels` must be 1. "i"/"f" creates an integer/float index, "s"/"u" creates a string/unicode index "dt" create a datetime index. "td" create a timedelta index. if unspecified, string labels will be generated. Examples -------- # 5 row, 3 columns, default names on both, single index on both axis >> makeCustomDataframe(5,3) # make the data a random int between 1 and 100 >> mkdf(5,3,data_gen_f=lambda r,c:randint(1,100)) # 2-level multiindex on rows with each label duplicated # twice on first level, default names on both axis, single # index on both axis >> a=makeCustomDataframe(5,3,r_idx_nlevels=2,r_ndupe_l=[2]) # DatetimeIndex on row, index with unicode labels on columns # no names on either axis >> a=makeCustomDataframe(5,3,c_idx_names=False,r_idx_names=False, r_idx_type="dt",c_idx_type="u") # 4-level multindex on rows with names provided, 2-level multindex # on columns with default labels and default names. >> a=makeCustomDataframe(5,3,r_idx_nlevels=4, r_idx_names=["FEE","FI","FO","FAM"], c_idx_nlevels=2) >> a=mkdf(5,3,r_idx_nlevels=2,c_idx_nlevels=4) """ assert c_idx_nlevels > 0 assert r_idx_nlevels > 0 assert r_idx_type is None or ( r_idx_type in ("i", "f", "s", "u", "dt", "p", "td") and r_idx_nlevels == 1 ) assert c_idx_type is None or ( c_idx_type in ("i", "f", "s", "u", "dt", "p", "td") and c_idx_nlevels == 1 ) columns = makeCustomIndex( ncols, nlevels=c_idx_nlevels, prefix="C", names=c_idx_names, ndupe_l=c_ndupe_l, idx_type=c_idx_type, ) index = makeCustomIndex( nrows, nlevels=r_idx_nlevels, prefix="R", names=r_idx_names, ndupe_l=r_ndupe_l, idx_type=r_idx_type, ) # by default, generate data based on location if data_gen_f is None: data_gen_f = lambda r, c: f"R{r}C{c}" data = [[data_gen_f(r, c) for c in range(ncols)] for r in range(nrows)] return DataFrame(data, index, columns, dtype=dtype) def _create_missing_idx(nrows, ncols, density, random_state=None): if random_state is None: random_state = np.random else: random_state = np.random.RandomState(random_state) # below is cribbed from scipy.sparse size = int(np.round((1 - density) * nrows * ncols)) # generate a few more to ensure unique values min_rows = 5 fac = 1.02 extra_size = min(size + min_rows, fac * size) def _gen_unique_rand(rng, _extra_size): ind = rng.rand(int(_extra_size)) return np.unique(np.floor(ind * nrows * ncols))[:size] ind = _gen_unique_rand(random_state, extra_size) while ind.size < size: extra_size *= 1.05 ind = _gen_unique_rand(random_state, extra_size) j = np.floor(ind * 1.0 / nrows).astype(int) i = (ind - j * nrows).astype(int) return i.tolist(), j.tolist() def makeMissingDataframe(density=0.9, random_state=None): df = makeDataFrame() # pandas\_testing.py:2306: error: "_create_missing_idx" gets multiple # values for keyword argument "density" [misc] # pandas\_testing.py:2306: error: "_create_missing_idx" gets multiple # values for keyword argument "random_state" [misc] i, j = _create_missing_idx( # type: ignore[misc] *df.shape, density=density, random_state=random_state ) df.values[i, j] = np.nan return df def optional_args(decorator): """ allows a decorator to take optional positional and keyword arguments. Assumes that taking a single, callable, positional argument means that it is decorating a function, i.e. something like this:: @my_decorator def function(): pass Calls decorator with decorator(f, *args, **kwargs) """ @wraps(decorator) def wrapper(*args, **kwargs): def dec(f): return decorator(f, *args, **kwargs) is_decorating = not kwargs and len(args) == 1 and callable(args[0]) if is_decorating: f = args[0] # pandas\_testing.py:2331: error: Incompatible types in assignment # (expression has type "List[]", variable has type # "Tuple[Any, ...]") args = [] # type: ignore[assignment] return dec(f) else: return dec return wrapper # skip tests on exceptions with this message _network_error_messages = ( # 'urlopen error timed out', # 'timeout: timed out', # 'socket.timeout: timed out', "timed out", "Server Hangup", "HTTP Error 503: Service Unavailable", "502: Proxy Error", "HTTP Error 502: internal error", "HTTP Error 502", "HTTP Error 503", "HTTP Error 403", "HTTP Error 400", "Temporary failure in name resolution", "Name or service not known", "Connection refused", "certificate verify", ) # or this e.errno/e.reason.errno _network_errno_vals = ( 101, # Network is unreachable 111, # Connection refused 110, # Connection timed out 104, # Connection reset Error 54, # Connection reset by peer 60, # urllib.error.URLError: [Errno 60] Connection timed out ) # Both of the above shouldn't mask real issues such as 404's # or refused connections (changed DNS). # But some tests (test_data yahoo) contact incredibly flakey # servers. # and conditionally raise on exception types in _get_default_network_errors def _get_default_network_errors(): # Lazy import for http.client because it imports many things from the stdlib import http.client return (IOError, http.client.HTTPException, TimeoutError) def can_connect(url, error_classes=None): """ Try to connect to the given url. True if succeeds, False if IOError raised Parameters ---------- url : basestring The URL to try to connect to Returns ------- connectable : bool Return True if no IOError (unable to connect) or URLError (bad url) was raised """ if error_classes is None: error_classes = _get_default_network_errors() try: with urlopen(url): pass except error_classes: return False else: return True @optional_args def network( t, url="https://www.google.com", raise_on_error=_RAISE_NETWORK_ERROR_DEFAULT, check_before_test=False, error_classes=None, skip_errnos=_network_errno_vals, _skip_on_messages=_network_error_messages, ): """ Label a test as requiring network connection and, if an error is encountered, only raise if it does not find a network connection. In comparison to ``network``, this assumes an added contract to your test: you must assert that, under normal conditions, your test will ONLY fail if it does not have network connectivity. You can call this in 3 ways: as a standard decorator, with keyword arguments, or with a positional argument that is the url to check. Parameters ---------- t : callable The test requiring network connectivity. url : path The url to test via ``pandas.io.common.urlopen`` to check for connectivity. Defaults to 'https://www.google.com'. raise_on_error : bool If True, never catches errors. check_before_test : bool If True, checks connectivity before running the test case. error_classes : tuple or Exception error classes to ignore. If not in ``error_classes``, raises the error. defaults to IOError. Be careful about changing the error classes here. skip_errnos : iterable of int Any exception that has .errno or .reason.erno set to one of these values will be skipped with an appropriate message. _skip_on_messages: iterable of string any exception e for which one of the strings is a substring of str(e) will be skipped with an appropriate message. Intended to suppress errors where an errno isn't available. Notes ----- * ``raise_on_error`` supersedes ``check_before_test`` Returns ------- t : callable The decorated test ``t``, with checks for connectivity errors. Example ------- Tests decorated with @network will fail if it's possible to make a network connection to another URL (defaults to google.com):: >>> from pandas._testing import network >>> from pandas.io.common import urlopen >>> @network ... def test_network(): ... with urlopen("rabbit://bonanza.com"): ... pass Traceback ... URLError: You can specify alternative URLs:: >>> @network("https://www.yahoo.com") ... def test_something_with_yahoo(): ... raise IOError("Failure Message") >>> test_something_with_yahoo() Traceback (most recent call last): ... IOError: Failure Message If you set check_before_test, it will check the url first and not run the test on failure:: >>> @network("failing://url.blaher", check_before_test=True) ... def test_something(): ... print("I ran!") ... raise ValueError("Failure") >>> test_something() Traceback (most recent call last): ... Errors not related to networking will always be raised. """ from pytest import skip if error_classes is None: error_classes = _get_default_network_errors() t.network = True @wraps(t) def wrapper(*args, **kwargs): if ( check_before_test and not raise_on_error and not can_connect(url, error_classes) ): skip() try: return t(*args, **kwargs) except Exception as err: errno = getattr(err, "errno", None) if not errno and hasattr(errno, "reason"): # pandas\_testing.py:2521: error: "Exception" has no attribute # "reason" errno = getattr(err.reason, "errno", None) # type: ignore[attr-defined] if errno in skip_errnos: skip(f"Skipping test due to known errno and error {err}") e_str = str(err) if any(m.lower() in e_str.lower() for m in _skip_on_messages): skip( f"Skipping test because exception message is known and error {err}" ) if not isinstance(err, error_classes): raise if raise_on_error or can_connect(url, error_classes): raise else: skip(f"Skipping test due to lack of connectivity and error {err}") return wrapper with_connectivity_check = network @contextmanager def assert_produces_warning( expected_warning: Optional[Union[Type[Warning], bool]] = Warning, filter_level="always", check_stacklevel: bool = True, raise_on_extra_warnings: bool = True, match: Optional[str] = None, ): """ Context manager for running code expected to either raise a specific warning, or not raise any warnings. Verifies that the code raises the expected warning, and that it does not raise any other unexpected warnings. It is basically a wrapper around ``warnings.catch_warnings``. Parameters ---------- expected_warning : {Warning, False, None}, default Warning The type of Exception raised. ``exception.Warning`` is the base class for all warnings. To check that no warning is returned, specify ``False`` or ``None``. filter_level : str or None, default "always" Specifies whether warnings are ignored, displayed, or turned into errors. Valid values are: * "error" - turns matching warnings into exceptions * "ignore" - discard the warning * "always" - always emit a warning * "default" - print the warning the first time it is generated from each location * "module" - print the warning the first time it is generated from each module * "once" - print the warning the first time it is generated check_stacklevel : bool, default True If True, displays the line that called the function containing the warning to show were the function is called. Otherwise, the line that implements the function is displayed. raise_on_extra_warnings : bool, default True Whether extra warnings not of the type `expected_warning` should cause the test to fail. match : str, optional Match warning message. Examples -------- >>> import warnings >>> with assert_produces_warning(): ... warnings.warn(UserWarning()) ... >>> with assert_produces_warning(False): ... warnings.warn(RuntimeWarning()) ... Traceback (most recent call last): ... AssertionError: Caused unexpected warning(s): ['RuntimeWarning']. >>> with assert_produces_warning(UserWarning): ... warnings.warn(RuntimeWarning()) Traceback (most recent call last): ... AssertionError: Did not see expected warning of class 'UserWarning'. ..warn:: This is *not* thread-safe. """ __tracebackhide__ = True with warnings.catch_warnings(record=True) as w: saw_warning = False matched_message = False warnings.simplefilter(filter_level) yield w extra_warnings = [] for actual_warning in w: if not expected_warning: continue expected_warning = cast(Type[Warning], expected_warning) if issubclass(actual_warning.category, expected_warning): saw_warning = True if check_stacklevel and issubclass( actual_warning.category, (FutureWarning, DeprecationWarning) ): _assert_raised_with_correct_stacklevel(actual_warning) if match is not None and re.search(match, str(actual_warning.message)): matched_message = True else: extra_warnings.append( ( actual_warning.category.__name__, actual_warning.message, actual_warning.filename, actual_warning.lineno, ) ) if expected_warning: expected_warning = cast(Type[Warning], expected_warning) if not saw_warning: raise AssertionError( f"Did not see expected warning of class " f"{repr(expected_warning.__name__)}" ) if match and not matched_message: raise AssertionError( f"Did not see warning {repr(expected_warning.__name__)} " f"matching {match}" ) if raise_on_extra_warnings and extra_warnings: raise AssertionError( f"Caused unexpected warning(s): {repr(extra_warnings)}" ) def _assert_raised_with_correct_stacklevel( actual_warning: warnings.WarningMessage, ) -> None: from inspect import getframeinfo, stack caller = getframeinfo(stack()[3][0]) msg = ( "Warning not set with correct stacklevel. " f"File where warning is raised: {actual_warning.filename} != " f"{caller.filename}. Warning message: {actual_warning.message}" ) assert actual_warning.filename == caller.filename, msg class RNGContext: """ Context manager to set the numpy random number generator speed. Returns to the original value upon exiting the context manager. Parameters ---------- seed : int Seed for numpy.random.seed Examples -------- with RNGContext(42): np.random.randn() """ def __init__(self, seed): self.seed = seed def __enter__(self): self.start_state = np.random.get_state() np.random.seed(self.seed) def __exit__(self, exc_type, exc_value, traceback): np.random.set_state(self.start_state) @contextmanager def with_csv_dialect(name, **kwargs): """ Context manager to temporarily register a CSV dialect for parsing CSV. Parameters ---------- name : str The name of the dialect. kwargs : mapping The parameters for the dialect. Raises ------ ValueError : the name of the dialect conflicts with a builtin one. See Also -------- csv : Python's CSV library. """ import csv _BUILTIN_DIALECTS = {"excel", "excel-tab", "unix"} if name in _BUILTIN_DIALECTS: raise ValueError("Cannot override builtin dialect.") csv.register_dialect(name, **kwargs) yield csv.unregister_dialect(name) @contextmanager def use_numexpr(use, min_elements=None): from pandas.core.computation import expressions as expr if min_elements is None: min_elements = expr._MIN_ELEMENTS olduse = expr.USE_NUMEXPR oldmin = expr._MIN_ELEMENTS expr.set_use_numexpr(use) expr._MIN_ELEMENTS = min_elements yield expr._MIN_ELEMENTS = oldmin expr.set_use_numexpr(olduse) def test_parallel(num_threads=2, kwargs_list=None): """ Decorator to run the same function multiple times in parallel. Parameters ---------- num_threads : int, optional The number of times the function is run in parallel. kwargs_list : list of dicts, optional The list of kwargs to update original function kwargs on different threads. Notes ----- This decorator does not pass the return value of the decorated function. Original from scikit-image: https://github.com/scikit-image/scikit-image/pull/1519 """ assert num_threads > 0 has_kwargs_list = kwargs_list is not None if has_kwargs_list: assert len(kwargs_list) == num_threads import threading def wrapper(func): @wraps(func) def inner(*args, **kwargs): if has_kwargs_list: update_kwargs = lambda i: dict(kwargs, **kwargs_list[i]) else: update_kwargs = lambda i: kwargs threads = [] for i in range(num_threads): updated_kwargs = update_kwargs(i) thread = threading.Thread(target=func, args=args, kwargs=updated_kwargs) threads.append(thread) for thread in threads: thread.start() for thread in threads: thread.join() return inner return wrapper class SubclassedSeries(Series): _metadata = ["testattr", "name"] @property def _constructor(self): return SubclassedSeries @property def _constructor_expanddim(self): return SubclassedDataFrame class SubclassedDataFrame(DataFrame): _metadata = ["testattr"] @property def _constructor(self): return SubclassedDataFrame @property def _constructor_sliced(self): return SubclassedSeries class SubclassedCategorical(Categorical): @property def _constructor(self): return SubclassedCategorical @contextmanager def set_timezone(tz: str): """ Context manager for temporarily setting a timezone. Parameters ---------- tz : str A string representing a valid timezone. Examples -------- >>> from datetime import datetime >>> from dateutil.tz import tzlocal >>> tzlocal().tzname(datetime.now()) 'IST' >>> with set_timezone('US/Eastern'): ... tzlocal().tzname(datetime.now()) ... 'EDT' """ import os import time def setTZ(tz): if tz is None: try: del os.environ["TZ"] except KeyError: pass else: os.environ["TZ"] = tz time.tzset() orig_tz = os.environ.get("TZ") setTZ(tz) try: yield finally: setTZ(orig_tz) def _make_skipna_wrapper(alternative, skipna_alternative=None): """ Create a function for calling on an array. Parameters ---------- alternative : function The function to be called on the array with no NaNs. Only used when 'skipna_alternative' is None. skipna_alternative : function The function to be called on the original array Returns ------- function """ if skipna_alternative: def skipna_wrapper(x): return skipna_alternative(x.values) else: def skipna_wrapper(x): nona = x.dropna() if len(nona) == 0: return np.nan return alternative(nona) return skipna_wrapper def convert_rows_list_to_csv_str(rows_list: List[str]): """ Convert list of CSV rows to single CSV-formatted string for current OS. This method is used for creating expected value of to_csv() method. Parameters ---------- rows_list : List[str] Each element represents the row of csv. Returns ------- str Expected output of to_csv() in current OS. """ sep = os.linesep return sep.join(rows_list) + sep def external_error_raised(expected_exception: Type[Exception]) -> ContextManager: """ Helper function to mark pytest.raises that have an external error message. Parameters ---------- expected_exception : Exception Expected error to raise. Returns ------- Callable Regular `pytest.raises` function with `match` equal to `None`. """ import pytest return pytest.raises(expected_exception, match=None) cython_table = pd.core.base.SelectionMixin._cython_table.items() def get_cython_table_params(ndframe, func_names_and_expected): """ Combine frame, functions from SelectionMixin._cython_table keys and expected result. Parameters ---------- ndframe : DataFrame or Series func_names_and_expected : Sequence of two items The first item is a name of a NDFrame method ('sum', 'prod') etc. The second item is the expected return value. Returns ------- list List of three items (DataFrame, function, expected result) """ results = [] for func_name, expected in func_names_and_expected: results.append((ndframe, func_name, expected)) results += [ (ndframe, func, expected) for func, name in cython_table if name == func_name ] return results def get_op_from_name(op_name: str) -> Callable: """ The operator function for a given op name. Parameters ---------- op_name : string The op name, in form of "add" or "__add__". Returns ------- function A function performing the operation. """ short_opname = op_name.strip("_") try: op = getattr(operator, short_opname) except AttributeError: # Assume it is the reverse operator rop = getattr(operator, short_opname[1:]) op = lambda x, y: rop(y, x) return op