575 lines
20 KiB
Python
575 lines
20 KiB
Python
from collections import abc, deque
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from decimal import Decimal
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from warnings import catch_warnings
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import numpy as np
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import pytest
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import pandas as pd
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from pandas import DataFrame, Index, MultiIndex, Series, concat, date_range
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import pandas._testing as tm
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from pandas.core.arrays import SparseArray
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from pandas.core.construction import create_series_with_explicit_dtype
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from pandas.tests.extension.decimal import to_decimal
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class TestConcatenate:
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def test_concat_copy(self):
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df = DataFrame(np.random.randn(4, 3))
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df2 = DataFrame(np.random.randint(0, 10, size=4).reshape(4, 1))
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df3 = DataFrame({5: "foo"}, index=range(4))
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# These are actual copies.
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result = concat([df, df2, df3], axis=1, copy=True)
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for b in result._mgr.blocks:
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assert b.values.base is None
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# These are the same.
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result = concat([df, df2, df3], axis=1, copy=False)
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for b in result._mgr.blocks:
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if b.is_float:
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assert b.values.base is df._mgr.blocks[0].values.base
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elif b.is_integer:
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assert b.values.base is df2._mgr.blocks[0].values.base
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elif b.is_object:
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assert b.values.base is not None
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# Float block was consolidated.
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df4 = DataFrame(np.random.randn(4, 1))
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result = concat([df, df2, df3, df4], axis=1, copy=False)
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for b in result._mgr.blocks:
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if b.is_float:
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assert b.values.base is None
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elif b.is_integer:
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assert b.values.base is df2._mgr.blocks[0].values.base
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elif b.is_object:
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assert b.values.base is not None
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def test_concat_with_group_keys(self):
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df = DataFrame(np.random.randn(4, 3))
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df2 = DataFrame(np.random.randn(4, 4))
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# axis=0
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df = DataFrame(np.random.randn(3, 4))
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df2 = DataFrame(np.random.randn(4, 4))
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result = concat([df, df2], keys=[0, 1])
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exp_index = MultiIndex.from_arrays(
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[[0, 0, 0, 1, 1, 1, 1], [0, 1, 2, 0, 1, 2, 3]]
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)
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expected = DataFrame(np.r_[df.values, df2.values], index=exp_index)
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tm.assert_frame_equal(result, expected)
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result = concat([df, df], keys=[0, 1])
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exp_index2 = MultiIndex.from_arrays([[0, 0, 0, 1, 1, 1], [0, 1, 2, 0, 1, 2]])
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expected = DataFrame(np.r_[df.values, df.values], index=exp_index2)
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tm.assert_frame_equal(result, expected)
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# axis=1
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df = DataFrame(np.random.randn(4, 3))
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df2 = DataFrame(np.random.randn(4, 4))
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result = concat([df, df2], keys=[0, 1], axis=1)
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expected = DataFrame(np.c_[df.values, df2.values], columns=exp_index)
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tm.assert_frame_equal(result, expected)
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result = concat([df, df], keys=[0, 1], axis=1)
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expected = DataFrame(np.c_[df.values, df.values], columns=exp_index2)
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tm.assert_frame_equal(result, expected)
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def test_concat_keys_specific_levels(self):
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df = DataFrame(np.random.randn(10, 4))
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pieces = [df.iloc[:, [0, 1]], df.iloc[:, [2]], df.iloc[:, [3]]]
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level = ["three", "two", "one", "zero"]
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result = concat(
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pieces,
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axis=1,
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keys=["one", "two", "three"],
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levels=[level],
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names=["group_key"],
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)
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tm.assert_index_equal(result.columns.levels[0], Index(level, name="group_key"))
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tm.assert_index_equal(result.columns.levels[1], Index([0, 1, 2, 3]))
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assert result.columns.names == ["group_key", None]
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@pytest.mark.parametrize("mapping", ["mapping", "dict"])
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def test_concat_mapping(self, mapping, non_dict_mapping_subclass):
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constructor = dict if mapping == "dict" else non_dict_mapping_subclass
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frames = constructor(
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{
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"foo": DataFrame(np.random.randn(4, 3)),
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"bar": DataFrame(np.random.randn(4, 3)),
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"baz": DataFrame(np.random.randn(4, 3)),
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"qux": DataFrame(np.random.randn(4, 3)),
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}
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)
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sorted_keys = list(frames.keys())
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result = concat(frames)
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expected = concat([frames[k] for k in sorted_keys], keys=sorted_keys)
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tm.assert_frame_equal(result, expected)
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result = concat(frames, axis=1)
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expected = concat([frames[k] for k in sorted_keys], keys=sorted_keys, axis=1)
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tm.assert_frame_equal(result, expected)
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keys = ["baz", "foo", "bar"]
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result = concat(frames, keys=keys)
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expected = concat([frames[k] for k in keys], keys=keys)
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tm.assert_frame_equal(result, expected)
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def test_concat_keys_and_levels(self):
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df = DataFrame(np.random.randn(1, 3))
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df2 = DataFrame(np.random.randn(1, 4))
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levels = [["foo", "baz"], ["one", "two"]]
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names = ["first", "second"]
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result = concat(
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[df, df2, df, df2],
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keys=[("foo", "one"), ("foo", "two"), ("baz", "one"), ("baz", "two")],
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levels=levels,
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names=names,
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)
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expected = concat([df, df2, df, df2])
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exp_index = MultiIndex(
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levels=levels + [[0]],
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codes=[[0, 0, 1, 1], [0, 1, 0, 1], [0, 0, 0, 0]],
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names=names + [None],
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)
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expected.index = exp_index
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tm.assert_frame_equal(result, expected)
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# no names
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result = concat(
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[df, df2, df, df2],
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keys=[("foo", "one"), ("foo", "two"), ("baz", "one"), ("baz", "two")],
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levels=levels,
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)
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assert result.index.names == (None,) * 3
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# no levels
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result = concat(
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[df, df2, df, df2],
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keys=[("foo", "one"), ("foo", "two"), ("baz", "one"), ("baz", "two")],
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names=["first", "second"],
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)
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assert result.index.names == ("first", "second", None)
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tm.assert_index_equal(
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result.index.levels[0], Index(["baz", "foo"], name="first")
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)
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def test_concat_keys_levels_no_overlap(self):
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# GH #1406
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df = DataFrame(np.random.randn(1, 3), index=["a"])
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df2 = DataFrame(np.random.randn(1, 4), index=["b"])
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msg = "Values not found in passed level"
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with pytest.raises(ValueError, match=msg):
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concat([df, df], keys=["one", "two"], levels=[["foo", "bar", "baz"]])
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msg = "Key one not in level"
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with pytest.raises(ValueError, match=msg):
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concat([df, df2], keys=["one", "two"], levels=[["foo", "bar", "baz"]])
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def test_crossed_dtypes_weird_corner(self):
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columns = ["A", "B", "C", "D"]
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df1 = DataFrame(
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{
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"A": np.array([1, 2, 3, 4], dtype="f8"),
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"B": np.array([1, 2, 3, 4], dtype="i8"),
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"C": np.array([1, 2, 3, 4], dtype="f8"),
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"D": np.array([1, 2, 3, 4], dtype="i8"),
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},
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columns=columns,
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)
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df2 = DataFrame(
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{
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"A": np.array([1, 2, 3, 4], dtype="i8"),
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"B": np.array([1, 2, 3, 4], dtype="f8"),
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"C": np.array([1, 2, 3, 4], dtype="i8"),
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"D": np.array([1, 2, 3, 4], dtype="f8"),
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},
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columns=columns,
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)
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appended = df1.append(df2, ignore_index=True)
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expected = DataFrame(
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np.concatenate([df1.values, df2.values], axis=0), columns=columns
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)
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tm.assert_frame_equal(appended, expected)
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df = DataFrame(np.random.randn(1, 3), index=["a"])
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df2 = DataFrame(np.random.randn(1, 4), index=["b"])
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result = concat([df, df2], keys=["one", "two"], names=["first", "second"])
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assert result.index.names == ("first", "second")
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def test_with_mixed_tuples(self, sort):
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# 10697
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# columns have mixed tuples, so handle properly
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df1 = DataFrame({"A": "foo", ("B", 1): "bar"}, index=range(2))
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df2 = DataFrame({"B": "foo", ("B", 1): "bar"}, index=range(2))
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# it works
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concat([df1, df2], sort=sort)
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def test_concat_mixed_objs(self):
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# concat mixed series/frames
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# G2385
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# axis 1
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index = date_range("01-Jan-2013", periods=10, freq="H")
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arr = np.arange(10, dtype="int64")
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s1 = Series(arr, index=index)
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s2 = Series(arr, index=index)
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df = DataFrame(arr.reshape(-1, 1), index=index)
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expected = DataFrame(
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np.repeat(arr, 2).reshape(-1, 2), index=index, columns=[0, 0]
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)
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result = concat([df, df], axis=1)
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tm.assert_frame_equal(result, expected)
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expected = DataFrame(
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np.repeat(arr, 2).reshape(-1, 2), index=index, columns=[0, 1]
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)
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result = concat([s1, s2], axis=1)
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tm.assert_frame_equal(result, expected)
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expected = DataFrame(
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np.repeat(arr, 3).reshape(-1, 3), index=index, columns=[0, 1, 2]
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)
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result = concat([s1, s2, s1], axis=1)
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tm.assert_frame_equal(result, expected)
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expected = DataFrame(
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np.repeat(arr, 5).reshape(-1, 5), index=index, columns=[0, 0, 1, 2, 3]
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)
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result = concat([s1, df, s2, s2, s1], axis=1)
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tm.assert_frame_equal(result, expected)
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# with names
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s1.name = "foo"
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expected = DataFrame(
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np.repeat(arr, 3).reshape(-1, 3), index=index, columns=["foo", 0, 0]
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)
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result = concat([s1, df, s2], axis=1)
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tm.assert_frame_equal(result, expected)
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s2.name = "bar"
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expected = DataFrame(
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np.repeat(arr, 3).reshape(-1, 3), index=index, columns=["foo", 0, "bar"]
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)
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result = concat([s1, df, s2], axis=1)
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tm.assert_frame_equal(result, expected)
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# ignore index
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expected = DataFrame(
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np.repeat(arr, 3).reshape(-1, 3), index=index, columns=[0, 1, 2]
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)
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result = concat([s1, df, s2], axis=1, ignore_index=True)
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tm.assert_frame_equal(result, expected)
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# axis 0
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expected = DataFrame(
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np.tile(arr, 3).reshape(-1, 1), index=index.tolist() * 3, columns=[0]
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)
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result = concat([s1, df, s2])
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tm.assert_frame_equal(result, expected)
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expected = DataFrame(np.tile(arr, 3).reshape(-1, 1), columns=[0])
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result = concat([s1, df, s2], ignore_index=True)
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tm.assert_frame_equal(result, expected)
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def test_dtype_coerceion(self):
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# 12411
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df = DataFrame({"date": [pd.Timestamp("20130101").tz_localize("UTC"), pd.NaT]})
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result = concat([df.iloc[[0]], df.iloc[[1]]])
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tm.assert_series_equal(result.dtypes, df.dtypes)
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# 12045
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import datetime
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df = DataFrame(
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{"date": [datetime.datetime(2012, 1, 1), datetime.datetime(1012, 1, 2)]}
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)
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result = concat([df.iloc[[0]], df.iloc[[1]]])
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tm.assert_series_equal(result.dtypes, df.dtypes)
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# 11594
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df = DataFrame({"text": ["some words"] + [None] * 9})
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result = concat([df.iloc[[0]], df.iloc[[1]]])
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tm.assert_series_equal(result.dtypes, df.dtypes)
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def test_concat_single_with_key(self):
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df = DataFrame(np.random.randn(10, 4))
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result = concat([df], keys=["foo"])
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expected = concat([df, df], keys=["foo", "bar"])
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tm.assert_frame_equal(result, expected[:10])
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def test_concat_exclude_none(self):
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df = DataFrame(np.random.randn(10, 4))
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pieces = [df[:5], None, None, df[5:]]
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result = concat(pieces)
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tm.assert_frame_equal(result, df)
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with pytest.raises(ValueError, match="All objects passed were None"):
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concat([None, None])
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def test_concat_keys_with_none(self):
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# #1649
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df0 = DataFrame([[10, 20, 30], [10, 20, 30], [10, 20, 30]])
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result = concat({"a": None, "b": df0, "c": df0[:2], "d": df0[:1], "e": df0})
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expected = concat({"b": df0, "c": df0[:2], "d": df0[:1], "e": df0})
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tm.assert_frame_equal(result, expected)
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result = concat(
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[None, df0, df0[:2], df0[:1], df0], keys=["a", "b", "c", "d", "e"]
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)
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expected = concat([df0, df0[:2], df0[:1], df0], keys=["b", "c", "d", "e"])
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tm.assert_frame_equal(result, expected)
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def test_concat_bug_1719(self):
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ts1 = tm.makeTimeSeries()
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ts2 = tm.makeTimeSeries()[::2]
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# to join with union
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# these two are of different length!
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left = concat([ts1, ts2], join="outer", axis=1)
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right = concat([ts2, ts1], join="outer", axis=1)
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assert len(left) == len(right)
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def test_concat_bug_2972(self):
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ts0 = Series(np.zeros(5))
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ts1 = Series(np.ones(5))
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ts0.name = ts1.name = "same name"
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result = concat([ts0, ts1], axis=1)
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expected = DataFrame({0: ts0, 1: ts1})
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expected.columns = ["same name", "same name"]
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tm.assert_frame_equal(result, expected)
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def test_concat_bug_3602(self):
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# GH 3602, duplicate columns
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df1 = DataFrame(
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{
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"firmNo": [0, 0, 0, 0],
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"prc": [6, 6, 6, 6],
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"stringvar": ["rrr", "rrr", "rrr", "rrr"],
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}
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)
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df2 = DataFrame(
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{"C": [9, 10, 11, 12], "misc": [1, 2, 3, 4], "prc": [6, 6, 6, 6]}
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)
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expected = DataFrame(
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[
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[0, 6, "rrr", 9, 1, 6],
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[0, 6, "rrr", 10, 2, 6],
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[0, 6, "rrr", 11, 3, 6],
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[0, 6, "rrr", 12, 4, 6],
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]
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)
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expected.columns = ["firmNo", "prc", "stringvar", "C", "misc", "prc"]
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result = concat([df1, df2], axis=1)
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tm.assert_frame_equal(result, expected)
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def test_concat_iterables(self):
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# GH8645 check concat works with tuples, list, generators, and weird
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# stuff like deque and custom iterables
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df1 = DataFrame([1, 2, 3])
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df2 = DataFrame([4, 5, 6])
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expected = DataFrame([1, 2, 3, 4, 5, 6])
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tm.assert_frame_equal(concat((df1, df2), ignore_index=True), expected)
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tm.assert_frame_equal(concat([df1, df2], ignore_index=True), expected)
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tm.assert_frame_equal(
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concat((df for df in (df1, df2)), ignore_index=True), expected
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)
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tm.assert_frame_equal(concat(deque((df1, df2)), ignore_index=True), expected)
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class CustomIterator1:
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def __len__(self) -> int:
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return 2
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def __getitem__(self, index):
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try:
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return {0: df1, 1: df2}[index]
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except KeyError as err:
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raise IndexError from err
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tm.assert_frame_equal(pd.concat(CustomIterator1(), ignore_index=True), expected)
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class CustomIterator2(abc.Iterable):
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def __iter__(self):
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yield df1
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yield df2
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tm.assert_frame_equal(pd.concat(CustomIterator2(), ignore_index=True), expected)
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def test_concat_order(self):
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# GH 17344
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dfs = [DataFrame(index=range(3), columns=["a", 1, None])]
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dfs += [DataFrame(index=range(3), columns=[None, 1, "a"]) for i in range(100)]
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result = pd.concat(dfs, sort=True).columns
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expected = dfs[0].columns
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tm.assert_index_equal(result, expected)
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def test_concat_different_extension_dtypes_upcasts(self):
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a = Series(pd.core.arrays.integer_array([1, 2]))
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b = Series(to_decimal([1, 2]))
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result = pd.concat([a, b], ignore_index=True)
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expected = Series([1, 2, Decimal(1), Decimal(2)], dtype=object)
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tm.assert_series_equal(result, expected)
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def test_concat_ordered_dict(self):
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# GH 21510
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expected = pd.concat(
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[Series(range(3)), Series(range(4))], keys=["First", "Another"]
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)
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result = pd.concat({"First": Series(range(3)), "Another": Series(range(4))})
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tm.assert_series_equal(result, expected)
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@pytest.mark.parametrize("pdt", [Series, pd.DataFrame])
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@pytest.mark.parametrize("dt", np.sctypes["float"])
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def test_concat_no_unnecessary_upcast(dt, pdt):
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# GH 13247
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dims = pdt(dtype=object).ndim
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dfs = [
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pdt(np.array([1], dtype=dt, ndmin=dims)),
|
|
pdt(np.array([np.nan], dtype=dt, ndmin=dims)),
|
|
pdt(np.array([5], dtype=dt, ndmin=dims)),
|
|
]
|
|
x = pd.concat(dfs)
|
|
assert x.values.dtype == dt
|
|
|
|
|
|
@pytest.mark.parametrize("pdt", [create_series_with_explicit_dtype, pd.DataFrame])
|
|
@pytest.mark.parametrize("dt", np.sctypes["int"])
|
|
def test_concat_will_upcast(dt, pdt):
|
|
with catch_warnings(record=True):
|
|
dims = pdt().ndim
|
|
dfs = [
|
|
pdt(np.array([1], dtype=dt, ndmin=dims)),
|
|
pdt(np.array([np.nan], ndmin=dims)),
|
|
pdt(np.array([5], dtype=dt, ndmin=dims)),
|
|
]
|
|
x = pd.concat(dfs)
|
|
assert x.values.dtype == "float64"
|
|
|
|
|
|
def test_concat_empty_and_non_empty_frame_regression():
|
|
# GH 18178 regression test
|
|
df1 = DataFrame({"foo": [1]})
|
|
df2 = DataFrame({"foo": []})
|
|
expected = DataFrame({"foo": [1.0]})
|
|
result = pd.concat([df1, df2])
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_concat_sparse():
|
|
# GH 23557
|
|
a = Series(SparseArray([0, 1, 2]))
|
|
expected = DataFrame(data=[[0, 0], [1, 1], [2, 2]]).astype(
|
|
pd.SparseDtype(np.int64, 0)
|
|
)
|
|
result = pd.concat([a, a], axis=1)
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_concat_dense_sparse():
|
|
# GH 30668
|
|
a = Series(pd.arrays.SparseArray([1, None]), dtype=float)
|
|
b = Series([1], dtype=float)
|
|
expected = Series(data=[1, None, 1], index=[0, 1, 0]).astype(
|
|
pd.SparseDtype(np.float64, None)
|
|
)
|
|
result = pd.concat([a, b], axis=0)
|
|
tm.assert_series_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize("keys", [["e", "f", "f"], ["f", "e", "f"]])
|
|
def test_duplicate_keys(keys):
|
|
# GH 33654
|
|
df = DataFrame({"a": [1, 2, 3], "b": [4, 5, 6]})
|
|
s1 = Series([7, 8, 9], name="c")
|
|
s2 = Series([10, 11, 12], name="d")
|
|
result = concat([df, s1, s2], axis=1, keys=keys)
|
|
expected_values = [[1, 4, 7, 10], [2, 5, 8, 11], [3, 6, 9, 12]]
|
|
expected_columns = MultiIndex.from_tuples(
|
|
[(keys[0], "a"), (keys[0], "b"), (keys[1], "c"), (keys[2], "d")]
|
|
)
|
|
expected = DataFrame(expected_values, columns=expected_columns)
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize(
|
|
"obj",
|
|
[
|
|
tm.SubclassedDataFrame({"A": np.arange(0, 10)}),
|
|
tm.SubclassedSeries(np.arange(0, 10), name="A"),
|
|
],
|
|
)
|
|
def test_concat_preserves_subclass(obj):
|
|
# GH28330 -- preserve subclass
|
|
|
|
result = concat([obj, obj])
|
|
assert isinstance(result, type(obj))
|
|
|
|
|
|
def test_concat_frame_axis0_extension_dtypes():
|
|
# preserve extension dtype (through common_dtype mechanism)
|
|
df1 = DataFrame({"a": pd.array([1, 2, 3], dtype="Int64")})
|
|
df2 = DataFrame({"a": np.array([4, 5, 6])})
|
|
|
|
result = pd.concat([df1, df2], ignore_index=True)
|
|
expected = DataFrame({"a": [1, 2, 3, 4, 5, 6]}, dtype="Int64")
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
result = pd.concat([df2, df1], ignore_index=True)
|
|
expected = DataFrame({"a": [4, 5, 6, 1, 2, 3]}, dtype="Int64")
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
def test_concat_preserves_extension_int64_dtype():
|
|
# GH 24768
|
|
df_a = DataFrame({"a": [-1]}, dtype="Int64")
|
|
df_b = DataFrame({"b": [1]}, dtype="Int64")
|
|
result = pd.concat([df_a, df_b], ignore_index=True)
|
|
expected = DataFrame({"a": [-1, None], "b": [None, 1]}, dtype="Int64")
|
|
tm.assert_frame_equal(result, expected)
|
|
|
|
|
|
@pytest.mark.parametrize(
|
|
("keys", "integrity"),
|
|
[
|
|
(["red"] * 3, True),
|
|
(["red"] * 3, False),
|
|
(["red", "blue", "red"], False),
|
|
(["red", "blue", "red"], True),
|
|
],
|
|
)
|
|
def test_concat_repeated_keys(keys, integrity):
|
|
# GH: 20816
|
|
series_list = [Series({"a": 1}), Series({"b": 2}), Series({"c": 3})]
|
|
result = concat(series_list, keys=keys, verify_integrity=integrity)
|
|
tuples = list(zip(keys, ["a", "b", "c"]))
|
|
expected = Series([1, 2, 3], index=MultiIndex.from_tuples(tuples))
|
|
tm.assert_series_equal(result, expected)
|