Merge pull request 'GA implementation in env' (#1) from Paweł into master
Reviewed-on: #1
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6c905621ca
@ -1,75 +1,81 @@
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import numpy
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import random
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import keyboard as keyboard
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import field as F
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from ga_methods import *
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from src import mapschema as maps
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import ga_methods
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# Genetic Algorithm
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# Genetic Algorithm
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if __name__ == "__main__":
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def genetic_algorithm_setup(field):
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population_units = ["", "w", "p", "s"]
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"""
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# new_population to be
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The y=target is to maximize this equation ASAP:
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population_text = []
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y = w1x1+w2x2+w3x3+w4x4+w5x5+6wx6
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where (x1,x2,x3,x4,x5,x6)=(4,-2,3.5,5,-11,-4.7)
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What are the best values for the 6 weights w1 to w6?
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We are going to use the genetic algorithm for the best possible values after a number of generations.
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"""
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# Inputs of the equation.
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# Populate the population_text array
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equation_inputs = [4, -2, 3.5, 5, -11, -4.7]
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for row in range(D.GSIZE):
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population_text.append([])
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for column in range(D.GSIZE):
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population_text[row].append(random.choice(population_units))
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# Number of the weights we are looking to optimize.
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# printer
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num_weights = len(equation_inputs)
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for _ in population_text:
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print(population_text)
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"""
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"""
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Genetic algorithm parameters:
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Genetic algorithm parameters:
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Mating pool size
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Mating pool size
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Population size
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Population size
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"""
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"""
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# units per population in generation
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sol_per_pop = 8
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sol_per_pop = 8
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num_parents_mating = 4
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num_parents_mating = 4
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# Defining the population size.
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population_values = []
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pop_size = (sol_per_pop,
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fitness_row = []
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num_weights) # The population will have sol_per_pop chromosome where each chromosome has num_weights genes.
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# Creating the initial population.
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new_population = numpy.random.uniform(low=-4.0, high=4.0, size=pop_size)
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print(new_population)
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"""
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# population Fitness
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new_population[0, :] = [2.4, 0.7, 8, -2, 5, 1.1]
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for i in range(0, D.GSIZE):
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new_population[1, :] = [-0.4, 2.7, 5, -1, 7, 0.1]
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for j in range(D.GSIZE):
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new_population[2, :] = [-1, 2, 2, -3, 2, 0.9]
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fitness_row.append(local_fitness(field, i, j, population_text))
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new_population[3, :] = [4, 7, 12, 6.1, 1.4, -4]
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population_values.append(fitness_row)
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new_population[4, :] = [3.1, 4, 0, 2.4, 4.8, 0]
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new_population[5, :] = [-2, 3, -7, 6, 3, 3]
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"""
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best_outputs = []
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best_outputs = []
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num_generations = 1000
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num_generations = 10
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for generation in range(num_generations):
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generation = 0
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while generation < num_generations:
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if keyboard.is_pressed('space'):
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generation += 1
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print("Generation : ", generation)
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print("Generation : ", generation)
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# Measuring the fitness of each chromosome in the population.
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# Measuring the fitness of each chromosome in the population.
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fitness = ga_methods.cal_pop_fitness(equation_inputs, new_population)
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fitness = cal_pop_fitness(population_values)
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print("Fitness")
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print("Fitness")
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print(fitness)
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print(fitness)
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best_outputs.append(numpy.max(numpy.sum(new_population * equation_inputs, axis=1)))
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# best_outputs.append(best_Output(new_population))
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# The best result in the current iteration.
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# The best result in the current iteration.
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print("Best result : ", numpy.max(numpy.sum(new_population * equation_inputs, axis=1)))
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# print("Best result : ", best_Output(new_population))
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# Selecting the best parents in the population for mating.
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# Selecting the best parents in the population for mating.
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parents = ga_methods.select_mating_pool(new_population, fitness,
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parents = select_mating_pool(new_population, fitness,
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num_parents_mating)
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num_parents_mating)
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print("Parents")
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print("Parents")
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print(parents)
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print(parents)
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# Generating next generation using crossover.
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# Generating next generation using crossover.
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offspring_crossover = ga_methods.crossover(parents,
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offspring_crossover = crossover(parents, offspring_size=(pop_size[0] - parents.shape[0], num_weights))
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offspring_size=(pop_size[0] - parents.shape[0], num_weights))
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print("Crossover")
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print("Crossover")
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print(offspring_crossover)
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print(offspring_crossover)
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# Adding some variations to the offspring using mutation.
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# Adding some variations to the offspring using mutation.
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offspring_mutation = ga_methods.mutation(offspring_crossover, num_mutations=2)
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offspring_mutation = mutation(offspring_crossover, num_mutations=2)
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print("Mutation")
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print("Mutation")
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print(offspring_mutation)
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print(offspring_mutation)
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@ -79,7 +85,7 @@ if __name__ == "__main__":
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# Getting the best solution after iterating finishing all generations.
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# Getting the best solution after iterating finishing all generations.
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# At first, the fitness is calculated for each solution in the final generation.
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# At first, the fitness is calculated for each solution in the final generation.
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fitness = ga_methods.cal_pop_fitness(equation_inputs, new_population)
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fitness = cal_pop_fitness(new_population)
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# Then return the index of that solution corresponding to the best fitness.
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# Then return the index of that solution corresponding to the best fitness.
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best_match_idx = numpy.where(fitness == numpy.max(fitness))
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best_match_idx = numpy.where(fitness == numpy.max(fitness))
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@ -92,3 +98,24 @@ if __name__ == "__main__":
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matplotlib.pyplot.xlabel("Iteration")
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matplotlib.pyplot.xlabel("Iteration")
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matplotlib.pyplot.ylabel("Fitness")
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matplotlib.pyplot.ylabel("Fitness")
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matplotlib.pyplot.show()
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matplotlib.pyplot.show()
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# return best iteration of field
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return 0
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if __name__ == "__main__":
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# Define the map of the field
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mapschema = maps.createField()
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# Create field array
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field = []
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# Populate the field array
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for row in range(D.GSIZE):
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field.append([])
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for column in range(D.GSIZE):
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fieldbit = F.Field(row, column, mapschema[column][row])
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field[row].append(fieldbit)
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genetic_algorithm_setup(field)
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@ -1,13 +1,49 @@
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import numpy
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import numpy
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import src.dimensions as D
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# Genetic Algorithm methods
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# Genetic Algorithm methods
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x = "Hello world"
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def local_fitness(field, x, y, plants):
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soil_value = 0
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if field[x][y].field_type == "soil":
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soil_value = 1
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else:
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soil_value = 0.5
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if plants[x][y] == "":
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plant_value = 0
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elif plants[x][y] == "w":
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plant_value = 1
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elif plants[x][y] == "p":
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plant_value = 2
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elif plants[x][y] == "s":
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plant_value = 3
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neighbour_bonus = 1
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if x - 1 >= 0:
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if plants[x][y] == plants[x - 1][y]:
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neighbour_bonus += 1
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if x + 1 < D.GSIZE:
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if plants[x][y] == plants[x + 1][y]:
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neighbour_bonus += 1
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if y - 1 >= 0:
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if plants[x][y] == plants[x][y - 1]:
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neighbour_bonus += 1
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if y + 1 < D.GSIZE:
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if plants[x][y] == plants[x][y + 1]:
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neighbour_bonus += 1
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# TODO * multiculture_bonus
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local_fitness_value = (soil_value + plant_value) * (0.5 * neighbour_bonus + 1)
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return local_fitness_value
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def cal_pop_fitness(equation_inputs, pop):
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def cal_pop_fitness(pop):
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# Calculating the fitness value of each solution in the current population.
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# Calculating the fitness value of each solution in the current population.
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# The fitness function calulates the sum of products between each input and its corresponding weight.
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# The fitness function calulates the sum of products between each input and its corresponding weight.
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fitness = numpy.sum(pop * equation_inputs, axis=1)
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fitness = sum(map(sum, pop))
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return fitness
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return fitness
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@ -50,3 +86,7 @@ def mutation(offspring_crossover, num_mutations=1):
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offspring_crossover[idx, gene_idx] = offspring_crossover[idx, gene_idx] + random_value
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offspring_crossover[idx, gene_idx] = offspring_crossover[idx, gene_idx] + random_value
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gene_idx = gene_idx + mutations_counter
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gene_idx = gene_idx + mutations_counter
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return offspring_crossover
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return offspring_crossover
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def best_Output(new_population):
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return numpy.max(numpy.sum(new_population * equation_inputs, axis=1))
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4
main.py
4
main.py
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fieldbit = F.Field(row, column, mapschema[column][row])
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fieldbit = F.Field(row, column, mapschema[column][row])
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field[row].append(fieldbit)
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field[row].append(fieldbit)
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# genetic_algorithm_setup(field)
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# Create Tractor object
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# Create Tractor object
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tractor = T.Tractor(field, [0, 0])
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tractor = T.Tractor(field, [0, 0])
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# Define the map of plants
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# Define the map of plants
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mapschema = maps.createPlants()
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mapschema = maps.createPlants()
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# Createt plants array
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# Create plants array
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plants = []
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plants = []
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# Populate the plants array
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# Populate the plants array
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