3RNN/Lib/site-packages/sklearn/metrics/_dist_metrics.pxd.tp

{{py:

implementation_specific_values = [
    # Values are the following ones:
    #
    # name_suffix, INPUT_DTYPE_t, INPUT_DTYPE
    ('64', 'float64_t', 'np.float64'),
    ('32', 'float32_t', 'np.float32')
]

}}
from libc.math cimport sqrt, exp

from ..utils._typedefs cimport float64_t, float32_t, int32_t, intp_t

cdef class DistanceMetric:
    pass

{{for name_suffix, INPUT_DTYPE_t, INPUT_DTYPE in implementation_specific_values}}

######################################################################
# Inline distance functions
#
#  We use these for the default (euclidean) case so that they can be
#  inlined.  This leads to faster computation for the most common case
cdef inline float64_t euclidean_dist{{name_suffix}}(
    const {{INPUT_DTYPE_t}}* x1,
    const {{INPUT_DTYPE_t}}* x2,
    intp_t size,
) except -1 nogil:
    cdef float64_t tmp, d=0
    cdef intp_t j
    for j in range(size):
        tmp = <float64_t> (x1[j] - x2[j])
        d += tmp * tmp
    return sqrt(d)


cdef inline float64_t euclidean_rdist{{name_suffix}}(
    const {{INPUT_DTYPE_t}}* x1,
    const {{INPUT_DTYPE_t}}* x2,
    intp_t size,
) except -1 nogil:
    cdef float64_t tmp, d=0
    cdef intp_t j
    for j in range(size):
        tmp = <float64_t>(x1[j] - x2[j])
        d += tmp * tmp
    return d


cdef inline float64_t euclidean_dist_to_rdist{{name_suffix}}(const {{INPUT_DTYPE_t}} dist) except -1 nogil:
    return dist * dist


cdef inline float64_t euclidean_rdist_to_dist{{name_suffix}}(const {{INPUT_DTYPE_t}} dist) except -1 nogil:
    return sqrt(dist)


######################################################################
# DistanceMetric{{name_suffix}} base class
cdef class DistanceMetric{{name_suffix}}(DistanceMetric):
    # The following attributes are required for a few of the subclasses.
    # we must define them here so that cython's limited polymorphism will work.
    # Because we don't expect to instantiate a lot of these objects, the
    # extra memory overhead of this setup should not be an issue.
    cdef float64_t p
    cdef const float64_t[::1] vec
    cdef const float64_t[:, ::1] mat
    cdef intp_t size
    cdef object func
    cdef object kwargs

    cdef {{INPUT_DTYPE_t}} dist(
        self,
        const {{INPUT_DTYPE_t}}* x1,
        const {{INPUT_DTYPE_t}}* x2,
        intp_t size,
    ) except -1 nogil

    cdef {{INPUT_DTYPE_t}} rdist(
        self,
        const {{INPUT_DTYPE_t}}* x1,
        const {{INPUT_DTYPE_t}}* x2,
        intp_t size,
    ) except -1 nogil

    cdef {{INPUT_DTYPE_t}} dist_csr(
        self,
        const {{INPUT_DTYPE_t}}* x1_data,
        const int32_t* x1_indices,
        const {{INPUT_DTYPE_t}}* x2_data,
        const int32_t* x2_indices,
        const int32_t x1_start,
        const int32_t x1_end,
        const int32_t x2_start,
        const int32_t x2_end,
        const intp_t size,
    ) except -1 nogil

    cdef {{INPUT_DTYPE_t}} rdist_csr(
        self,
        const {{INPUT_DTYPE_t}}* x1_data,
        const int32_t* x1_indices,
        const {{INPUT_DTYPE_t}}* x2_data,
        const int32_t* x2_indices,
        const int32_t x1_start,
        const int32_t x1_end,
        const int32_t x2_start,
        const int32_t x2_end,
        const intp_t size,
    ) except -1 nogil

    cdef int pdist(
        self,
        const {{INPUT_DTYPE_t}}[:, ::1] X,
        {{INPUT_DTYPE_t}}[:, ::1] D,
    ) except -1

    cdef int cdist(
        self,
        const {{INPUT_DTYPE_t}}[:, ::1] X,
        const {{INPUT_DTYPE_t}}[:, ::1] Y,
        {{INPUT_DTYPE_t}}[:, ::1] D,
    ) except -1

    cdef int pdist_csr(
        self,
        const {{INPUT_DTYPE_t}}* x1_data,
        const int32_t[::1] x1_indices,
        const int32_t[::1] x1_indptr,
        const intp_t size,
        {{INPUT_DTYPE_t}}[:, ::1] D,
    ) except -1 nogil

    cdef int cdist_csr(
        self,
        const {{INPUT_DTYPE_t}}* x1_data,
        const int32_t[::1] x1_indices,
        const int32_t[::1] x1_indptr,
        const {{INPUT_DTYPE_t}}* x2_data,
        const int32_t[::1] x2_indices,
        const int32_t[::1] x2_indptr,
        const intp_t size,
        {{INPUT_DTYPE_t}}[:, ::1] D,
    ) except -1 nogil

    cdef {{INPUT_DTYPE_t}} _rdist_to_dist(self, {{INPUT_DTYPE_t}} rdist) except -1 nogil

    cdef {{INPUT_DTYPE_t}} _dist_to_rdist(self, {{INPUT_DTYPE_t}} dist) except -1 nogil

{{endfor}}