""" manage PyTables query interface via Expressions """ from __future__ import annotations import ast from functools import partial from typing import Any import numpy as np from pandas._libs.tslibs import ( Timedelta, Timestamp, ) from pandas._typing import npt from pandas.errors import UndefinedVariableError from pandas.core.dtypes.common import is_list_like import pandas.core.common as com from pandas.core.computation import ( expr, ops, scope as _scope, ) from pandas.core.computation.common import ensure_decoded from pandas.core.computation.expr import BaseExprVisitor from pandas.core.computation.ops import is_term from pandas.core.construction import extract_array from pandas.core.indexes.base import Index from pandas.io.formats.printing import ( pprint_thing, pprint_thing_encoded, ) class PyTablesScope(_scope.Scope): __slots__ = ("queryables",) queryables: dict[str, Any] def __init__( self, level: int, global_dict=None, local_dict=None, queryables: dict[str, Any] | None = None, ) -> None: super().__init__(level + 1, global_dict=global_dict, local_dict=local_dict) self.queryables = queryables or {} class Term(ops.Term): env: PyTablesScope def __new__(cls, name, env, side=None, encoding=None): if isinstance(name, str): klass = cls else: klass = Constant return object.__new__(klass) def __init__(self, name, env: PyTablesScope, side=None, encoding=None) -> None: super().__init__(name, env, side=side, encoding=encoding) def _resolve_name(self): # must be a queryables if self.side == "left": # Note: The behavior of __new__ ensures that self.name is a str here if self.name not in self.env.queryables: raise NameError(f"name {repr(self.name)} is not defined") return self.name # resolve the rhs (and allow it to be None) try: return self.env.resolve(self.name, is_local=False) except UndefinedVariableError: return self.name # read-only property overwriting read/write property @property # type: ignore[misc] def value(self): return self._value class Constant(Term): def __init__(self, value, env: PyTablesScope, side=None, encoding=None) -> None: assert isinstance(env, PyTablesScope), type(env) super().__init__(value, env, side=side, encoding=encoding) def _resolve_name(self): return self._name class BinOp(ops.BinOp): _max_selectors = 31 op: str queryables: dict[str, Any] condition: str | None def __init__(self, op: str, lhs, rhs, queryables: dict[str, Any], encoding) -> None: super().__init__(op, lhs, rhs) self.queryables = queryables self.encoding = encoding self.condition = None def _disallow_scalar_only_bool_ops(self) -> None: pass def prune(self, klass): def pr(left, right): """create and return a new specialized BinOp from myself""" if left is None: return right elif right is None: return left k = klass if isinstance(left, ConditionBinOp): if isinstance(right, ConditionBinOp): k = JointConditionBinOp elif isinstance(left, k): return left elif isinstance(right, k): return right elif isinstance(left, FilterBinOp): if isinstance(right, FilterBinOp): k = JointFilterBinOp elif isinstance(left, k): return left elif isinstance(right, k): return right return k( self.op, left, right, queryables=self.queryables, encoding=self.encoding ).evaluate() left, right = self.lhs, self.rhs if is_term(left) and is_term(right): res = pr(left.value, right.value) elif not is_term(left) and is_term(right): res = pr(left.prune(klass), right.value) elif is_term(left) and not is_term(right): res = pr(left.value, right.prune(klass)) elif not (is_term(left) or is_term(right)): res = pr(left.prune(klass), right.prune(klass)) return res def conform(self, rhs): """inplace conform rhs""" if not is_list_like(rhs): rhs = [rhs] if isinstance(rhs, np.ndarray): rhs = rhs.ravel() return rhs @property def is_valid(self) -> bool: """return True if this is a valid field""" return self.lhs in self.queryables @property def is_in_table(self) -> bool: """ return True if this is a valid column name for generation (e.g. an actual column in the table) """ return self.queryables.get(self.lhs) is not None @property def kind(self): """the kind of my field""" return getattr(self.queryables.get(self.lhs), "kind", None) @property def meta(self): """the meta of my field""" return getattr(self.queryables.get(self.lhs), "meta", None) @property def metadata(self): """the metadata of my field""" return getattr(self.queryables.get(self.lhs), "metadata", None) def generate(self, v) -> str: """create and return the op string for this TermValue""" val = v.tostring(self.encoding) return f"({self.lhs} {self.op} {val})" def convert_value(self, v) -> TermValue: """ convert the expression that is in the term to something that is accepted by pytables """ def stringify(value): if self.encoding is not None: return pprint_thing_encoded(value, encoding=self.encoding) return pprint_thing(value) kind = ensure_decoded(self.kind) meta = ensure_decoded(self.meta) if kind in ("datetime64", "datetime"): if isinstance(v, (int, float)): v = stringify(v) v = ensure_decoded(v) v = Timestamp(v).as_unit("ns") if v.tz is not None: v = v.tz_convert("UTC") return TermValue(v, v._value, kind) elif kind in ("timedelta64", "timedelta"): if isinstance(v, str): v = Timedelta(v) else: v = Timedelta(v, unit="s") v = v.as_unit("ns")._value return TermValue(int(v), v, kind) elif meta == "category": metadata = extract_array(self.metadata, extract_numpy=True) result: npt.NDArray[np.intp] | np.intp | int if v not in metadata: result = -1 else: result = metadata.searchsorted(v, side="left") return TermValue(result, result, "integer") elif kind == "integer": v = int(float(v)) return TermValue(v, v, kind) elif kind == "float": v = float(v) return TermValue(v, v, kind) elif kind == "bool": if isinstance(v, str): v = v.strip().lower() not in [ "false", "f", "no", "n", "none", "0", "[]", "{}", "", ] else: v = bool(v) return TermValue(v, v, kind) elif isinstance(v, str): # string quoting return TermValue(v, stringify(v), "string") else: raise TypeError(f"Cannot compare {v} of type {type(v)} to {kind} column") def convert_values(self) -> None: pass class FilterBinOp(BinOp): filter: tuple[Any, Any, Index] | None = None def __repr__(self) -> str: if self.filter is None: return "Filter: Not Initialized" return pprint_thing(f"[Filter : [{self.filter[0]}] -> [{self.filter[1]}]") def invert(self): """invert the filter""" if self.filter is not None: self.filter = ( self.filter[0], self.generate_filter_op(invert=True), self.filter[2], ) return self def format(self): """return the actual filter format""" return [self.filter] def evaluate(self): if not self.is_valid: raise ValueError(f"query term is not valid [{self}]") rhs = self.conform(self.rhs) values = list(rhs) if self.is_in_table: # if too many values to create the expression, use a filter instead if self.op in ["==", "!="] and len(values) > self._max_selectors: filter_op = self.generate_filter_op() self.filter = (self.lhs, filter_op, Index(values)) return self return None # equality conditions if self.op in ["==", "!="]: filter_op = self.generate_filter_op() self.filter = (self.lhs, filter_op, Index(values)) else: raise TypeError( f"passing a filterable condition to a non-table indexer [{self}]" ) return self def generate_filter_op(self, invert: bool = False): if (self.op == "!=" and not invert) or (self.op == "==" and invert): return lambda axis, vals: ~axis.isin(vals) else: return lambda axis, vals: axis.isin(vals) class JointFilterBinOp(FilterBinOp): def format(self): raise NotImplementedError("unable to collapse Joint Filters") def evaluate(self): return self class ConditionBinOp(BinOp): def __repr__(self) -> str: return pprint_thing(f"[Condition : [{self.condition}]]") def invert(self): """invert the condition""" # if self.condition is not None: # self.condition = "~(%s)" % self.condition # return self raise NotImplementedError( "cannot use an invert condition when passing to numexpr" ) def format(self): """return the actual ne format""" return self.condition def evaluate(self): if not self.is_valid: raise ValueError(f"query term is not valid [{self}]") # convert values if we are in the table if not self.is_in_table: return None rhs = self.conform(self.rhs) values = [self.convert_value(v) for v in rhs] # equality conditions if self.op in ["==", "!="]: # too many values to create the expression? if len(values) <= self._max_selectors: vs = [self.generate(v) for v in values] self.condition = f"({' | '.join(vs)})" # use a filter after reading else: return None else: self.condition = self.generate(values[0]) return self class JointConditionBinOp(ConditionBinOp): def evaluate(self): self.condition = f"({self.lhs.condition} {self.op} {self.rhs.condition})" return self class UnaryOp(ops.UnaryOp): def prune(self, klass): if self.op != "~": raise NotImplementedError("UnaryOp only support invert type ops") operand = self.operand operand = operand.prune(klass) if operand is not None and ( issubclass(klass, ConditionBinOp) and operand.condition is not None or not issubclass(klass, ConditionBinOp) and issubclass(klass, FilterBinOp) and operand.filter is not None ): return operand.invert() return None class PyTablesExprVisitor(BaseExprVisitor): const_type = Constant term_type = Term def __init__(self, env, engine, parser, **kwargs) -> None: super().__init__(env, engine, parser) for bin_op in self.binary_ops: bin_node = self.binary_op_nodes_map[bin_op] setattr( self, f"visit_{bin_node}", lambda node, bin_op=bin_op: partial(BinOp, bin_op, **kwargs), ) def visit_UnaryOp(self, node, **kwargs): if isinstance(node.op, (ast.Not, ast.Invert)): return UnaryOp("~", self.visit(node.operand)) elif isinstance(node.op, ast.USub): return self.const_type(-self.visit(node.operand).value, self.env) elif isinstance(node.op, ast.UAdd): raise NotImplementedError("Unary addition not supported") def visit_Index(self, node, **kwargs): return self.visit(node.value).value def visit_Assign(self, node, **kwargs): cmpr = ast.Compare( ops=[ast.Eq()], left=node.targets[0], comparators=[node.value] ) return self.visit(cmpr) def visit_Subscript(self, node, **kwargs): # only allow simple subscripts value = self.visit(node.value) slobj = self.visit(node.slice) try: value = value.value except AttributeError: pass if isinstance(slobj, Term): # In py39 np.ndarray lookups with Term containing int raise slobj = slobj.value try: return self.const_type(value[slobj], self.env) except TypeError as err: raise ValueError( f"cannot subscript {repr(value)} with {repr(slobj)}" ) from err def visit_Attribute(self, node, **kwargs): attr = node.attr value = node.value ctx = type(node.ctx) if ctx == ast.Load: # resolve the value resolved = self.visit(value) # try to get the value to see if we are another expression try: resolved = resolved.value except AttributeError: pass try: return self.term_type(getattr(resolved, attr), self.env) except AttributeError: # something like datetime.datetime where scope is overridden if isinstance(value, ast.Name) and value.id == attr: return resolved raise ValueError(f"Invalid Attribute context {ctx.__name__}") def translate_In(self, op): return ast.Eq() if isinstance(op, ast.In) else op def _rewrite_membership_op(self, node, left, right): return self.visit(node.op), node.op, left, right def _validate_where(w): """ Validate that the where statement is of the right type. The type may either be String, Expr, or list-like of Exprs. Parameters ---------- w : String term expression, Expr, or list-like of Exprs. Returns ------- where : The original where clause if the check was successful. Raises ------ TypeError : An invalid data type was passed in for w (e.g. dict). """ if not (isinstance(w, (PyTablesExpr, str)) or is_list_like(w)): raise TypeError( "where must be passed as a string, PyTablesExpr, " "or list-like of PyTablesExpr" ) return w class PyTablesExpr(expr.Expr): """ Hold a pytables-like expression, comprised of possibly multiple 'terms'. Parameters ---------- where : string term expression, PyTablesExpr, or list-like of PyTablesExprs queryables : a "kinds" map (dict of column name -> kind), or None if column is non-indexable encoding : an encoding that will encode the query terms Returns ------- a PyTablesExpr object Examples -------- 'index>=date' "columns=['A', 'D']" 'columns=A' 'columns==A' "~(columns=['A','B'])" 'index>df.index[3] & string="bar"' '(index>df.index[3] & index<=df.index[6]) | string="bar"' "ts>=Timestamp('2012-02-01')" "major_axis>=20130101" """ _visitor: PyTablesExprVisitor | None env: PyTablesScope expr: str def __init__( self, where, queryables: dict[str, Any] | None = None, encoding=None, scope_level: int = 0, ) -> None: where = _validate_where(where) self.encoding = encoding self.condition = None self.filter = None self.terms = None self._visitor = None # capture the environment if needed local_dict: _scope.DeepChainMap[Any, Any] | None = None if isinstance(where, PyTablesExpr): local_dict = where.env.scope _where = where.expr elif is_list_like(where): where = list(where) for idx, w in enumerate(where): if isinstance(w, PyTablesExpr): local_dict = w.env.scope else: w = _validate_where(w) where[idx] = w _where = " & ".join([f"({w})" for w in com.flatten(where)]) else: # _validate_where ensures we otherwise have a string _where = where self.expr = _where self.env = PyTablesScope(scope_level + 1, local_dict=local_dict) if queryables is not None and isinstance(self.expr, str): self.env.queryables.update(queryables) self._visitor = PyTablesExprVisitor( self.env, queryables=queryables, parser="pytables", engine="pytables", encoding=encoding, ) self.terms = self.parse() def __repr__(self) -> str: if self.terms is not None: return pprint_thing(self.terms) return pprint_thing(self.expr) def evaluate(self): """create and return the numexpr condition and filter""" try: self.condition = self.terms.prune(ConditionBinOp) except AttributeError as err: raise ValueError( f"cannot process expression [{self.expr}], [{self}] " "is not a valid condition" ) from err try: self.filter = self.terms.prune(FilterBinOp) except AttributeError as err: raise ValueError( f"cannot process expression [{self.expr}], [{self}] " "is not a valid filter" ) from err return self.condition, self.filter class TermValue: """hold a term value the we use to construct a condition/filter""" def __init__(self, value, converted, kind: str) -> None: assert isinstance(kind, str), kind self.value = value self.converted = converted self.kind = kind def tostring(self, encoding) -> str: """quote the string if not encoded else encode and return""" if self.kind == "string": if encoding is not None: return str(self.converted) return f'"{self.converted}"' elif self.kind == "float": # python 2 str(float) is not always # round-trippable so use repr() return repr(self.converted) return str(self.converted) def maybe_expression(s) -> bool: """loose checking if s is a pytables-acceptable expression""" if not isinstance(s, str): return False operations = PyTablesExprVisitor.binary_ops + PyTablesExprVisitor.unary_ops + ("=",) # make sure we have an op at least return any(op in s for op in operations)