# Copyright 2021 The JAX Authors. # # Licensed under the Apache License, Version 2.0 (the "License"); # you may not use this file except in compliance with the License. # You may obtain a copy of the License at # # https://www.apache.org/licenses/LICENSE-2.0 # # Unless required by applicable law or agreed to in writing, software # distributed under the License is distributed on an "AS IS" BASIS, # WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. # See the License for the specific language governing permissions and # limitations under the License import scipy.stats as osp_stats from jax import lax import jax.numpy as jnp from jax._src.lax.lax import _const as _lax_const from jax._src.numpy.util import _wraps, promote_args_inexact from jax._src.scipy.special import betaln from jax._src.typing import Array, ArrayLike @_wraps(osp_stats.betabinom.logpmf, update_doc=False) def logpmf(k: ArrayLike, n: ArrayLike, a: ArrayLike, b: ArrayLike, loc: ArrayLike = 0) -> Array: """JAX implementation of scipy.stats.betabinom.logpmf.""" k, n, a, b, loc = promote_args_inexact("betabinom.logpmf", k, n, a, b, loc) y = lax.sub(lax.floor(k), loc) one = _lax_const(y, 1) zero = _lax_const(y, 0) combiln = lax.neg(lax.add(lax.log1p(n), betaln(lax.add(lax.sub(n,y), one), lax.add(y,one)))) beta_lns = lax.sub(betaln(lax.add(y,a), lax.add(lax.sub(n,y),b)), betaln(a,b)) log_probs = lax.add(combiln, beta_lns) y_cond = jnp.logical_or(lax.lt(y, lax.neg(loc)), lax.gt(y, lax.sub(n, loc))) log_probs = jnp.where(y_cond, -jnp.inf, log_probs) n_a_b_cond = jnp.logical_or(jnp.logical_or(lax.lt(n, one), lax.lt(a, zero)), lax.lt(b, zero)) return jnp.where(n_a_b_cond, jnp.nan, log_probs) @_wraps(osp_stats.betabinom.pmf, update_doc=False) def pmf(k: ArrayLike, n: ArrayLike, a: ArrayLike, b: ArrayLike, loc: ArrayLike = 0) -> Array: """JAX implementation of scipy.stats.betabinom.pmf.""" return lax.exp(logpmf(k, n, a, b, loc))