# This file is part of h5py, a Python interface to the HDF5 library. # # http://www.h5py.org # # Copyright 2008-2013 Andrew Collette and contributors # # License: Standard 3-clause BSD; see "license.txt" for full license terms # and contributor agreement. import tempfile import shutil import os import numpy as np from h5py import File, special_dtype from h5py._hl.files import direct_vfd from .common import ut, TestCase from .common import ut, TestCase, UNICODE_FILENAMES, closed_tempfile class TestFileID(TestCase): def test_descriptor_core(self): with File('TestFileID.test_descriptor_core', driver='core', backing_store=False, mode='x') as f: assert isinstance(f.id.get_vfd_handle(), int) def test_descriptor_sec2(self): dn_tmp = tempfile.mkdtemp('h5py.lowtest.test_h5f.TestFileID.test_descriptor_sec2') fn_h5 = os.path.join(dn_tmp, 'test.h5') try: with File(fn_h5, driver='sec2', mode='x') as f: descriptor = f.id.get_vfd_handle() self.assertNotEqual(descriptor, 0) os.fsync(descriptor) finally: shutil.rmtree(dn_tmp) @ut.skipUnless(direct_vfd, "DIRECT driver is supported on Linux if hdf5 is " "built with the appriorate flags.") def test_descriptor_direct(self): dn_tmp = tempfile.mkdtemp('h5py.lowtest.test_h5f.TestFileID.test_descriptor_direct') fn_h5 = os.path.join(dn_tmp, 'test.h5') try: with File(fn_h5, driver='direct', mode='x') as f: descriptor = f.id.get_vfd_handle() self.assertNotEqual(descriptor, 0) os.fsync(descriptor) finally: shutil.rmtree(dn_tmp) class TestCacheConfig(TestCase): def test_simple_gets(self): dn_tmp = tempfile.mkdtemp('h5py.lowtest.test_h5f.TestFileID.TestCacheConfig.test_simple_gets') fn_h5 = os.path.join(dn_tmp, 'test.h5') try: with File(fn_h5, mode='x') as f: hit_rate = f._id.get_mdc_hit_rate() mdc_size = f._id.get_mdc_size() finally: shutil.rmtree(dn_tmp) def test_hitrate_reset(self): dn_tmp = tempfile.mkdtemp('h5py.lowtest.test_h5f.TestFileID.TestCacheConfig.test_hitrate_reset') fn_h5 = os.path.join(dn_tmp, 'test.h5') try: with File(fn_h5, mode='x') as f: hit_rate = f._id.get_mdc_hit_rate() f._id.reset_mdc_hit_rate_stats() hit_rate = f._id.get_mdc_hit_rate() assert hit_rate == 0 finally: shutil.rmtree(dn_tmp) def test_mdc_config_get(self): dn_tmp = tempfile.mkdtemp('h5py.lowtest.test_h5f.TestFileID.TestCacheConfig.test_mdc_config_get') fn_h5 = os.path.join(dn_tmp, 'test.h5') try: with File(fn_h5, mode='x') as f: conf = f._id.get_mdc_config() f._id.set_mdc_config(conf) finally: shutil.rmtree(dn_tmp) class TestVlenData(TestCase): def test_vlen_strings(self): # Create file with dataset containing vlen arrays of vlen strings dn_tmp = tempfile.mkdtemp('h5py.lowtest.test_h5f.TestVlenStrings.test_vlen_strings') fn_h5 = os.path.join(dn_tmp, 'test.h5') try: with File(fn_h5, mode='w') as h: vlen_str = special_dtype(vlen=str) vlen_vlen_str = special_dtype(vlen=vlen_str) ds = h.create_dataset('/com', (2,), dtype=vlen_vlen_str) ds[0] = (np.array(["a", "b", "c"], dtype=vlen_vlen_str)) ds[1] = (np.array(["d", "e", "f","g"], dtype=vlen_vlen_str)) with File(fn_h5, "r") as h: ds = h["com"] assert ds[0].tolist() == [b'a', b'b', b'c'] assert ds[1].tolist() == [b'd', b'e', b'f', b'g'] finally: shutil.rmtree(dn_tmp)