# Tests that require installed backends go into # sympy/test_external/test_autowrap import os import tempfile import shutil from io import StringIO from sympy.core import symbols, Eq from sympy.utilities.autowrap import (autowrap, binary_function, CythonCodeWrapper, UfuncifyCodeWrapper, CodeWrapper) from sympy.utilities.codegen import ( CCodeGen, C99CodeGen, CodeGenArgumentListError, make_routine ) from sympy.testing.pytest import raises from sympy.testing.tmpfiles import TmpFileManager def get_string(dump_fn, routines, prefix="file", **kwargs): """Wrapper for dump_fn. dump_fn writes its results to a stream object and this wrapper returns the contents of that stream as a string. This auxiliary function is used by many tests below. The header and the empty lines are not generator to facilitate the testing of the output. """ output = StringIO() dump_fn(routines, output, prefix, **kwargs) source = output.getvalue() output.close() return source def test_cython_wrapper_scalar_function(): x, y, z = symbols('x,y,z') expr = (x + y)*z routine = make_routine("test", expr) code_gen = CythonCodeWrapper(CCodeGen()) source = get_string(code_gen.dump_pyx, [routine]) expected = ( "cdef extern from 'file.h':\n" " double test(double x, double y, double z)\n" "\n" "def test_c(double x, double y, double z):\n" "\n" " return test(x, y, z)") assert source == expected def test_cython_wrapper_outarg(): from sympy.core.relational import Equality x, y, z = symbols('x,y,z') code_gen = CythonCodeWrapper(C99CodeGen()) routine = make_routine("test", Equality(z, x + y)) source = get_string(code_gen.dump_pyx, [routine]) expected = ( "cdef extern from 'file.h':\n" " void test(double x, double y, double *z)\n" "\n" "def test_c(double x, double y):\n" "\n" " cdef double z = 0\n" " test(x, y, &z)\n" " return z") assert source == expected def test_cython_wrapper_inoutarg(): from sympy.core.relational import Equality x, y, z = symbols('x,y,z') code_gen = CythonCodeWrapper(C99CodeGen()) routine = make_routine("test", Equality(z, x + y + z)) source = get_string(code_gen.dump_pyx, [routine]) expected = ( "cdef extern from 'file.h':\n" " void test(double x, double y, double *z)\n" "\n" "def test_c(double x, double y, double z):\n" "\n" " test(x, y, &z)\n" " return z") assert source == expected def test_cython_wrapper_compile_flags(): from sympy.core.relational import Equality x, y, z = symbols('x,y,z') routine = make_routine("test", Equality(z, x + y)) code_gen = CythonCodeWrapper(CCodeGen()) expected = """\ from setuptools import setup from setuptools import Extension from Cython.Build import cythonize cy_opts = {'compiler_directives': {'language_level': '3'}} ext_mods = [Extension( 'wrapper_module_%(num)s', ['wrapper_module_%(num)s.pyx', 'wrapped_code_%(num)s.c'], include_dirs=[], library_dirs=[], libraries=[], extra_compile_args=['-std=c99'], extra_link_args=[] )] setup(ext_modules=cythonize(ext_mods, **cy_opts)) """ % {'num': CodeWrapper._module_counter} temp_dir = tempfile.mkdtemp() TmpFileManager.tmp_folder(temp_dir) setup_file_path = os.path.join(temp_dir, 'setup.py') code_gen._prepare_files(routine, build_dir=temp_dir) with open(setup_file_path) as f: setup_text = f.read() assert setup_text == expected code_gen = CythonCodeWrapper(CCodeGen(), include_dirs=['/usr/local/include', '/opt/booger/include'], library_dirs=['/user/local/lib'], libraries=['thelib', 'nilib'], extra_compile_args=['-slow-math'], extra_link_args=['-lswamp', '-ltrident'], cythonize_options={'compiler_directives': {'boundscheck': False}} ) expected = """\ from setuptools import setup from setuptools import Extension from Cython.Build import cythonize cy_opts = {'compiler_directives': {'boundscheck': False}} ext_mods = [Extension( 'wrapper_module_%(num)s', ['wrapper_module_%(num)s.pyx', 'wrapped_code_%(num)s.c'], include_dirs=['/usr/local/include', '/opt/booger/include'], library_dirs=['/user/local/lib'], libraries=['thelib', 'nilib'], extra_compile_args=['-slow-math', '-std=c99'], extra_link_args=['-lswamp', '-ltrident'] )] setup(ext_modules=cythonize(ext_mods, **cy_opts)) """ % {'num': CodeWrapper._module_counter} code_gen._prepare_files(routine, build_dir=temp_dir) with open(setup_file_path) as f: setup_text = f.read() assert setup_text == expected expected = """\ from setuptools import setup from setuptools import Extension from Cython.Build import cythonize cy_opts = {'compiler_directives': {'boundscheck': False}} import numpy as np ext_mods = [Extension( 'wrapper_module_%(num)s', ['wrapper_module_%(num)s.pyx', 'wrapped_code_%(num)s.c'], include_dirs=['/usr/local/include', '/opt/booger/include', np.get_include()], library_dirs=['/user/local/lib'], libraries=['thelib', 'nilib'], extra_compile_args=['-slow-math', '-std=c99'], extra_link_args=['-lswamp', '-ltrident'] )] setup(ext_modules=cythonize(ext_mods, **cy_opts)) """ % {'num': CodeWrapper._module_counter} code_gen._need_numpy = True code_gen._prepare_files(routine, build_dir=temp_dir) with open(setup_file_path) as f: setup_text = f.read() assert setup_text == expected TmpFileManager.cleanup() def test_cython_wrapper_unique_dummyvars(): from sympy.core.relational import Equality from sympy.core.symbol import Dummy x, y, z = Dummy('x'), Dummy('y'), Dummy('z') x_id, y_id, z_id = [str(d.dummy_index) for d in [x, y, z]] expr = Equality(z, x + y) routine = make_routine("test", expr) code_gen = CythonCodeWrapper(CCodeGen()) source = get_string(code_gen.dump_pyx, [routine]) expected_template = ( "cdef extern from 'file.h':\n" " void test(double x_{x_id}, double y_{y_id}, double *z_{z_id})\n" "\n" "def test_c(double x_{x_id}, double y_{y_id}):\n" "\n" " cdef double z_{z_id} = 0\n" " test(x_{x_id}, y_{y_id}, &z_{z_id})\n" " return z_{z_id}") expected = expected_template.format(x_id=x_id, y_id=y_id, z_id=z_id) assert source == expected def test_autowrap_dummy(): x, y, z = symbols('x y z') # Uses DummyWrapper to test that codegen works as expected f = autowrap(x + y, backend='dummy') assert f() == str(x + y) assert f.args == "x, y" assert f.returns == "nameless" f = autowrap(Eq(z, x + y), backend='dummy') assert f() == str(x + y) assert f.args == "x, y" assert f.returns == "z" f = autowrap(Eq(z, x + y + z), backend='dummy') assert f() == str(x + y + z) assert f.args == "x, y, z" assert f.returns == "z" def test_autowrap_args(): x, y, z = symbols('x y z') raises(CodeGenArgumentListError, lambda: autowrap(Eq(z, x + y), backend='dummy', args=[x])) f = autowrap(Eq(z, x + y), backend='dummy', args=[y, x]) assert f() == str(x + y) assert f.args == "y, x" assert f.returns == "z" raises(CodeGenArgumentListError, lambda: autowrap(Eq(z, x + y + z), backend='dummy', args=[x, y])) f = autowrap(Eq(z, x + y + z), backend='dummy', args=[y, x, z]) assert f() == str(x + y + z) assert f.args == "y, x, z" assert f.returns == "z" f = autowrap(Eq(z, x + y + z), backend='dummy', args=(y, x, z)) assert f() == str(x + y + z) assert f.args == "y, x, z" assert f.returns == "z" def test_autowrap_store_files(): x, y = symbols('x y') tmp = tempfile.mkdtemp() TmpFileManager.tmp_folder(tmp) f = autowrap(x + y, backend='dummy', tempdir=tmp) assert f() == str(x + y) assert os.access(tmp, os.F_OK) TmpFileManager.cleanup() def test_autowrap_store_files_issue_gh12939(): x, y = symbols('x y') tmp = './tmp' saved_cwd = os.getcwd() temp_cwd = tempfile.mkdtemp() try: os.chdir(temp_cwd) f = autowrap(x + y, backend='dummy', tempdir=tmp) assert f() == str(x + y) assert os.access(tmp, os.F_OK) finally: os.chdir(saved_cwd) shutil.rmtree(temp_cwd) def test_binary_function(): x, y = symbols('x y') f = binary_function('f', x + y, backend='dummy') assert f._imp_() == str(x + y) def test_ufuncify_source(): x, y, z = symbols('x,y,z') code_wrapper = UfuncifyCodeWrapper(C99CodeGen("ufuncify")) routine = make_routine("test", x + y + z) source = get_string(code_wrapper.dump_c, [routine]) expected = """\ #include "Python.h" #include "math.h" #include "numpy/ndarraytypes.h" #include "numpy/ufuncobject.h" #include "numpy/halffloat.h" #include "file.h" static PyMethodDef wrapper_module_%(num)sMethods[] = { {NULL, NULL, 0, NULL} }; static void test_ufunc(char **args, npy_intp *dimensions, npy_intp* steps, void* data) { npy_intp i; npy_intp n = dimensions[0]; char *in0 = args[0]; char *in1 = args[1]; char *in2 = args[2]; char *out0 = args[3]; npy_intp in0_step = steps[0]; npy_intp in1_step = steps[1]; npy_intp in2_step = steps[2]; npy_intp out0_step = steps[3]; for (i = 0; i < n; i++) { *((double *)out0) = test(*(double *)in0, *(double *)in1, *(double *)in2); in0 += in0_step; in1 += in1_step; in2 += in2_step; out0 += out0_step; } } PyUFuncGenericFunction test_funcs[1] = {&test_ufunc}; static char test_types[4] = {NPY_DOUBLE, NPY_DOUBLE, NPY_DOUBLE, NPY_DOUBLE}; static void *test_data[1] = {NULL}; #if PY_VERSION_HEX >= 0x03000000 static struct PyModuleDef moduledef = { PyModuleDef_HEAD_INIT, "wrapper_module_%(num)s", NULL, -1, wrapper_module_%(num)sMethods, NULL, NULL, NULL, NULL }; PyMODINIT_FUNC PyInit_wrapper_module_%(num)s(void) { PyObject *m, *d; PyObject *ufunc0; m = PyModule_Create(&moduledef); if (!m) { return NULL; } import_array(); import_umath(); d = PyModule_GetDict(m); ufunc0 = PyUFunc_FromFuncAndData(test_funcs, test_data, test_types, 1, 3, 1, PyUFunc_None, "wrapper_module_%(num)s", "Created in SymPy with Ufuncify", 0); PyDict_SetItemString(d, "test", ufunc0); Py_DECREF(ufunc0); return m; } #else PyMODINIT_FUNC initwrapper_module_%(num)s(void) { PyObject *m, *d; PyObject *ufunc0; m = Py_InitModule("wrapper_module_%(num)s", wrapper_module_%(num)sMethods); if (m == NULL) { return; } import_array(); import_umath(); d = PyModule_GetDict(m); ufunc0 = PyUFunc_FromFuncAndData(test_funcs, test_data, test_types, 1, 3, 1, PyUFunc_None, "wrapper_module_%(num)s", "Created in SymPy with Ufuncify", 0); PyDict_SetItemString(d, "test", ufunc0); Py_DECREF(ufunc0); } #endif""" % {'num': CodeWrapper._module_counter} assert source == expected def test_ufuncify_source_multioutput(): x, y, z = symbols('x,y,z') var_symbols = (x, y, z) expr = x + y**3 + 10*z**2 code_wrapper = UfuncifyCodeWrapper(C99CodeGen("ufuncify")) routines = [make_routine("func{}".format(i), expr.diff(var_symbols[i]), var_symbols) for i in range(len(var_symbols))] source = get_string(code_wrapper.dump_c, routines, funcname='multitest') expected = """\ #include "Python.h" #include "math.h" #include "numpy/ndarraytypes.h" #include "numpy/ufuncobject.h" #include "numpy/halffloat.h" #include "file.h" static PyMethodDef wrapper_module_%(num)sMethods[] = { {NULL, NULL, 0, NULL} }; static void multitest_ufunc(char **args, npy_intp *dimensions, npy_intp* steps, void* data) { npy_intp i; npy_intp n = dimensions[0]; char *in0 = args[0]; char *in1 = args[1]; char *in2 = args[2]; char *out0 = args[3]; char *out1 = args[4]; char *out2 = args[5]; npy_intp in0_step = steps[0]; npy_intp in1_step = steps[1]; npy_intp in2_step = steps[2]; npy_intp out0_step = steps[3]; npy_intp out1_step = steps[4]; npy_intp out2_step = steps[5]; for (i = 0; i < n; i++) { *((double *)out0) = func0(*(double *)in0, *(double *)in1, *(double *)in2); *((double *)out1) = func1(*(double *)in0, *(double *)in1, *(double *)in2); *((double *)out2) = func2(*(double *)in0, *(double *)in1, *(double *)in2); in0 += in0_step; in1 += in1_step; in2 += in2_step; out0 += out0_step; out1 += out1_step; out2 += out2_step; } } PyUFuncGenericFunction multitest_funcs[1] = {&multitest_ufunc}; static char multitest_types[6] = {NPY_DOUBLE, NPY_DOUBLE, NPY_DOUBLE, NPY_DOUBLE, NPY_DOUBLE, NPY_DOUBLE}; static void *multitest_data[1] = {NULL}; #if PY_VERSION_HEX >= 0x03000000 static struct PyModuleDef moduledef = { PyModuleDef_HEAD_INIT, "wrapper_module_%(num)s", NULL, -1, wrapper_module_%(num)sMethods, NULL, NULL, NULL, NULL }; PyMODINIT_FUNC PyInit_wrapper_module_%(num)s(void) { PyObject *m, *d; PyObject *ufunc0; m = PyModule_Create(&moduledef); if (!m) { return NULL; } import_array(); import_umath(); d = PyModule_GetDict(m); ufunc0 = PyUFunc_FromFuncAndData(multitest_funcs, multitest_data, multitest_types, 1, 3, 3, PyUFunc_None, "wrapper_module_%(num)s", "Created in SymPy with Ufuncify", 0); PyDict_SetItemString(d, "multitest", ufunc0); Py_DECREF(ufunc0); return m; } #else PyMODINIT_FUNC initwrapper_module_%(num)s(void) { PyObject *m, *d; PyObject *ufunc0; m = Py_InitModule("wrapper_module_%(num)s", wrapper_module_%(num)sMethods); if (m == NULL) { return; } import_array(); import_umath(); d = PyModule_GetDict(m); ufunc0 = PyUFunc_FromFuncAndData(multitest_funcs, multitest_data, multitest_types, 1, 3, 3, PyUFunc_None, "wrapper_module_%(num)s", "Created in SymPy with Ufuncify", 0); PyDict_SetItemString(d, "multitest", ufunc0); Py_DECREF(ufunc0); } #endif""" % {'num': CodeWrapper._module_counter} assert source == expected