forked from tzietkiewicz/aitech-ium
Updated DVC remote config
This commit is contained in:
parent
67e14528bb
commit
78aef5d79e
224
IUM_10.DVC.ipynb
224
IUM_10.DVC.ipynb
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@ -519,7 +519,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 12,
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"execution_count": 1,
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"id": "aae59ec2",
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"metadata": {
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"slideshow": {
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@ -533,7 +533,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 2,
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"execution_count": 1,
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"id": "1e522a93",
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"metadata": {
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"slideshow": {
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@ -545,7 +545,7 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"/home/tomek/AITech/repo/aitech-ium-private/IUM_10/sample-ml-project\n"
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"/home/tomek/repos/aitech-ium/IUM_10/sample-ml-project\n"
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]
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}
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],
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@ -568,7 +568,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 17,
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"execution_count": 2,
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"id": "c13c525b",
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"metadata": {
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"slideshow": {
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@ -580,7 +580,7 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Initialized empty Git repository in /home/tomek/AITech/repo/aitech-ium-private/IUM_10/sample-ml-project/.git/\r\n"
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"Reinitialized existing Git repository in /home/tomek/repos/aitech-ium/IUM_10/sample-ml-project/.git/\r\n"
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]
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}
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],
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@ -602,7 +602,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 18,
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"execution_count": 75,
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"id": "44f28226",
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"metadata": {
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"slideshow": {
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@ -654,7 +654,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 19,
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"execution_count": 4,
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"id": "d1aefe16",
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"metadata": {
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"slideshow": {
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@ -674,12 +674,6 @@
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" (use \"git rm --cached <file>...\" to unstage)\r\n",
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"\t\u001b[32mnew file: .dvc/.gitignore\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/config\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/plots/confusion.json\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/plots/confusion_normalized.json\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/plots/default.json\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/plots/linear.json\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/plots/scatter.json\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvc/plots/smooth.json\u001b[m\r\n",
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"\t\u001b[32mnew file: .dvcignore\u001b[m\r\n",
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"\r\n"
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]
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@ -703,9 +697,10 @@
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},
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{
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"cell_type": "code",
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"execution_count": 5,
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"execution_count": 6,
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"id": "59780e99",
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"metadata": {
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"scrolled": true,
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"slideshow": {
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"slide_type": "slide"
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}
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@ -715,8 +710,11 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"On branch master\r\n",
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"nothing to commit, working tree clean\r\n"
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"[master (root-commit) d00d0ac] Initial commit\r\n",
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" 3 files changed, 6 insertions(+)\r\n",
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" create mode 100644 .dvc/.gitignore\r\n",
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" create mode 100644 .dvc/config\r\n",
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" create mode 100644 .dvcignore\r\n"
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]
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}
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],
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@ -726,7 +724,7 @@
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},
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{
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"cell_type": "markdown",
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"id": "dd8e529b",
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"id": "3d4ce1cb",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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@ -738,7 +736,18 @@
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" - wydajnością\n",
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" - przestrzenią w repozytorium\n",
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" - ograniczenia ze strony serwisu (np. [limit 100 MB na plik w Github](https://docs.github.com/en/repositories/working-with-files/managing-large-files/about-large-files-on-github))\n",
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" - Git posiada rozszerzenie [lfs(Large File Storage)](https://git-lfs.github.com/), które stanowi pewne rozwiązanie tego problemu. Same pliki przechowywane są na specjalnym zdalnym serwerze, w repozytorium przechowywane są jedynie odnośniki do tych plików i pewne metadane\n",
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" - Git posiada rozszerzenie [lfs(Large File Storage)](https://git-lfs.github.com/), które stanowi pewne rozwiązanie tego problemu. Same pliki przechowywane są na specjalnym zdalnym serwerze, w repozytorium przechowywane są jedynie odnośniki do tych plików i pewne metadane"
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]
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},
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{
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"cell_type": "markdown",
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"id": "dd8e529b",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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}
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},
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"source": [
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" - DVC proponuje podobne podejście, ale:\n",
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" - pliki mogą być przechowywane na niemal dowolnym serwerze, również lokalnie\n",
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" - brak limitu wielkości plików (w Git-LFS na Github [limit 2GB](https://docs.github.com/en/repositories/working-with-files/managing-large-files/about-git-large-file-storage))\n",
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@ -760,7 +769,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 19,
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"execution_count": 9,
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"id": "f05ece1b",
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"metadata": {
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"slideshow": {
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@ -772,9 +781,10 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Downloading iris.zip to /home/tomek/AITech/repo/aitech-ium-private/IUM_10/sample-ml-project\n",
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"Warning: Your Kaggle API key is readable by other users on this system! To fix this, you can run 'chmod 600 /home/tomek/.kaggle/kaggle.json'\n",
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"Downloading iris.zip to /home/tomek/repos/aitech-ium/IUM_10/sample-ml-project\n",
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" 0%| | 0.00/3.60k [00:00<?, ?B/s]\n",
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"100%|██████████████████████████████████████| 3.60k/3.60k [00:00<00:00, 2.63MB/s]\n",
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"100%|██████████████████████████████████████| 3.60k/3.60k [00:00<00:00, 1.66MB/s]\n",
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"Archive: iris.zip\n",
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" inflating: Iris.csv \n",
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" inflating: database.sqlite \n"
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@ -803,7 +813,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 14,
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"execution_count": 10,
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"id": "74d182c7",
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"metadata": {
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"slideshow": {
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@ -815,14 +825,30 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"\u001b[2K\u001b[32m⠧\u001b[0m Checking graph \u001b[32m⠋\u001b[0m Checking graph\n",
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"Adding... \n",
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"!\u001b[A\n",
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" 0%| |.E8dZEGBYoRayYsJLdesNS4.tmp 0.00/5.11k [00:00<?, ?it/s]\u001b[A\n",
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"100% Add|██████████████████████████████████████████████|1/1 [00:04, 4.71s/file]\u001b[A\n",
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" 0% Checking cache in '/home/tomek/repos/aitech-ium/IUM_10/sample-ml-project/.d\u001b[A\n",
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" \u001b[A\n",
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"!\u001b[A\n",
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" 0%| |Transferring 0/1 [00:00<?, ?file/s]\u001b[A\n",
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" \u001b[A\n",
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"!\u001b[A\n",
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" 0%| |.oAL9GSGErYepJSZTnvkTL8.tmp 0.00/? [00:00<?, ?B/s]\u001b[A\n",
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" 0%| |.oAL9GSGErYepJSZTnvkTL8.tmp 0.00/4.00 [00:00<?, ?B/s]\u001b[A\n",
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" \u001b[A\n",
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"!\u001b[A\n",
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" 0%| |7820ef0af287ff346c5cabfb4c612c 0.00/? [00:00<?, ?B/s]\u001b[A\n",
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" 0%| |7820ef0af287ff346c5cabfb4c612c 0.00/4.99k [00:00<?, ?B/s]\u001b[A\n",
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"100% Adding...|████████████████████████████████████████|1/1 [00:00, 2.59file/s]\u001b[A\n",
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"\n",
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"To track the changes with git, run:\n",
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"\n",
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"\tgit add data/Iris.csv.dvc data/.gitignore\n",
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" git add data/.gitignore data/Iris.csv.dvc\n",
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"\n",
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"To enable auto staging, run:\n",
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"\n",
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"\tdvc config core.autostage true\n",
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"\u001b[0m"
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]
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}
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@ -846,7 +872,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 16,
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"execution_count": 11,
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"id": "74d54652",
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"metadata": {
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"slideshow": {
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@ -863,7 +889,6 @@
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" (use \"git add <file>...\" to include in what will be committed)\r\n",
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"\t\u001b[31mdata/.gitignore\u001b[m\r\n",
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"\t\u001b[31mdata/Iris.csv.dvc\u001b[m\r\n",
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"\t\u001b[31miris.zip\u001b[m\r\n",
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"\r\n",
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"nothing added to commit but untracked files present (use \"git add\" to track)\r\n"
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]
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@ -887,7 +912,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 21,
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"execution_count": 12,
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"id": "460c4a17",
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"metadata": {
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"slideshow": {
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@ -901,7 +926,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 22,
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"execution_count": 13,
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"id": "80644077",
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"metadata": {
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"slideshow": {
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@ -913,10 +938,10 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"[master cc0821a] Dodano dane IRIS (DVC)\r\n",
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" 2 files changed, 5 insertions(+)\r\n",
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" create mode 100644 data/.gitignore\r\n",
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" create mode 100644 data/Iris.csv.dvc\r\n"
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"[master 67214ea] Dodano dane IRIS (DVC)\n",
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" 2 files changed, 5 insertions(+)\n",
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" create mode 100644 data/.gitignore\n",
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" create mode 100644 data/Iris.csv.dvc\n"
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]
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}
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],
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@ -968,7 +993,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 27,
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"execution_count": 16,
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"id": "1d471f3a",
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"metadata": {
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"slideshow": {
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@ -981,7 +1006,7 @@
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"output_type": "stream",
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"text": [
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"total 8\r\n",
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"-r--r--r-- 1 tomek tomek 5107 wrz 19 2019 7820ef0af287ff346c5cabfb4c612c\r\n"
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"-r--r--r-- 1 tomek tomek 5107 Sep 19 2019 7820ef0af287ff346c5cabfb4c612c\r\n"
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]
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}
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],
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@ -991,8 +1016,8 @@
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},
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{
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"cell_type": "code",
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"execution_count": 1,
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"id": "9666e0ae",
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"execution_count": 17,
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"id": "f86a5b55",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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@ -1003,7 +1028,9 @@
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"ls: cannot access './data': No such file or directory\r\n"
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"total 8\r\n",
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"-rw-r--r-- 1 tomek tomek 5107 May 29 09:19 Iris.csv\r\n",
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"-rw-r--r-- 1 tomek tomek 76 May 29 09:19 Iris.csv.dvc\r\n"
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]
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}
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],
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@ -1029,8 +1056,12 @@
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},
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{
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"cell_type": "markdown",
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"id": "5e47dbd3",
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"metadata": {},
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"id": "53429521",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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}
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},
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"source": [
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"Obsługiwane typy zdalnych lokalizacji (remotes): https://dvc.org/doc/command-reference/remote/add#supported-storage-types\n",
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" - Amazon S3\n",
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@ -1049,8 +1080,8 @@
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},
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{
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"cell_type": "code",
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"execution_count": 28,
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"id": "731f6ea4",
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"execution_count": 71,
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"id": "a16f2bfa",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"Setting 'my_local_remote' as a default remote.\r\n",
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"Setting 'my_local_remote' as a default remote.\n",
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"\u001b[0m"
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]
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}
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@ -1072,7 +1103,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 39,
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"execution_count": 25,
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"id": "9c3deeaf",
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"metadata": {
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"slideshow": {
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@ -1085,12 +1116,7 @@
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"output_type": "stream",
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"text": [
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"On branch master\r\n",
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"Changes not staged for commit:\r\n",
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" (use \"git add <file>...\" to update what will be committed)\r\n",
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" (use \"git restore <file>...\" to discard changes in working directory)\r\n",
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"\t\u001b[31mmodified: .dvc/config\u001b[m\r\n",
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"\r\n",
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"no changes added to commit (use \"git add\" and/or \"git commit -a\")\r\n"
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"nothing to commit, working tree clean\r\n"
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]
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}
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],
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@ -1100,7 +1126,7 @@
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},
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{
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"cell_type": "code",
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"execution_count": 41,
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"execution_count": 26,
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"id": "899eac7d",
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"metadata": {
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"slideshow": {
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"name": "stdout",
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"output_type": "stream",
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"text": [
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"[master 3ff62b6] Added DVC remote\r\n",
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" 1 file changed, 4 insertions(+)\r\n"
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"On branch master\r\n",
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"nothing to commit, working tree clean\r\n"
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]
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}
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],
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@ -1137,21 +1163,34 @@
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},
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{
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"cell_type": "code",
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"execution_count": null,
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"execution_count": 28,
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"id": "c7f24f75",
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"metadata": {
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"slideshow": {
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"slide_type": "slide"
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}
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},
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"outputs": [],
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"outputs": [
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{
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"name": "stdout",
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"output_type": "stream",
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"text": [
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" 0% Transferring| |0/1 [00:00<?, ?file/s]\n",
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"!\u001b[A\n",
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" 0%| |7820ef0af287ff346c5cabfb4c612c 0.00/? [00:00<?, ?B/s]\u001b[A\n",
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" 0%| |7820ef0af287ff346c5cabfb4c612c 0.00/4.99k [00:00<?, ?B/s]\u001b[A\n",
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"1 file pushed \u001b[A\n",
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"\u001b[0m"
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]
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}
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],
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"source": [
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"!dvc push"
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]
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},
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||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 33,
|
||||
"execution_count": 31,
|
||||
"id": "8a355575",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1163,8 +1202,8 @@
|
|||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"\u001b[34;42m/dvcstore\u001b[00m\r\n",
|
||||
"└── \u001b[01;34m71\u001b[00m\r\n",
|
||||
"\u001b[34;42m/dvcstore\u001b[0m\r\n",
|
||||
"└── \u001b[01;34m71\u001b[0m\r\n",
|
||||
" └── 7820ef0af287ff346c5cabfb4c612c\r\n",
|
||||
"\r\n",
|
||||
"1 directory, 1 file\r\n"
|
||||
|
|
@ -1204,7 +1243,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 37,
|
||||
"execution_count": 32,
|
||||
"id": "dde39796",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1218,7 +1257,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 42,
|
||||
"execution_count": 33,
|
||||
"id": "7f14ec60",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1241,7 +1280,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 43,
|
||||
"execution_count": 34,
|
||||
"id": "8a841039",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1266,7 +1305,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 44,
|
||||
"execution_count": 35,
|
||||
"id": "bf6c1067",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1278,14 +1317,30 @@
|
|||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"\u001b[2K\u001b[32m⠹\u001b[0m Checking graph \u001b[32m⠋\u001b[0m Checking graph\n",
|
||||
"Adding... \n",
|
||||
"!\u001b[A\n",
|
||||
" 0%| |.TatTHknArFHCT9iDCtxHzh.tmp 0.00/5.07k [00:00<?, ?it/s]\u001b[A\n",
|
||||
"100% Add|██████████████████████████████████████████████|1/1 [00:00, 2.68file/s]\u001b[A\n",
|
||||
" 0% Checking cache in '/home/tomek/repos/aitech-ium/IUM_10/sample-ml-project/.d\u001b[A\n",
|
||||
" \u001b[A\n",
|
||||
"!\u001b[A\n",
|
||||
" 0%| |Transferring 0/1 [00:00<?, ?file/s]\u001b[A\n",
|
||||
" \u001b[A\n",
|
||||
"!\u001b[A\n",
|
||||
" 0%| |.GbNyfXVqWGYkQKjqaSP8tL.tmp 0.00/? [00:00<?, ?B/s]\u001b[A\n",
|
||||
" 0%| |.GbNyfXVqWGYkQKjqaSP8tL.tmp 0.00/4.00 [00:00<?, ?B/s]\u001b[A\n",
|
||||
" \u001b[A\n",
|
||||
"!\u001b[A\n",
|
||||
" 0%| |cff2e578d76852294184c1dce9fdbf 0.00/? [00:00<?, ?B/s]\u001b[A\n",
|
||||
" 0%| |cff2e578d76852294184c1dce9fdbf 0.00/4.95k [00:00<?, ?B/s]\u001b[A\n",
|
||||
"100% Adding...|████████████████████████████████████████|1/1 [00:00, 11.00file/s]\u001b[A\n",
|
||||
"\n",
|
||||
"To track the changes with git, run:\n",
|
||||
"\n",
|
||||
"\tgit add data/Iris.csv.dvc\n",
|
||||
" git add data/Iris.csv.dvc\n",
|
||||
"\n",
|
||||
"To enable auto staging, run:\n",
|
||||
"\n",
|
||||
"\tdvc config core.autostage true\n",
|
||||
"\u001b[0m"
|
||||
]
|
||||
}
|
||||
|
|
@ -1296,7 +1351,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 46,
|
||||
"execution_count": 36,
|
||||
"id": "4a4865c9",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1308,7 +1363,7 @@
|
|||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"[master e38c244] Removed last line from Iris dataset\r\n",
|
||||
"[master d6ff265] Removed last line from Iris dataset\r\n",
|
||||
" 1 file changed, 2 insertions(+), 2 deletions(-)\r\n"
|
||||
]
|
||||
}
|
||||
|
|
@ -1642,7 +1697,7 @@
|
|||
},
|
||||
"source": [
|
||||
"### Lokalnie\n",
|
||||
"Będziemy potrzebować zależności :\n",
|
||||
"Będziemy potrzebować zależności ([szczegóły](https://dvc.org/doc/command-reference/remote/add))\n",
|
||||
" \n",
|
||||
" `conda install dvc-ssh` \n",
|
||||
"\n",
|
||||
|
|
@ -1733,7 +1788,7 @@
|
|||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 27,
|
||||
"execution_count": 65,
|
||||
"id": "e9a04876",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1751,12 +1806,12 @@
|
|||
}
|
||||
],
|
||||
"source": [
|
||||
"!dvc remote add -f -d ium_ssh_remote ssh://ium-sftp@tzietkiewicz.vm.wmi.amu.edu.pl/ium-sftp"
|
||||
"!dvc remote add -f -d ium_ssh_remote ssh://ium-sftp@tzietkiewicz.vm.wmi.amu.edu.pl"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 28,
|
||||
"execution_count": 66,
|
||||
"id": "e3f27bbb",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1769,7 +1824,7 @@
|
|||
"output_type": "stream",
|
||||
"text": [
|
||||
"my_local_remote\t/dvcstore\n",
|
||||
"ium_ssh_remote\tssh://ium-sftp@tzietkiewicz.vm.wmi.amu.edu.pl/ium-sftp\n",
|
||||
"ium_ssh_remote\tssh://ium-sftp@tzietkiewicz.vm.wmi.amu.edu.pl\n",
|
||||
"\u001b[0m"
|
||||
]
|
||||
}
|
||||
|
|
@ -1778,9 +1833,17 @@
|
|||
"!dvc remote list"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "markdown",
|
||||
"id": "c92edd7b",
|
||||
"metadata": {},
|
||||
"source": [
|
||||
"Zapisujemy hasło:"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 9,
|
||||
"execution_count": 67,
|
||||
"id": "5b2fa175",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1792,17 +1855,17 @@
|
|||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
"/bin/bash: dvc: command not found\r\n"
|
||||
"\u001b[0m"
|
||||
]
|
||||
}
|
||||
],
|
||||
"source": [
|
||||
"!dvc remote modify --local ium_ssh_remote password #[hasło takie jak do serwera MLflow ]"
|
||||
"!dvc remote modify --local ium_ssh_remote password IUM@2021"
|
||||
]
|
||||
},
|
||||
{
|
||||
"cell_type": "code",
|
||||
"execution_count": 30,
|
||||
"execution_count": 68,
|
||||
"id": "ea6e16fa",
|
||||
"metadata": {
|
||||
"slideshow": {
|
||||
|
|
@ -1814,10 +1877,7 @@
|
|||
"name": "stdout",
|
||||
"output_type": "stream",
|
||||
"text": [
|
||||
" 0% Uploading| |0/1 [00:00<?, ?file/s]\n",
|
||||
"!\u001b[A\n",
|
||||
" 0%| |data/Iris.csv 0.00/4.95k [00:00<?, ?B/s]\u001b[A\n",
|
||||
"1 file pushed \u001b[A\n",
|
||||
"Everything is up to date. \n",
|
||||
"\u001b[0m"
|
||||
]
|
||||
}
|
||||
|
|
@ -1877,7 +1937,7 @@
|
|||
"celltoolbar": "Slideshow",
|
||||
"email": "tomasz.zietkiewicz@amu.edu.pl",
|
||||
"kernelspec": {
|
||||
"display_name": "Python 3",
|
||||
"display_name": "Python 3 (ipykernel)",
|
||||
"language": "python",
|
||||
"name": "python3"
|
||||
},
|
||||
|
|
@ -1892,7 +1952,7 @@
|
|||
"name": "python",
|
||||
"nbconvert_exporter": "python",
|
||||
"pygments_lexer": "ipython3",
|
||||
"version": "3.6.9"
|
||||
"version": "3.10.4"
|
||||
},
|
||||
"slideshow": {
|
||||
"slide_type": "slide"
|
||||
|
|
|
|||
Loading…
Reference in New Issue