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https://github.com/andre-wojtowicz/blas-benchmarks
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init install-env
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install-env.sh
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42
install-env.sh
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#!/bin/bash
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WGET_OPTIONS="--no-check-certificate"
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MRO_VERSION="3.2.4"
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# update debian repos & upgrade packages
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sed -i -e 's/ftp.debian.org/ftp.pl.debian.org/ig' /etc/apt/sources.list
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sed -i -e 's/wheezy/jessie/ig' /etc/apt/sources.list
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apt-get update
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DEBIAN_FRONTEND=noninteractive apt-get -y -o Dpkg::Options::="--force-confdef" -o Dpkg::Options::="--force-confnew" upgrade
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# install new packages for R
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apt-get -y install build-essential gfortran ed htop libxml2-dev ca-certificates curl libcurl4-openssl-dev gdebi-core sshpass
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# hack with Microsoft R Open deps
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wget ${WGET_OPTIONS} http://ftp.pl.debian.org/debian/pool/main/libj/libjpeg8/libjpeg8_8d1-2_amd64.deb
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gdebi -n libjpeg8_8d1-2_amd64.deb
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rm libjpeg8_8d1-2_amd64.deb
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# install Microsoft R Open
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wget ${WGET_OPTIONS} https://mran.microsoft.com/install/mro/${MRO_VERSION}/MRO-${MRO_VERSION}-Ubuntu-15.4.x86_64.deb
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gdebi -n MRO-${MRO_VERSION}-Ubuntu-15.4.x86_64.deb
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rm MRO-${MRO_VERSION}-Ubuntu-15.4.x86_64.deb
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# update R repository url
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sed -i -e 's/mran.revolutionanalytics.com/mran.microsoft.com/ig' /usr/lib64/MRO-${MRO_VERSION}/R-${MRO_VERSION}/lib/R/etc/Rprofile.site
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# update R reposritory snapshot day
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sed -i -e 's/2016-01-01/2016-04-10/ig' /usr/lib64/MRO-${MRO_VERSION}/R-${MRO_VERSION}/lib/R/etc/Rprofile.site
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# install RevoMathUtils
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wget ${WGET_OPTIONS} https://mran.microsoft.com/install/mro/${MRO_VERSION}/RevoMath-${MRO_VERSION}.tar.gz
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tar -xvzf RevoMath-${MRO_VERSION}.tar.gz
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cd RevoMath
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sed -i '16,18d' RevoMath.sh
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echo 1 | ./RevoMath.sh
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cd ..
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rm -r RevoMath*
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