knotkit/Makefile

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Makefile
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BISON = /opt/local/bin/bison
FLEX = /opt/local/bin/flex
# CXX = g++
# CXX = mpic++
CXX = clang++ -fno-color-diagnostics --stdlib=libc++ --std=c++11
INCLUDES = -I/opt/local/include -I.
OPTFLAGS = -g
# OPTFLAGS = -O2 -g
# OPTFLAGS = -O2 -DNDEBUG
LDFLAGS = -L/opt/local/lib
# LDFLAGS = -pg -L/opt/local/lib
CXXFLAGS = $(OPTFLAGS) -Wall -Wno-unused $(INCLUDES)
LIB_OBJS = lib/refcount.o \
lib/lib.o lib/smallbitset.o lib/bitset.o lib/setcommon.o lib/io.o lib/directed_multigraph.o
ALGEBRA_OBJS = algebra/algebra.o algebra/grading.o algebra/polynomial.o
KNOTKIT_OBJS = planar_diagram.o dt_code.o knot_diagram.o cube.o steenrod_square.o \
spanning_tree_complex.o \
smoothing.o cobordism.o knot_tables.o sseq.o \
knot_parser/knot_parser.o knot_parser/knot_scanner.o \
rd_parser/rd_parser.o rd_parser/rd_scanner.o
COMMON_OBJS = $(KNOTKIT_OBJS) $(ALGEBRA_OBJS) $(LIB_OBJS)
LIB_HEADERS = lib/lib.h lib/show.h lib/refcount.h lib/pair.h lib/maybe.h lib/vector.h \
lib/set_wrapper.h lib/set.h lib/hashset.h \
lib/ullmanset.h lib/bitset.h lib/smallbitset.h lib/setcommon.h \
lib/map_wrapper.h lib/map.h lib/hashmap.h lib/ullmanmap.h lib/mapcommon.h \
lib/unionfind.h lib/priority_queue.h lib/io.h \
lib/directed_multigraph.h
ALGEBRA_HEADERS = algebra/algebra.h algebra/grading.h algebra/module.h \
algebra/Z2.h algebra/linear_combination.h \
algebra/Z.h algebra/Zp.h algebra/Q.h \
algebra/polynomial.h algebra/multivariate_polynomial.h \
algebra/multivariate_laurentpoly.h algebra/fraction_field.h
KNOTKIT_HEADERS = knotkit.h planar_diagram.h dt_code.h knot_diagram.h \
smoothing.h cobordism.h cube.h steenrod_square.h \
spanning_tree_complex.h cube_impl.h sseq.h simplify_chain_complex.h
LIBS = -lgmp -lz
all: gss
%.o : %.cc
$(CXX) -c $(CXXFLAGS) $< -o $@
%.o : %.cpp
$(CXX) -c $(CXXFLAGS) $< -o $@
gss: gss.o $(COMMON_OBJS)
$(CXX) $(LDFLAGS) -o gss $^ $(LIBS)
main: main.o $(COMMON_OBJS)
$(CXX) $(LDFLAGS) -o main $^ $(LIBS)
mpimain: mpimain.o mpi_aux.o $(COMMON_OBJS)
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$(CXX) $(LDFLAGS) -o mpimain $^ $(LIBS)
testlib: testlib.o $(COMMON_OBJS)
$(CXX) $(LDFLAGS) -o testlib $^
knot_parser/knot_parser.cc knot_parser/knot_parser.hh: knot_parser/knot_parser.yy
$(BISON) knot_parser/knot_parser.yy -o knot_parser/knot_parser.cc
knot_parser/knot_scanner.cc: knot_parser/knot_scanner.ll
$(FLEX) -o knot_parser/knot_scanner.cc knot_parser/knot_scanner.ll
javakh_parser/javakh_parser.cc javakh_parser/javakh_parser.hh: javakh_parser/javakh_parser.yy
$(BISON) javakh_parser/javakh_parser.yy -o javakh_parser/javakh_parser.cc
javakh_parser/javakh_scanner.cc: javakh_parser/javakh_scanner.ll
$(FLEX) -o javakh_parser/javakh_scanner.cc javakh_parser/javakh_scanner.ll
rd_parser/rd_parser.cc rd_parser/rd_parser.hh: rd_parser/rd_parser.yy
$(BISON) rd_parser/rd_parser.yy -o rd_parser/rd_parser.cc
rd_parser/rd_scanner.cc: rd_parser/rd_scanner.ll
$(FLEX) -o rd_parser/rd_scanner.cc rd_parser/rd_scanner.ll
.PHONY: parser_files
parser_files: \
knot_parser/knot_parser.cc knot_parser/knot_parser.hh \
knot_parser/knot_scanner.cc \
javakh_parser/javakh_parser.cc javakh_parser/javakh_parser.hh \
javakh_parser/javakh_scanner.cc \
rd_parser/rd_parser.cc rd_parser/rd_parser.hh \
rd_parser/rd_scanner.cc
.PHONY: clean
clean:
rm -f *.o lib/*.o algebra/*.o knot_parser/*.o rd_parser/*.o
rm -f main gss
rm -f gmon.out
.PHONY: realclean
realclean: clean
rm -f knot_parser/knot_parser.cc knot_parser/knot_parser.hh
rm -f knot_parser/knot_scanner.cc
rm -f knot_parser/location.hh knot_parser/position.hh knot_parser/stack.hh
rm -f javakh_parser/javakh_parser.cc javakh_parser/javakh_parser.hh
rm -f javakh_parser/javakh_scanner.cc
rm -f javakh_parser/location.hh javakh_parser/position.hh javakh_parser/stack.hh
rm -f rd_parser/rd_parser.cc rd_parser/rd_parser.hh
rm -f rd_parser/rd_scanner.cc
rm -f rd_parser/location.hh rd_parser/position.hh rd_parser/stack.hh
$(LIB_OBJS): $(LIB_HEADERS)
$(ALGEBRA_OBJS): $(ALGEBRA_HEADERS) $(LIB_HEADERS)
$(KNOTKIT_OBJS) main.o mpimain.o gss.o: $(KNOTKIT_HEADERS) $(ALGEBRA_HEADERS) $(LIB_HEADERS)
mpimain.o mpi_aux.o: mpi_aux.h