Detection-of-plant-diseases/file_manager/data_manager.py
2024-05-06 00:07:09 +02:00

113 lines
5.4 KiB
Python

import argparse
import glob
import os
import shutil
from pathlib import Path
from zipfile import ZipFile
import cv2
import wget
main_path = Path("data/")
path_to_train_and_valid = main_path / "%s/**/*.*"
original_dataset_name = "original_dataset"
parser = argparse.ArgumentParser()
parser.add_argument("--download", action="store_true",
help="Download the data")
parser.add_argument("--resize", action="store_true",
help="Resize the dataset")
parser.add_argument("--shape", type=int, nargs="+", default=(64, 64),
help="Shape of the resized images. Applied only for resize option. Default: (64, 64)")
parser.add_argument("--sobel", action="store_true",
help="Apply Sobel filter to the dataset")
parser.add_argument("--source", type=str, default="original_dataset",
help="Name of the source dataset. Applied for all arguments except download. Default: original_dataset")
args = parser.parse_args()
class DataManager:
def download_data(self):
if not os.path.isfile("archive.zip"):
wget.download("https://storage.googleapis.com/kaggle-data-sets/78313/182633/bundle/archive.zip?X-Goog-Algorithm=GOOG4-RSA-SHA256&X-Goog-Credential=gcp-kaggle-com%40kaggle-161607.iam.gserviceaccount.com%2F20240502%2Fauto%2Fstorage%2Fgoog4_request&X-Goog-Date=20240502T181500Z&X-Goog-Expires=259200&X-Goog-SignedHeaders=host&X-Goog-Signature=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")
def unzip_data(self, file_name, path_to_extract):
full_path_to_extract = main_path / path_to_extract
old_path = "New Plant Diseases Dataset(Augmented)/New Plant Diseases Dataset(Augmented)"
if not os.path.exists(main_path):
os.makedirs(main_path)
ZipFile(file_name).extractall(full_path_to_extract)
# shutil.move("data/test/test",
# full_path_to_extract, copy_function=shutil.copytree)
shutil.move(full_path_to_extract / old_path / "train",
full_path_to_extract / "train", copy_function=shutil.copytree)
shutil.move(full_path_to_extract / old_path / "valid",
full_path_to_extract / "valid", copy_function=shutil.copytree)
shutil.rmtree(
full_path_to_extract / "New Plant Diseases Dataset(Augmented)"
)
shutil.rmtree(
full_path_to_extract / "new plant diseases dataset(augmented)"
)
shutil.rmtree(full_path_to_extract / "test")
self.get_test_ds_from_validation()
def write_image(self, image, path):
os.makedirs(path.rsplit('/', 1)[0], exist_ok=True)
cv2.imwrite(path, image)
def get_test_ds_from_validation(self, files_per_category: int = 2):
path_to_extract = main_path / original_dataset_name
valid_ds = glob.glob(str(path_to_extract / "valid/*/*"))
category_dirs = set([category_dir.split("/")[-2]
for category_dir in valid_ds])
category_lists = {category: [] for category in category_dirs}
for file_path in valid_ds:
category = file_path.split("/")[-2]
category_lists[category].append(file_path)
test_dir = path_to_extract / "test"
if not os.path.exists(test_dir):
os.makedirs(test_dir, exist_ok=True)
for category, files in category_lists.items():
os.makedirs(test_dir / category, exist_ok=True)
files.sort()
for file in files[:files_per_category]:
shutil.move(file, test_dir / category)
def resize_dataset(self, source_dataset_name, shape):
dataset_name = "resized_dataset"
if not os.path.exists(main_path / dataset_name):
for file in glob.glob(str(path_to_train_and_valid) % source_dataset_name, recursive=True):
path_to_file = file.replace("\\", "/")
image = cv2.imread(path_to_file)
image = cv2.resize(image, shape)
new_path = path_to_file.replace(
source_dataset_name, dataset_name)
self.write_image(image, new_path)
def sobelx(self, source_dataset_name):
dataset_name = "sobel_dataset"
if not os.path.exists(main_path / dataset_name):
for file in glob.glob(str(path_to_train_and_valid) % source_dataset_name, recursive=True):
path_to_file = file.replace("\\", "/")
image = cv2.imread(path_to_file)
sobel = cv2.Sobel(image, cv2.CV_64F, 1, 0, ksize=5)
new_path = path_to_file.replace(
source_dataset_name, dataset_name)
self.write_image(sobel, new_path)
if __name__ == "__main__":
data_manager = DataManager()
if args.download:
data_manager.download_data()
data_manager.unzip_data("archive.zip", original_dataset_name)
if args.resize:
data_manager.resize_dataset(args.source, tuple(args.shape))
if args.sobel:
data_manager.sobelx(args.source)